High Accuracy Protein Structures from Minimal Sparse Paramagnetic Solid‐State NMR Restraints

There is a pressing need for new computational tools to integrate data from diverse experimental approaches in structural biology. We present a strategy that combines sparse paramagnetic solid‐state NMR restraints with physics‐based atomistic simulations. Our approach explicitly accounts for uncertainty in the interpretation of experimental data through the use of a semi‐quantitative mapping between the data and the restraint energy that is calibrated by extensive simulations. We apply our approach to solid‐state NMR data for the model protein GB1 labeled with Cu²⁺‐EDTA at six different sites. We are able to determine the structure to 0.9 Å accuracy within a single day of computation on a GPU cluster. We further show that in some cases, the data from only a single paramagnetic tag are sufficient for accurate folding.     

Investigation of Ti/CuO interface by X-ray photoelectron spectroscopy and atomic force microscopy

The Ti/CuO interface has been studied by the techniques of X-ray photoelectron spectroscopy and atomic force microscopy. Thin films of titanium were deposited on a CuO substrate at room temperature by the e-beam technique. The photoelectron spectra of titanium and copper were found to exhibit significant chemical interaction at the interface. The titanium overlayer was observed to get oxidized to TiO₂, while the CuO was observed to get reduced to elemental copper. This chemical interaction was observed to occur until a thickness of 7 nm of the titanium overlayer. For thicknesses greater than this value, the presence of unreacted titanium in the sample was detected. Barrier characteristics at the Ti/CuO interface were also carried out for substrate temperatures of 300°C, 400°C, 500°C, and 600°C as a function of the titanium overlayer thickness. A linear trend in the barrier thickness of the overlayer was observed between 400°C and 600°C substrate temperatures. The atomic force microscopy micrographs of the unannealed samples depicted layer-by-layer growth of elemental titanium on copper. At the Ti/CuO interface in such samples, the micrographs exhibited island formation of TiO₂ corresponding to the Volmer-Weber growth model. This formation has been interpreted as the relaxation in the strain energy. The percentage coverage of the underlying substrate by the TiO₂ islands showed a linear trend for the thicknesses of the titanium overlayer investigated. The average size of these islands also showed a linear trend as a function of the thickness of the overlayer.     

Scattering-free plasmonic optics with anisotropic metamaterials

We develop an approach to utilize anisotropic metamaterials to solve one of the fundamental problems of modern plasmonics--parasitic scattering of surface waves into free-space modes, opening the road to truly two-dimensional plasmonic optics. We illustrate the developed formalism on the examples of plasmonic refractor and plasmonic crystal, and discuss limitations of the developed technique and its possible applications for sensing and imaging structures, high-performance mode couplers, optical cloaking structures, and dynamically reconfigurable electroplasmonic circuits.     

A localization algorithm based on head-related transfer functions

Two sound localization algorithms based on the head-related transfer function were developed. Each of them uses the interaural time delay, interaural level difference, and monaural spectral cues to estimate the location of a sound source. Given that most localization algorithms will be required to function in background noise, the localization performance of one of the algorithms was tested at signal-to-noise ratios (SNRs) from 40 to -40 dB. Stimuli included ten real-world, broadband sounds located at 5 degrees intervals in azimuth and at 0 degrees elevation. Both two- and four-microphone versions of the algorithm were implemented to localize sounds to 5 degrees precision. The two-microphone version of the algorithm exhibited less than 2 degrees mean localization error at SNRs of 20 dB and greater, and the four-microphone version committed approximately 1 degrees mean error at SNRs of 10 dB or greater. Potential enhancements and applications of the algorithm are discussed.     

Effect of Mo–Fe substitution on glass forming ability and thermal stability of Fe–C–B–Mo–Cr–W bulk amorphous alloys

Amorphous Fe_67?xC₁₀B₉Mo_7+xCr₄W₃ (x = 1–7 at.%) plates with 0.64 mm thickness were prepared by copper mold casting. The thermal properties and microstructural development during heat treatments were investigated by a combination of differential scanning calorimetry, differential thermal analysis, and X-ray diffraction. The glass forming ability (GFA) and activation energy for crystallization have a distinct dependence on Mo content. Fe₆₂C₁₀B₉Mo₁₂Cr₄W₃ was the best glass former in this study, demonstrating a supercooled liquid region, ΔT_x = 51 K, and an activation energy for crystallization, Q = 453 kJ/mol. The GFA of alloys in this system was governed by elastic strain optimization resulting directly from the variation in Mo content. Heat treatments were performed to demonstrate resistance to crystallization under typical processing conditions. Alloys in this system exhibited a three phased evolution during crystallization. A second set of heat treatments was performed to identify each phase. An analysis of phase evolution revealed a distinct dependence of phase evolution with stepwise substitution of Mo for Fe in this system.     

Desingularization of a Steady Vortex Pair in the Lake Equation

Potential Analysis - We construct a family of steady solutions of the lake model perturbed by some small Coriolis force, that converge to a singular vortex pair. The desingularized solutions are...     

Unprecedented Oxidative Addition and Metal‐Only Lewis Pair Chemistry of Antimony Trihalides

Reaction of the zero‐valent platinum complex [Pt(PCy₃)₂] with SbF₃ generates the cationic diplatinum stibenium complex [{(Cy₃P)₂Pt}₂(μ‐SbF₂)]⁺, the first unsupported metal‐only Lewis pair containing an antimony‐centered Lewis acid. In contrast, SbCl₃ undergoes oxidative addition to [Pt(PCy₃)₂], resulting in the dihalostibanyl complex trans‐[PtCl(SbCl₂)(PCy₃)₂], the first example of oxidative addition of an antimony–halide bond to a transition metal.     

Kβ X-Ray Emission Spectroscopic Study of a Second-Row Transition Metal (Mo) and Its Application to Nitrogenase-Related Model Complexes

In recent years, X-ray emission spectroscopy (XES) in the Kβ (3p-1s) and valence-to-core (valence-1s) regions has been increasingly used to study metal active sites in (bio)inorganic chemistry and catalysis, providing information about the metal spin state, oxidation state and the identity of coordinated ligands. However, to date this technique has been limited almost exclusively to first-row transition metals. In this work, we present an extension of Kβ XES (in both the 4p-1s and valence-to-1s [or VtC] regions) to the second transition row by performing a detailed experimental and theoretical analysis of the molybdenum emission lines. It is demonstrated in this work that Kβ₂ lines are dominated by spin state effects, while VtC XES of a 4d transition metal provides access to metal oxidation state and ligand identity. An extension of Mo Kβ XES to nitrogenase-relevant model complexes shows that the method is sufficiently sensitive to act as a spectator probe for redox events that are localized at the Fe atoms. Mo VtC XES thus has promise for future applications to nitrogenase, as well as a range of other Mo-containing biological cofactors. Further, the clear assignment of the origins of Mo VtC XES features opens up the possibility of applying this method to a wide range of second-row transition metals, thus providing chemists with a site-specific tool for the elucidation of 4d transition metal electronic structure.