A review on <Superscript>90</Superscript>Y-labeled compounds and biomolecules

The field of therapeutic nuclear medicine is emerging rapidly as choice of treatment in oncology and other cellular malignancies. The growth of this branch of nuclear medicine is greatly facilitated by the introduction of a number of new radiopharmaceuticals and radionuclides. ⁹⁰Y-radiopharmaceuticals have confirmed their worth in medical and clinical areas in a very short span of time. The ⁹⁰Y is a radioisotope widely used for therapeutic purposes and considerable perfection has been made to understand the chemistry of ⁹⁰Y-labeled radiopharmaceuticals. The development of these radiopharmaceuticals can be made favorable by using appropriate buffer, incubation period, optimal pH, specific activity and reaction temperature. In this review, we have discussed the preparation of range of ⁹⁰Y transporting biological molecules such as antibodies radiolabeled peptides, antigens and microsphere with their clinical applications.     

Super face d-antimagic labeling for disjoint union of toroidal fullerenes

The discovery of the fullerene molecules and related forms of carbon such as nanotubes has generated an explosion of activity in chemistry, physics, and materials science. Classical fullerene is an all-carbon molecule in which the atoms are arranged on a pseudospherical framework made up entirely of pentagons and hexagons. A toroidal fullerene (toroidal polyhex) is a cubic bipartite graph embedded on the torus such that each face is a hexagon. In this paper we examine the existence of entire labeling, where face-weights of all 6-sided faces of disjoint union of toroidal fullerenes form an arithmetic progression with common difference \(\hbox {d}\in \{1,2,3\}\).     

Characterization of dipeptidylcarboxypeptidase of <Emphasis Type="Italic">Leishmania donovani</Emphasis>: a molecular model for structure based design of antileishmanials

Leishmania donovani dipeptidylcarboxypeptidsae (LdDCP), an angiotensin converting enzyme (ACE) related metallopeptidase has been identified and characterized as a putative drug target for antileishmanial chemotherapy. The kinetic parameters for LdDCP with substrate, Hip-His-Leu were determined as, Km, 4 mM and Vmax, 1.173 μmole/ml/min. Inhibition studies revealed that known ACE inhibitors (captopril and bradykinin potentiating peptide; BPP1) were weak inhibitors for LdDCP as compared to human testicular ACE (htACE) with Ki values of 35.8 nM and 3.9 μM, respectively. Three dimensional model of LdDCP was generated based on crystal structure of Escherichia coli DCP (EcDCP) by means of comparative modeling and assessed using PROSAII, PROCHECK and WHATIF. Captopril docking with htACE, LdDCP and EcDCP and analysis of molecular electrostatic potentials (MEP) suggested that the active site domain of three enzymes has several minor but potentially important structural differences. These differences could be exploited for designing selective inhibitor of LdDCP thereby antileishmanial compounds either by denovo drug design or virtual screening of small molecule databases.     

Two New Disulfated Triterpenoids from Zygophyllum fabago

From the aerial parts of Zygophyllum fabago, two new monosodium salts of sulfated derivatives of ursolic acid, along with two known quinovic acid glycosides were isolated. The structures of the new compounds were determined as (3β,4α)‐3,23,30‐trihydroxyurs‐20‐en‐28‐al 3,23‐di(sulfate) sodium salt (1 : 1) ( 1 ) and of (3β,4α)‐3,23,28‐trihydroxyurs‐20‐en‐30‐yl β‐D ‐glucopyranoside 3,23‐di(sulfate) sodium salt (1 : 1) ( 2 ) with the molecular formula C₃₀H₄₇NaO₁₀S₂ and C₃₆H₅₉NaO₁₅S₂, respectively. The structures of the known compounds were 3‐O‐(2‐O‐sulfo‐β‐D ‐quinovopyranosyl)quinovic acid 28‐β‐D ‐glucopyranosyl ester ( 3 ) and 3‐O‐(β‐D ‐glucopyranosyl)quinovic acid 28‐β‐D ‐glucopyranosyl ester ( 4 ) (quinovic acid=(3β)‐3‐hydroxyurs‐12‐ene‐27,28‐dioic acid). The structures of all these compounds were determined by using 1D‐ and 2D‐NMR spectroscopic techniques.     

Synthesis of 5‐(Arylselanyl)‐2‐(arylsulfanyl)benzoates by [3+3] Cyclocondensation of 3‐(Arylsulfanyl)‐1‐(silyloxy)buta‐1,3‐dienes with 2‐(Arylselanyl)‐3‐(silyloxy)alk‐2‐en‐1‐ones

Functionalized 5‐(arylselanyl)‐2‐(arylsulfanyl)benzoates were prepared by [3+3] cyclocondensation of 3‐(arylsulfanyl)‐1‐(silyloxy)buta‐1,3‐dienes with 2‐(arylselanyl)‐3‐(silyloxy)‐alk‐2‐en‐1‐ones.     

