Superchiral Pd3L6 Coordination Complex and Its Reversible Structural Conversion into Pd3L3Cl6 Metallocycles

Large, non‐symmetrical, inherently chiral bispyridyl ligand L derived from natural ursodeoxycholic bile acid was used for square–planar coordination of tetravalent Pd^II, yielding the cationic single enantiomer of superchiral coordination complex 1 Pd₃ L ₆ containing 60 well‐defined chiral centers in its flower‐like structure. Complex 1 can readily be transformed by addition of chloride into a smaller enantiomerically pure cyclic trimer 2 Pd₃ L ₃Cl₆ containing 30 chiral centers. This transformation is reversible and can be restored by the addition of silver cations. Furthermore, a mixture of two constitutional isomers of trimer, 2 and 2′ , and dimer, 3 and 3′ , can be obtained directly from L by its coordination to trans‐ or cis‐N‐pyridyl‐coordinating Pd^II. These intriguing, water‐resistant, stable supramolecular assemblies have been thoroughly described by ¹H DOSY NMR, mass spectrometry, circular dichroism, molecular modelling, and drift tube ion‐mobility mass spectrometry.     

Normal mode analysis of molecular motions in curvilinear coordinates on a non-Eckart body-frame: an application to protein torsion dynamics

Normal mode analysis (NMA) was introduced in 1930s as a framework to understand the structure of the observed vibration-rotation spectrum of several small molecules. During the past three decades NMA has also become a popular alternative to figuring out the large-scale motion of proteins and other macromolecules. However, the “standard” NMA is based on approximations, which sometimes are unphysical. Especially problematic is the assumption that atoms move only “infinitesimally”, which, of course, is an oxymoron when large amplitude motions are concerned. The “infinitesimal” approximation has the further unfortunate side effect of masking the physical importance of the coupling between vibrational and rotational degrees of freedom. Here, we present a novel formulation of the NMA, which is applied for finite motions in non-Eckart body-frame. Contrary to standard normal mode theory, our approach starts by assuming a harmonic potential in generalized coordinates, and tries to avoid the linearization of the coordinates. It also takes explicitly into account the Coriolis terms, which couple vibrations and rotations, and the terms involving Christoffel symbols, which are ignored by default in the standard NMA. We also computationally explore the effect of various terms to the solutions of the NMA equation of motions.     

Preparation of Langmuir/Blodgett-cellulose Surfaces by Using Horizontal Dipping Procedure. Application for Polyelectrolyte Adsorption Studies Performed with QCM-D

A method of preparing model cellulose surfaces by the Langmuir–Blodgett (LB) technique with horizontal dipping procedure has been developed. The primary aim for the use of these surfaces was adsorption studies performed with the quartz crystal microbalance with dissipation (QCM-D) instrument. Hydrophobised cellulose (trimethylsilyl cellulose, TMSC) was deposited on the hydrophobic, polystyrene-coated QCM-D crystal. After 15 dipping cycles, the TMSC film fully covers the crystal surface. TMSC can easily be hydrolysed back to cellulose with acid hydrolysis. With this method a smooth, rigid, thin and reproducible cellulose film was obtained. Its morphology, coverage, chemical composition and wetting was further characterised using atomic force microscopy (AFM), X-Ray photoelectron spectroscopy (XPS), and contact angle measurements. The swelling behaviour and the stability of the cellulose film in aqueous solutions at different ionic strengths were studied using the QCM-D instrument. The swelling/deswelling properties of the cellulose film were those expected of polyelectrolytes with low charge density; some swelling occurred in pure water and the swelling decreased when the ionic strength was increased. No significant layer softening was detected during the swelling. The effect of electrolyte concentration and polymer charge density on the adsorption of cationic polyelectrolytes on the cellulose surface was also investigated. At low electrolyte concentration less of the highly charged PDADMAC was adsorbed as compared to low charged C-PAM. The adsorbed amount of PDADMAC increased with increasing ionic strength and a more compact layer was formed while the effect of electrolyte concentration on the adsorption of C-PAM was not as pronounced.     

A Comparative Study of Pyrolysis Liquids by Slow Pyrolysis of Industrial Hemp Leaves,Hurds and Roots

This study assessed the pyrolysis liquids obtained by slow pyrolysis of industrial hemp leaves, hurds, and roots. The liquids recovered between a pyrolysis temperature of 275–350 °C, at two condensation temperatures 130 °C and 70 °C, were analyzed. Aqueous and bio-oil pyrolysis liquids were produced and analyzed by proton nuclear magnetic resonance (NMR), gas chromatography–mass spectrometry (GC-MS), and atmospheric pressure photoionization Fourier transform ion cyclotron resonance mass spectrometry (APPI FT-ICR MS). NMR revealed quantitative concentrations of the most abundant compounds in the aqueous fractions and compound groups in the oily fractions. In the aqueous fractions, the concentration range of acetic acid was 50–241 gL⁻¹, methanol 2–30 gL⁻¹, propanoic acid 5–20 gL⁻¹, and 1-hydroxybutan-2-one 2 gL⁻¹. GC-MS was used to compare the compositions of the volatile compounds and APPI FT-ICR MS was utilized to determine the most abundant higher molecular weight compounds. The different obtained pyrolysis liquids (aqueous and oily) had various volatile and nonvolatile compounds such as acetic acid, 2,6-dimethoxyphenol, 2-methoxyphenol, and cannabidiol. This study provides a detailed understanding of the chemical composition of pyrolysis liquids from different parts of the industrial hemp plant and assesses their possible economic potential.     

