On the accuracy of molecular properties by coupled-cluster methods for some difficult examples: Oxygen atom,iron atom,and cyano radical

Coupled-cluster (CC ) methods at the level of CCSD , CCSD +T (CCSD ), CCSD (T ), CCSDT -1, and CCSDT -3 are applied to calculations of the dipole moment and polarizability of the CN molecule, ionization potentials and electron affinities of the oxygen and iron atoms and CN molecule, and the energy splitting of the ⁵D and ⁵F states of the iron atom. Both UHF and ROHF references are applied. Extended basis sets are used in some comparison of CC data to experiment. All calculated atomic and molecular properties are known as challenging problems, suitable for a careful analysis of the performance of sophisticated versions of the CC approach. Attention is paid to energy terms distinguishing CCSD (T ) from CCSD +T (CCSD ). We exploit results from various iterative and noniterative high-level CC methods in the assessment of error bars in calculations of atomic and molecular properties. © 1994 John Wiley & Sons, Inc.     

Fourth-order diagrammatic MB-RSPT calculations of the interaction energy between two helium atoms

The efficiency of the MB-RSPT in the calculations of the correlation contributions to the interaction energies was investigated, using He₂ as a model Van der Waals system. The attention has been focused on the convergency of the perturbation expansion in the calculations of the interaction energy and on the analysis of the fourth-order terms of MB-RSPT. The rôle of the renormalization term in the correct long-range behaviour of the interaction potential has been emphasized.     

Bio-compatible in-tube solid-phase microextraction capillary for the direct extraction and high-performance liquid chromatographic determination of drugs in human serum

A restricted access material (RAM), alkyl-diol-silica (ADS), was used to prepare a highly bio-compatible solid-phase microextraction (SPME) capillary for the automated and direct in-tube extraction of several benzodiazepines from human serum. The bifunctionality of the ADS extraction phase prevented fouling of the capillary by protein adsorption while simultaneously trapping the analytes in the hydrophobic porous interior. This the first report of a restricted access material utilized as an extraction phase for in-tube SPME. The approach simplified the required apparatus in comparison to existing RAM column switching procedures, and more importantly eliminated the excessive use of extraction solvents. The biocompatibility of the ADS material also overcame the existing problems with in-tube SPME that requires an ultrafiltration or other deproteinization step prior to handling biological samples, therefore further minimizing the sample preparation requirements. The calculated oxazepam, temazepam, nordazepam and diazepam detection limits were 26, 29, 22 and 24 ng/ml in serum, respectively. The method was linear over the range of 50-50 000 ng/ml with an average linear coefficient (R2) value of 0.9998. The injection repeatability and intra-assay precision of the method were evaluated with five injections of a 10-microg/ml serum sample (spiked with all compounds), resulting in an average RSD<7%. The ADS extraction column was robust, providing many direct injections of biological fluids for the extraction and subsequent determination of benzodiazepines.     

Accurate electrical and spectroscopic properties ofX 1Σ+ BeO from coupled-cluster methods

Summary This paper reports a series of coupled-cluster (CC) calculations through CCSDT on the theoretically challenging ground state of the BeO molecule. Along with CC methods, quadratic configuration interaction (QCI) approximations to CC theory have been used (QCISD and QCISD(T)), which show several dramatic failings. Equilibrium electrical properties (, _xx , and _zz ) and basic spectroscopic properties (r _e, _e,D _e, and infrared intensity (I)) have been computed. Basis set and electron correlation effects are analyzed in order to arrive at accurate values of the dipole moment and polarizability, which are not known experimentally. For the dipole moment, we obtain a value of 6.25 D, with an uncertainty of about 0.1 D. For _xx and _zz , we suggest respective values of 32 and 36 atomic units (a.u.) and error bars of about 1 and 2 a.u. With extended basis sets, the spectroscopic propertiesr _e, _e, andD _e are reproduced to high accuracy, which is the first time this has been achieved for this species byab initio methods. At the highest calculation levels,I is predicted to be very small. AlthoughI has not been measured, some support for this prediction comes from a recent infrared study of BeO-rare gas complexes. The QCI methods are shown to be much more sensitive to basis set, and even with large basis sets yield values of _zz andI which differ from CC results by an order of magnitude and three orders of magnitude, respectively. These differences doubtless arise from the importance of single excitations (T ₁) for this molecule, as several terms involvingT ₁ are neglected in the QCISD approximation compared with CCSD. We also report CC calculations with Brueckner orbitals, which yield results similar to those obtained with restricted Hartree-Fock orbitals.     

