Photochemistry of 2-naphthoyl azide. An ultrafast time-resolved UV-vis and IR spectroscopic and computational study

The photochemistry of 2-naphthoyl azide was studied in various solvents by femtosecond time-resolved transient absorption spectroscopy with IR and UV-vis detection. The experimental findings were interpreted with the aid of computational studies. Using polar and nonpolar solvents, the formation and decay of the first singlet excited state (S(1)) was observed by both time-resolved techniques. Three processes are involved in the decay of the S(1) excited state of 2-naphthoyl azide: intersystem crossing, singlet nitrene formation, and isocyanate formation. The lifetime of the S(1) state decreases significantly as the solvent polarity increases. In all solvents studied, isocyanate formation correlates with the decay of the azide S(1) state. Nitrene formation correlates with the decay of the relaxed S(1) state only upon 350 nm excitation (S(0) → S(1) excitation). When S(n) (n ≥ 2) states are populated upon excitation (λ(ex) = 270 nm), most nitrene formation takes place within a few picoseconds through the hot S(1) and higher singlet excited states (S(n)) of 2-naphthoyl azide. The data correlate with the results of electron density difference calculations that predict nitrene formation from the higher-energy singlet excited states, in addition to the S(1) state. For all of these experiments, no recovery of the ground state was observed up to 3 ns after photolysis, which indicates that both internal conversion and fluorescence have very low efficiencies.     

Accurate quantum wave packet calculations for the F + HCl → Cl + HF reaction on the ground 1(2)A' potential energy surface

We present converged exact quantum wave packet calculations of reaction probabilities, integral cross sections, and thermal rate coefficients for the title reaction. Calculations have been carried out on the ground 1(2)A' global adiabatic potential energy surface of Deskevich et al. [J. Chem. Phys. 124, 224303 (2006)]. Converged wave packet reaction probabilities at selected values of the total angular momentum up to a partial wave of J = 140 with the HCl reagent initially selected in the v = 0, j = 0-16 rovibrational states have been obtained for the collision energy range from threshold up to 0.8 eV. The present calculations confirm an important enhancement of reactivity with rotational excitation of the HCl molecule. First, accurate integral cross sections and rate constants have been calculated and compared with the available experimental data.     

Ab initio ground‐state potential energy function and vibration‐rotation energy levels of imidogen,NH

The accurate ground‐state potential energy function of imidogen, NH, has been determined from ab initio calculations using the multireference averaged coupled‐pair functional (MR‐ACPF) method in conjunction with the correlation‐consistent core‐valence basis sets up to octuple‐zeta quality. The importance of several effects, including electron correlation beyond the MR‐ACPF level of approximation, the scalar relativistic, adiabatic, and nonadiabatic corrections were discussed. Along with the large one‐particle basis set, all of these effects were found to be crucial to attain “spectroscopic” accuracy of the theoretical predictions of vibration‐rotation energy levels of NH. © 2015 Wiley Periodicals, Inc.     

Intermediate Electrostatic Field for the Generalized Elongation Method

An intermediate electrostatic field is introduced to improve the accuracy of fragment‐based quantum‐chemical computational methods by including long‐range polarizations of biomolecules. The point charge distribution of the intermediate field is generated by a charge sensitivity analysis that is parameterized for five different population analyses, namely, atoms‐in‐molecules, Hirshfeld, Mulliken, natural orbital, and Voronoi population analysis. Two model systems are chosen to demonstrate the performance of the generalized elongation method (ELG) combined with the intermediate electrostatic field. The calculations are performed for the STO‐3G, 6‐31G, and 6‐31G(d) basis sets and compared with reference Hartree–Fock calculations. It is shown that the error in the total energy is reduced by one order of magnitude, independently of the population analyses used. This demonstrates the importance of long‐range polarization in electronic‐structure calculations by fragmentation techniques.     