PAPER—Accelerating parallel evaluations of ROCS

Modern graphics processing units (GPUs) are flexibly programmable and have peak computational throughput significantly faster than conventional CPUs. Herein, we describe the design and implementation of PAPER, an open‐source implementation of Gaussian molecular shape overlay for NVIDIA GPUs. We demonstrate one to two order‐of‐magnitude speedups on high‐end commodity GPU hardware relative to a reference CPU implementation of the shape overlay algorithm and speedups of over one order of magnitude relative to the commercial OpenEye ROCS package. In addition, we describe errors incurred by approximations used in common implementations of the algorithm. © 2009 Wiley Periodicals, Inc. J Comput Chem 2010     

The effect of gamma irradiation on glass transition temperature and thermal stability of Se96Sn4 chalcogenide glass

Se₉₆Sn₄ chalcogenide glass was prepared by melt quenching technique and exposed, at room temperature, to different doses of 4, 8, 12, 24 and 33 kGy of high-energy ⁶⁰Co gamma irradiation. Differential scanning calorimeter (DSC) was used under non-isothermal condition to determine the glass transition temperature T_g, onset T_c and peak T_p temperatures of crystallization, of un-irradiated and γ-irradiated samples, at four different heating rates. The variation of T_g with heating rates was utilized to calculate the glass transition activation energy E_t for un-irradiated and γ-irradiated glass, using the methods suggested by Kissinger and Moynihan. Based on the obtained values of the characteristic temperatures T_g, T_c and T_p, thermal stability was monitored through the calculation of the S parameter and the crystallization rate factor 〈K_p〉 for irradiated and un-irradiated glass. Results reveal that, as γ-dose increases T_g increases up to 12 kGy then decreases at higher doses but remains more than that of un-irradiated glass. Meanwhile, both E_t and 〈K_p〉 attain their minimum values at the same dose of 12 kGy and the glass is thermally stable at this particular dose.     

Outdoor ground impedance models

Many models for the acoustical properties of rigid-porous media require knowledge of parameter values that are not available for outdoor ground surfaces. The relationship used between tortuosity and porosity for stacked spheres results in five characteristic impedance models that require not more than two adjustable parameters. These models and hard-backed-layer versions are considered further through numerical fitting of 42 short range level difference spectra measured over various ground surfaces. For all but eight sites, slit-pore, phenomenological and variable porosity models yield lower fitting errors than those given by the widely used one-parameter semi-empirical model. Data for 12 of 26 grassland sites and for three beech wood sites are fitted better by hard-backed-layer models. Parameter values obtained by fitting slit-pore and phenomenological models to data for relatively low flow resistivity grounds, such as forest floors, porous asphalt, and gravel, are consistent with values that have been obtained non-acoustically. Three impedance models yield reasonable fits to a narrow band excess attenuation spectrum measured at short range over railway ballast but, if extended reaction is taken into account, the hard-backed-layer version of the slit-pore model gives the most reasonable parameter values.     

Dynamical effects of QCD in q2$ \bar{{q}}^{{2}}_{}$ systems

We study the coupling of a tetraquark system to an exchanged meson-meson channel, using a pure gluonic theory based four-quark potential matrix model which is known to fit well a large number of data points for lattice simulations of different geometries of a four-quark system. We find that if this minimal-area-based potential matrix replaces the earlier used simple Gaussian form for the gluon field overlap factor f in its off-diagonal terms, the resulting T -matrix and phase shifts develop an angle dependence whose partial-wave analysis reveals D wave and higher angular-momentum components in it. In addition to the obvious implications of this result for the meson-meson scattering, this new feature indicates the possibility of orbital excitations influencing properties of meson-meson molecules through a polarization potential. We have used a formalism of the resonating group method, treated kinetic energy and overlap matrices on model of the potential matrix, but decoupled the resulting complicated integral equations through the Born approximation. In this exploratory study we have used a quadratic confinement and not included the spin dependence; we also used the approximation of equal constituent quark masses.     

Crystallization kinetics, glass transition kinetics, and thermal stability of Se70−xGa30Inx (x=5, 10, 15, and 20) semiconducting glasses

Crystallization and glass transition kinetics of Se_70−xGa₃₀In_x (x=5, 10, 15, and 20) semiconducting chalcogenide glasses were studied under non-isothermal condition using a Differential Scanning Calorimeter (DSC). DSC thermograms of the samples were recorded at four different heating rates 5, 10, 15, and 20 K/min. The variation of the glass transition temperature (T_g) with the heating rate (β) was used to calculate the glass transition activation energy (E_t) using two different models. Meanwhile, the variation of the peak temperature of crystallization (T_p) with β was utilized to deduce the crystallization activation energy (E_c) using Kissinger, Augis-Bennet, and Takhor models. Results reveal that E_t decreases with increasing In content, while both T_g and E_c exhibit the opposite behavior, and the crystal growth occurs in one dimension. The variation of these thermal parameters with the average coordination number <Z> was also discussed, and the results were interpreted in terms of the type of bonding that In makes with Se. Assessment of thermal stability and glass forming ability (GFA) was carried out on the basis of some quantitative criteria and the results indicate that thermal stability is enhanced while the crystallization rate is reduced with the addition of In to Se-Ga glass.