The dapE-encoded N-succinyl-l,l-diaminopimelic acid desuccinylase from Haemophilus influenzae is a dinuclear metallohydrolase

The Zn K-edge extended X-ray absorption fine structure (EXAFS) spectra, of the dapE-encoded N-succinyl-l,l-diaminopimelic acid desuccinylase (DapE) from Haemophilus influenzae have been recorded in the presence of one or two equivalents of Zn(II) (i.e. [Zn_(DapE)] and [ZnZn(DapE)]). The Fourier transforms of the Zn EXAFS are dominated by a peak at ca. 2.0 A, which can be fit for both [Zn_(DapE)] and [ZnZn(DapE)], assuming ca. 5 (N,O) scatterers at 1.96 and 1.98 A, respectively. A second-shell feature at ca. 3.34 A appears in the [ZnZn(DapE)] EXAFS spectrum but is significantly diminished in [Zn_(DapE)]. These data show that DapE contains a dinuclear Zn(II) active site. Since no X-ray crystallographic data are available for any DapE enzyme, these data provide the first glimpse at the active site of DapE enzymes. In addition, the EXAFS data for DapE incubated with two competitive inhibitors, 2-carboxyethylphosphonic acid and 5-mercaptopentanoic acid, are also presented.     

Manipulating the "straightness" and "curvature" of patterns of interaural cross correlation affects listeners' sensitivity to changes in interaural delay

The purpose of this study was to test the hypothesis that stimuli characterized by "straight" trajectories of their patterns of cross correlation foster greater sensitivity to changes in interaural temporal disparities (ITDs) than do stimuli characterized by more "curved" trajectories of their patterns of cross correlation. To do so, sensitivity to changes in ITD was measured, as a function of duration, using a set of "reference" stimuli that yielded differing relative amounts of straightness within their patterns of cross correlation while keeping the dominant trajectory at or near midline. The relative amounts of straightness were manipulated by employing specific combinations of bandwidth, ITD, and interaural phase disparity (IPD) of Gaussian noises centered at 500 Hz. The results were consistent with expectations in that the patterning of the threshold ITDs revealed increasingly poorer sensitivity as greater and greater curvature was imposed on the dominant, "midline," trajectory. The variations in threshold ITD across the stimulus conditions can be accounted for quite well quantitatively by assuming either that the listeners based their judgments on changes in the position of the most central peak of the cross-correlation function or that they based their judgments on changes in the centroid of a second-level cross-correlation function. In a second experiment, binaural detection was measured using a subset of the reference stimuli as maskers. As expected, sensitivity was poorest with the maskers characterized by the greatest curvature, which were also those having the lowest interaural correlation.     

Measurements of F2 and xF(nu)(3) - xF(nu;)(3) from CCFR nu(mu)-Fe and nu;(mu)-Fe Data in a Physics Model-Independent Way

We report on the extraction of the structure functions F2 and DeltaxF(3) = xF(nu)(3)-xF(nu;)(3) from CCFR nu(mu)-Fe and nu;(mu)-Fe differential cross sections. The extraction is performed in a physics model-independent (PMI) way. This first measurement of DeltaxF(3), which is useful in testing models of heavy charm production, is higher than current theoretical predictions. The ratio of the F2 (PMI) values measured in nu(mu) and mu scattering is in agreement (within 5%) with the predictions of next-to-leading-order parton distribution functions using massive charm production schemes, thus resolving the long-standing discrepancy between the two sets of data.     

An interleaved sampling strategy for MR spectroscopy in vivo: applications on human calf musculature

Assessment of relaxation times, magnetization transfer rates, or apparent diffusion coefficients by volume selective (1)H MR spectroscopy requires data from several single spectra with variable sequence parameters. Unintentional movements during the examination lead to inaccuracies, especially if the spatial distribution of concentrations is inhomogeneous. Improved comparability of the single spectra in a series recorded in vivo were obtained using a modified spectroscopic technique with INTerleaved ACquisiTion of multiple SPECtra (INTACTSPEC). INTACTSPEC series of spectra from the tibialis anterior muscle (m. tib. ant.), soleus muscle (m. soleus), and tibial bone marrow of 20 healthy volunteers were analyzed. Transverse relaxation times T(2) of methylene signals in muscular lipid stores ranged from 77 ms (intramyocellular methylene component in m. tib. ant.) to 88 ms (intramyocellular methylene component in m. soleus) and were similar to those from yellow tibial bone marrow (T(2) = 84 ms). Echo time-dependent signal intensities of choline and creatine deviated markedly from a monoexponential behavior in m. tib. ant., but were nearly exponential in m. soleus. Results from water diffusion measurements parallel and perpendicular to the axis of the lower leg showed significant differences between m. tib. ant. and m. soleus, probably due to the spatial orientation of the muscle fibers. Apparent diffusion coefficients along the leg axis were found to be higher in m. tib. ant. (2.10 +/- 0.08 x 10(-3) mm(2)/s) compared to m. soleus (1.78 +/- 0.11 x 10(-3) mm(2)/s), but m. soleus showed less restricted diffusion in perpendicular orientation (1.59 +/- 0.19 x 10(-3) mm(2)/s versus 1.20 +/- 0.08 x 10(-3) mm(2)/s in m. tib. ant.). Magnetization transfer experiments with various RF preparation pulse amplitudes led to very similar results for m. tib. ant. and m. soleus.     