Self-assembly of phospholipid molecules at a Au(111) electrode surface

We described the first scanning tunneling microscopy study of spreading unilamellar vesicles of 1,2-dimyristoyl-sn-glycero-3-phosphatidylcholine (DMPC) at a Au(111) electrode surface. At the initial stage of the film formation, the molecular resolution images revealed that DMPC molecules are adsorbed flat with the acyl chains oriented parallel to the surface. The molecules assemble into double rows by aligning the acyl chains in the nearest neighbor direction of the reconstructed Au(111) surface and assuming a 90 +/- 10 degrees angle with respect to line of the molecular row. After approximately 30 min, this film is transformed into a hemimicellar state with long rows characteristic for the formation of hemicylindrical surface micelles. At hydrophilic surfaces such as glass, spreading of vesicles involves adsorption, rupture, and sliding of a single bilayer on a lubricating film of the solvent. We have provided the first evidence that a different mechanism is involved in spreading the vesicles at gold. The molecules released by rupture of vesicles self-assemble into an ordered film, and the assembly is controlled by the chain-substrate interaction.     

Steric asymmetry and lambda-doublet propensities in state-to-state rotationally inelastic scattering of NO(2Pi(1/2)) with He

Relative integrated cross sections are measured for rotationally inelastic scattering of NO(2Pi(1/2)),hexapole selected in the upper lambda-doublet level of the ground rotational state (j = 0.5), in collisions with He at a nominal energy of 514 cm(-1). Application of a static electric field E in the scattering region, directed parallel or antiparallel to the relative velocity vector v, allows the state-selected NO molecule to be oriented with either the N end or the O end towards the incoming He atom. Laser-induced fluorescence detection of the final state of the NO molecule is used to determine the experimental steric asymmetry, [formula: see text], which is equal to within a factor of (- 1) to the molecular steric effect, S(i-->f) is identical with (sigma(He-->NO) - (sigma(He-->ON))/(sigma(He-->NO) + sigma(He-->ON)). The dependence of the integral inelastic cross section on the incoming lambda-doublet component is also observed as a function of the final rotational (j'), spin-orbit (omega'), and lambda-doublet (epsilon') state. The measured steric asymmetries are significantly larger than previously observed for NO-Ar scattering, supporting earlier proposals that the repulsive part of the interaction potential is responsible for the steric asymmetry. In contrast to the case of scattering with Ar, the steric asymmetry of NO-He collisions is not very sensitive to the value of omega'. However, the lambda-doublet propensities are very different for [omega=0.5(F1)-->omega'= 1.5(F2)] and [omega=0.5(F1)-->omega'=0.5(F1)] transitions. Spin-orbit manifold conserving collisions exhibit a propensity for parity conservation at low deltaj, but spin-orbit manifold changing collisions do not show this propensity. In conjunction with the experiments, state-to-state cross sections for scattering of oriented NO(2Pi) molecules with He atoms are predicted from close-coupling calculations on restricted coupled-cluster methods including single, double, and noniterated triple excitations [J. Klos, G. Chalasinski, M. T. Berry, R.Bukowski, and S. M. Cybulski, J. Chem. Phys. 112, 2195 (2000)] and correlated electron-pair approximation [M. Yang and M. H. Alexander, J. Chem. Phys. 103, 6973 (1995)] potential energy surfaces. The calculated steric asymmetry S(i-->f) of the inelastic cross sections at Etr= 514 cm(-1) is in reasonable agreement with that derived from the present experimental measurements for both spin-manifold conserving (F1-->Fl) and spin-manifold changing (F1 --F2) collisions, except that the overall sign of the effect is opposite. Additionally, calculated field-free integral cross sections for collisions at Etr = 508 cm(-1) are compared to the experimental data of Joswig et al. [J. Chem. Phys.85, 1904 (1986)]. Finally, the calculated differential cross section for collision energy Etr= 491 cm(-1) is compared to experimental data of Westley et al. [J. Chem. Phys. 114, 2669 (2001)] for the spin-orbit conserving transition F1 (j = 0.5) -F1f (j' = 3.5).     

Spectroscopic studies into the influence of UV radiation on elastin hydrolysates in water solution

An investigation into the influence of UV irradiation on elastin hydrolysates dissolved in water was carried out using UV-Vis spectroscopy and spectrofluorometry. It was found that the absorption of elastin hydrolysates in solution increased during irradiation of the sample. For fluorescence of elastin hydrolysates we observed both, a decrease and increase of this value during irradiation of the sample. After UV irradiation of the elastin solution we observed a minor increase of overall absorption, most notably between 250 nm and 280 nm. Moreover, after UV irradiation a wide peak emerged between 290 nm and 310 nm with maximum at about 305 nm. The new peak suggests that new photoproducts are formed during UV irradiation of elastin hydrolysates. The fluorescence of elastin hydrolysates was observed at 305 nm and at 380 nm after excitation at 270 nm. UV irradiation caused fluorescence fading at 305 nm and 380 nm. After 30 min of irradiation a new broad weak band of fluorescence, attributable to new photoproducts, emerged in the UV wavelength region with emission maximum between 400 nm and 500 nm.     