Elliptic boundary value problems with Gaussian white noise loads

Linear second order elliptic boundary value problems (BVP) on bounded Lipschitz domains are studied in the case of Gaussian white noise loads. The challenging cases of Neumann and Robin BVPs are considered.The main obstacle for usual variational methods is the irregularity of the load. In particular, the Neumann boundary values are not well-defined.In this work, the BVP is formulated by replacing the continuity of boundary trace mappings with measurability. Instead of variational methods alone, the novel BVP derives also from Cameron–Martin space techniques.The new BVP returns the study of irregular white noise to the study of $L^2$-loads.     

Chemoenzymatic Hydrogen Production from Methanol through the Interplay of Metal Complexes and Biocatalysts

Microbial methylotrophic organisms can serve as great inspiration in the development of biomimetic strategies for the dehydrogenative conversion of C₁ molecules under ambient conditions. In this Concept article, a concise personal perspective on the recent advancements in the field of biomimetic catalytic models for methanol and formaldehyde conversion, in the presence and absence of enzymes and co-factors, towards the formation of hydrogen under ambient conditions is given. In particular, formaldehyde dehydrogenase mimics have been introduced in stand-alone C₁-interconversion networks. Recently, coupled systems with alcohol oxidase and dehydrogenase enzymes have been also developed for in situ formation and decomposition of formaldehyde and/or reduced/oxidized nicotinamide adenine dinucleotide (NADH/ NAD⁺). Although C₁ molecules are already used in many industries for hydrogen production, these conceptual bioinspired low-temperature energy conversion processes may lead one day to more efficient energy storage systems enabling renewable and sustainable hydrogen generation for hydrogen fuel cells under ambient conditions using C₁ molecules as fuels for mobile and miniaturized energy storage solutions in which harsh conditions like those in industrial plants are not applicable.     

UV‐Vis Spectroscopy Reveals a Correlation Between Y263 and BV Protonation States in Bacteriophytochromes

Red‐light photosensory proteins, phytochromes, link light activation to biological functions by interconverting between two conformational states. For this, they undergo large‐scale secondary and tertiary changes which follow small‐scale Z to E bond photoisomerization of the covalently bound bilin chromophore. The complex network of amino acid interactions in the chromophore‐binding pocket plays a central role in this process. Highly conserved Y263 and H290 have been found to be important for the photoconversion yield, while H260 has been identified as important for bilin protonation and proton transfer steps. Here, we focus on the roles these amino acids are playing in preserving the chemical properties of bilin in the resting Pr state of the photosensory unit of a bacteriophytochrome from Deinococcus radiodurans. By using pH‐dependent UV‐Vis spectroscopy and spectral decomposition modeling, we confirm the importance of H260 for biliverdin protonation. Further, we demonstrate that in the canonical bacteriophytochromes, the pK_a value of the phenol group of the Y263 is uncommonly low. This directly influences the protonation of the bilin molecule and likely the functional properties of the protein. Our study expands the understanding of the tight interplay between the nearby amino acids and bilin in the phytochrome family.     

Ultrafast energy transfer dynamics of a bioinspired dyad molecule

A caroteno-purpurin dyad molecule was studied by steady-state and pump-probe spectroscopies to resolve the excited-state deactivation dynamics of the different energy levels as well as the connecting energy flow pathways and corresponding rate constants. The data were analyzed with a two-step multi-parameter global fitting procedure that makes use of an evolutionary algorithm. We found that following ultrafast excitation of the donor (carotenoid) chromophore to its S2 state, the energy flows via two channels: energy transfer (70%) and internal conversion (30%) with time constants of 54 and 110 fs, respectively. Additionally, some of the initial excitation is found to populate the hot ground state, revealing another limitation to the functional efficiency. At later times, a back transfer occurs from the purpurin to the carotenoid triplet state in nanosecond timescales. Details of the energy flow within the dyad as well as species associated spectra are disentangled for all excited-state and ground-state species for the first time. We also observe oscillations with the most pronounced peak on the Fourier transform spectrum having a frequency of 530 cm(-1). The dyad mimics the dynamics of the natural light-harvesting complex LH2 from Rhodopseudomonas acidophila and is hence a good model system to be used in studies aimed to further explain previous work in which the branching ratio between the competing pathways of energy loss and energy transfer could be manipulated by adaptive femtosecond pulse shaping.     

Pyrrolidinone-modified di- and tripeptides: highly diastereoselective preparation and investigation of their stability

Pyrrolidine-2,4-diones have been identified as a novel starting point for the synthesis of peptide analogues. This paper describes a method for the efficient and diastereoselective incorporation of this moiety into peptide chains to furnish di- and tripeptide analogs. The stability of these pyrrolidinone modified di- and tripeptides was found to be markedly improved when compared to that of a natural peptide. In addition, solid phase peptide synthesis employing a pyrrolidinone containing tripeptide is demonstrated.