Advanced approaches for the characterization of a de novo designed antiparallel coiled coil peptide

We report here an advanced approach for the characterization of the folding pattern of a de novo designed antiparallel coiled coil peptide by high-resolution methods. Incorporation of two fluorescence labels at the C- and N-terminus of the peptide chain as well as modification of two hydrophobic core positions by Phe/[15N,13C]Leu enable the study of the folding characteristics and of distinct amino acid side chain interactions by fluorescence resonance energy transfer (FRET) and NMR spectroscopy. Results of both experiments reveal the antiparallel alignment of the helices and thus prove the design concept. This finding is also supported by molecular dynamics simulations. Electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry (ESI-FTICR-MS) in combination with NMR experiments was used for verification of the oligomerization equilibria of the coiled coil peptide.     

Procedure for background estimation in energy-dispersive X-ray fluorescence spectra

A method for semi-automatic background estimation in energy-dispersive x-ray fluorescence spectra is outlined. Two cubic splines were investigated and the spline called the Butland interpolant was chosen for further investigation. Prior to the calculation of the spline, peak regions are set up, and suitable knots are defined outside the peak regions. To set up the peak regions, an automatic peak-search routine and a calibration equation are used. For a given peak, the latter relates the full width at half maximum (FWHM) to the peak centre. In turn, the size of the peak regions are defined by the FWHM multiplied by a constant given by the user. The method was tested on several types of spectra. It was found that the optimal size of the peak region decreased with increasing peak density. Reproducibility tests showed that the standard deviation of the summation of counts within a peak region and after background subtraction was less than would be expected from the counting statistics.     

Stimuli-responsive surface crystallization of phospholipids from bimodal colloidal particles

These studies focus on the effect of phospholipids in the presence of ionic surfactants on the behavior of poly(methylmethactrylate/n-butyl acrylate) (p-MMA/nBA) colloidal particles during film formation. With the presence of two surfactants, it is possible to obtain particles that exhibit two distinct particle sizes. The presence of hydrogenated soybean phosphatidylcholine (HSPC) and sodium dioctyl sulfosuccinate (SDOSS), which stabilize these bimodal colloidal dispersions, has a significant effect on the mobility of individual components during coalescence. Specifically, the presence of HSPC inhibits migration of SDOSS to the film-air (F-A) interface. Furthermore, the presence of electrolyte species such as aqueous CaCl2 has a very pronounced effect on film formation. When the Ca2+/HSPC ratio is 0.1/1.0, SDOSS is released to the F-A interface during coalescence. At 2.0/1.0 Ca2+/HSPC, HSPC diffuses to the F-A interface and crystalline domains consisting of HSPC are formed. This stimuli-responsive behavior is confirmed using IRIR imaging that ultimately exhibits different surface morphologies. These studies illustrate for the first time that it is possible to control the release of two different surface-active species during coalescence that form crystalline domains.     

IR laser induced UV fluorescence in nitric oxide

We observe UV fluorescence from a gas cell containing NO and Ar, when irradiated by a CO laser line, coincident with an NO fundamental. The power density generated cw by the CO laser does not exceed 1 $\text{kW}\text{cm}{}^2$ in the focal area. It is suggested that V-V pumping is responsible for exciting the NO X ²Π up to υ ≈ 30 from where collisional transfer into A ²Σ and B ²Π is possible.