Inhibition of hydrogen chemisorption on uranium surfaces by traces of water vapor

Traces of about 2% water vapor are sufficient to inhibit hydrogen dissociation and chemisorption on uranium surfaces, under low pressure exposures, at room temperature. The efficiency of the inhibition increases with temperature in the range of 200 - 400 K. The inhibition effect is also influenced by the extent of residual strain of the sample, with increasing inhibition efficiencies exhibited by a less strained surface. O₂, in contrast to H₂O, is not an inhibitor to surface adsorption and dissociation of hydrogen. Three types of mechanisms are discussed in order to account for the above inhibition effect of water. It is concluded that the most probable mechanism involves the reversible adsorption of water molecules on hydrogen dissociation sites causing their “blocking”.     

Obtaining the bidirectional transmittance distribution function of isotropically scattering materials using an integrating sphere

This paper demonstrates a method to determine the bidirectional transmittance distribution function (BTDF) using an integrating sphere. Information about the sample’s angle-dependent scattering is obtained by making transmittance measurements with the sample at different distances from the integrating sphere. Knowledge about the illuminated area of the sample and the geometry of the sphere port in combination with the measured data combines to a system of equations that includes the angle-dependent transmittance.The resulting system of equations is an ill-posed problem which rarely gives a physical solution. A solvable system is obtained by using Tikhonov regularization on the ill-posed problem. The solution to this system can then be used to obtain the BTDF.Four bulk-scattering samples were characterised using two goniophotometers and the described method to verify the validity of the new method. The agreement shown is excellent for the more diffuse samples. The solution to the low-scattering samples contains unphysical oscillations, but still gives the correct shape of the solution. The origin of the oscillations and why they are more prominent in low-scattering samples are discussed.     

A holographic model of deconfinement and chiral symmetry restoration

We analyze the finite temperature behavior of the Sakai-Sugimoto model, which is a holographic dual of a theory which spontaneously breaks a U(N_f)_L × U(N_f)_R chiral flavor symmetry at zero temperature. The theory involved is a 4 + 1 dimensional supersymmetric SU(N_c) gauge theory compactified on a circle of radius R with anti-periodic boundary conditions for fermions, coupled to N_f left-handed quarks and N_f right-handed quarks which are localized at different points on the compact circle (separated by a distance L). In the supergravity limit which we analyze (corresponding in particular to the large N_c limit of the gauge theory), the theory undergoes a deconfinement phase transition at a temperature T_d = 1/2πR. For quark separations obeying L > L_c ? 0.97 ∗ R the chiral symmetry is restored at this temperature, but for L < L_c ? 0.97 ∗ R there is an intermediate phase which is deconfined with broken chiral symmetry, and the chiral symmetry is restored at T_χSB ? 0.154/L. All of these phase transitions are of first order.     

Evidence for a wide extra-astrocytic distribution of S100B in human brain

Background  

S100B is considered an astrocytic in-situ marker and protein levels in cerebrospinal fluid (CSF) or serum are often used as biomarker for astrocytic damage or dysfunction. However, studies on S100B in the human brain are rare. Thus, the distribution of S100B was studied by immunohistochemistry in adult human brains to evaluate its cell-type specificity.     

Ways of formulating wind speed in heat convection significantly influencing pavement temperature prediction

This paper investigates the influences of wind speed and of heat-convection coefficient on the temperature prediction of a slab. Numerical calculation of a slab temperature found that wind speed varies the slab temperature in a degree of 2–10 °C. More varying degrees occur at midday and in sunny day but less, at midnight and in a cloud day. These degrees also depend on the used heat-convection coefficients, which have different values in different models. Special emphases are paid to unearth the correlation between different heat convection coefficients and find the best alternative in the slab-temperature prediction.