Alternate stranded triplex formation of chimeric DNA composed of tandem alpha- and beta-anomeric strands

A chimeric oligoDNA composed of a natural beta-anomeric oligonucleotide portion and an unnatural alpha-anomeric oligonucleotide portion forms an alternate stranded triplex possessing enhanced thermal stability compared to the triplexes composed of the parental oligomers.     

Circular dichroism in ferroelectric and antiferroelectric liquid crystals

Liquid crystal induced circular dichroism (LCICD) measurements were made to investigate the pretransitional phenomena in the S_A phase just above the S_A-S*_C and S_A-S*_CA phase transitions of both the first and the second order. The pretransitional LCICD in S_A was observed in the second order phase transition to S*_c and S*_cA, suggesting the existence of a dynamic helical structure in S_A. Such behaviour disappears when the transition is of the first order. It seems that the handedness of the dynamic helix in S_A is the same as that in S*_c even when the lower temperature phase is S*_cA. This is explained as a result of a dominant contribution of ferroelectric soft mode.     

Identification of a Single Phosphorylation Site Within Octopus Rhodopsin

Abstract— Light-dependent phosphorylation of rhodopsin (Rho) is a first step in the desensitization of the signaling state of the receptor during vertebrate and invertebrate visual transduction. We found that only ³⁵⁸Ser of the photoac-tivated octopus Rho (oRho*) was phosphorylated by octopus rhodopsin kinase (oRK). Tryptic truncation of the C-terminal PPQGY repeats of oRho that follow the phosphorylation region did not influence spectral or G-protein activation properties of oRho but abolished phos phorylation. Despite significant structural differences between oRK and mammalian RK, these results provide i further evidence of the importance of singly phosphorylated species of Rho* in the generation of arrestin binding sites.     

Supplementary Observations on the Chemistry of the Alkaloids of Berberine Series and Related Compounds. III. Fluorescence Spectra of the Alkaloids of Berberine Series and Their Related Compounds

The absorption maxima of the fluorescence spectra of the berberine series alkaloids are broadly distributed between 360 and 560 mμ. The fluorescence spectra of most substances of this series are very monotonous one having a single peak, the spectra of tetrahydrocoptisine and tetrahydroepiberberine are quite exceptional and consist of two wavy bands. The introduction of the auxochrome group into the molecule of “proto” compounds causes the decreasing of the fluorescence intensity and this effect is strongest in case of transition from protoberberine to berberine. That, tetrahydropalmatine does not show the distinct fluorescence spectrum band is the only incomprehensible fact.     

Semi-empirical LCAO-Xα theory for transition metal complexes. I. An outline of the theory

A semi-empirical theory for transition metal complexes is presented. Unusual aspects of the theory are (1) employment of Xα theory, (2) adoption of theoretical exchange parameter, (3) exclusion of (n + 1)s and (n + 1)p atomic orbitals of a nd-transition metal, and (4) variation of atomic orbitals in LCAO method. Also, an improved Mulliken approximation is proposed and used to simplify the LCAO-Xα equations.     

Preparation of sterically congested di(4-pyridyl)diazomethanes and characterization of triplet carbenes from them

Di(4-pyridyl)diazomethanes having two and four ortho chlorine groups were prepared, and the triplet carbenes generated from them were characterized by ESR and UV/vis at low temperature and time-resolved UV/vis at room temperature. An appreciable increase in the stability of triplet carbenes is achieved by introducing ortho chlorine groups. [structure: see text]     

Studies of NO adsorption on Pt(110)-(1 x 2) and (1 x 1) surfaces using density functional theory

Adsorption of NO on Pt(110)-(1 x 2) and (1 x 1) surfaces has been investigated by density functional theory (DFT) method (periodic DMol(3)) with full geometry optimization and without symmetry restriction. Adsorption energies, structures, and N-O stretching vibrational frequencies of NO are studied by considering multiple possible adsorption sites and comparing with the experimental data. Adsorption is strongly dependent on both coverage and surface phase. The assignment of adsorption sites has been carried out with precise calculation of vibrational frequencies for NO on various sites. We clearly show the NO site switching on both of the surfaces as found in the experiments: at low coverages, bridge species is formed on the surface, and at high coverages, NO switches to atop sites.     

Twist-grain-boundary structure in the B4 phase of a bent-core molecular system identified by second harmonic generation circular dichroism measurement

Second harmonic generation circular dichroism (SHG CD) measurements are performed on the B4 phase of a bent-core molecular system. Numerical analysis of SHG CD incorporating magnetic-dipole as well as electric-dipole interaction shows that the B4 phase is in a twist-grain-boundary structure with the helical axis along the bent direction of the molecules. The result is extremely important in the sense that achiral molecules are spontaneously optically resolved, i.e., deracemization, the chiral domains of which give rise to huge chiral nonlinear optical effect.     

Raman probe using a single hollow waveguide

A simple Raman probe was realized using a single flexible hollow waveguide (HW). A HW coated with a silver film, which had reasonable transmission and little optical background noise, was used as a bidirectional transmission fiber for both the excitation and collection of Raman scattered light. The HW itself generated no Raman scattering or fluorescence noise during transmission. A complex filtering system at the end of the waveguide was thus unnecessary. In addition, the measured Raman spectra showed better signal-to-noise ratios than a conventional Raman fiber probe. The HW's suitability as a Raman fiber probe was also demonstrated.