Layer-by-layer PMIRRAS characterization of DMPC bilayers deposited on a Au111 electrode surface

A combination of Langmuir-Blodgett and Langmuir-Schaefer techniques was employed to deposit 1,2-dimyristoyl-sn-glycero-3-phosphocholine (DMPC) bilayers at a gold electrode surface. One leaflet consisted of hydrogen-substituted acyl chains, and the second leaflet was composed of molecules with deuterium-substituted acyl chains. This architecture allowed for layer-by-layer analysis of the structure of the bilayer. Photon polarization modulation infrared reflection absorption spectroscopy (PM-IRRAS) was used to determine the conformation and orientation of the acyl chains of DMPC molecules in the individual leaflets as a function of the potential applied to the gold electrode. The bilayer is adsorbed onto the metal surface when the field applied to the membrane does not exceed approximately 108 V/m. When adsorbed, the bottom leaflet is in contact with a hydrophobic metal surface, and the top leaflet is interacting with the aqueous solution. The asymmetry of the environment has an effect on the orientation of the DMPC molecules in each leaflet. The tilt angle of the acyl chains of the DMPC molecules in the bottom leaflet that is in contact with the gold is approximately 10 degrees smaller than that observed for the top leaflet that is exposed to the solution. These studies provide direct evidence that the structure of a phospholipid bilayer deposited at an electrode surface is affected by interaction with the metal.     

Preconcentration and decomposition of perfluorinated carboxylic acids on an activated charcoal cartridge with sodium biphenyl reagent and its determination at microg L(-1) level on the basis of flow injection-fluorimetric detection of fluoride ion

Perfluorinated surfactants of heptafluorobutylate and pentadecafluorooctanoate ions were adsorbed on an activated charcoal cartridge and decomposed with sodium biphenyl (SBP) reagent to form inorganic fluoride ion. The fluoride ion thus formed was determined by flow injection analysis (FIA) using quercetin-Zr complex as a fluorimetric reagent, where λ_ex and λ_em were 422 and 491 nm, respectively. The limit of detection for fluoride ion by the FIA system was developed to 1.1 × 10⁻⁶ M (signal to noise ratio of three), when 50% (v/v) tetrahydrofuran (THF) was used as a dissolving solvent for quercetin. The perfluorinated surfactants in the sample solution were quantitatively adsorbed on the cartridge containing 100 mg of activated charcoal and were decomposed with 0.5 mL of sodium biphenyl reagent after drying thoroughly by flowing through dry nitrogen gas. The fluoride ion formed was recovered with 3 mL of purified water as an eluent, and it was determined by the fluorimetric flow injection system. The blank fluorescence signal accompanied during the adsorption/decomposition on the cartridge was reduced by washing the activated charcoal with acetone. The blank signal was also observed from dimethoxyethane, which was used in sodium biphenyl reagent. When 600 mL sample solution was used and 200 times enrichment was applied, the heptafluorobutylate and pentadecafluorooctanoate ions at the concentrations of 2.1 μg L⁻¹ were quantitatively recovered as fluoride ion, and the limit of detections for the perfluorinated surfactants were 0.3 and 0.3 μg L⁻¹ for the two perfluorinated surfactants, respectively (3 sigma of the blank signal).     

Ab initio prediction of the potential energy surface and vibration-rotation energy levels of BeH2

The equilibrium structure and potential energy surface of beryllium dihydride BeH(2) in its ground electronic state have been determined from highly accurate ab initio calculations. The vibration-rotation energy levels of three isotopomers BeH(2), BeD(2), and BeHD were predicted using the variational method. The calculated spectroscopic constants are in remarkably good agreement with the existing experimental data (sub-cm(-1) accuracy) and should be useful in a further analysis of high-resolution vibration-rotation spectra of all three isotopomers.