Natural products and Chagas' disease: a review of plant compounds studied for activity against Trypanosoma cruzi

Here, we review studies that have investigated the activity of plant-derived compounds against Trypanosoma cruzi, the etiologic agent of Chagas’ disease. In the last decade, more than 300 species belonging to almost 100 families have been evaluated for activity, and here we describe the compounds isolated; 85 references are cited.     

Multi-stage solvers optimized for damping and propagation

Explicit multi-stage solvers are routinely used to solve the semi-discretized equations that arise in Computational Fluid Dynamics (CFD) problems. Often they are used in combination with multi-grid methods. In that case, the role of the multi-stage solver is to efficiently reduce the high frequency modes on the current grid and is called a smoother. In the past, when optimizing the coefficients of the scheme, only the damping characteristics of the smoother were taken into account and the interaction with the remainder of the multi-grid cycle was neglected. Recently it had been found that coefficients that result in less damping, but allow for a higher Courant-Friedrichs-Lewy (CFL) number are often superior to schemes that try to optimize damping alone. While this is certainly true for multi-stage schemes used as a stand-alone solver, we investigate in this paper if using higher CFL numbers also yields better results in a multi-grid setting. We compare the results with a previous study we conducted and where a more accurate model of the multi-grid cycle was used to optimize the various parameters of the solver.We show that the use of the more accurate model results in better coefficients and that in a multi-grid setting propagation is of little importance.We also look into the gains to be made when we allow the parameters to be different for the pre- and post-smoother and show that even better coefficients can be found in this way.     

Existence of a Weak Solution in L p to the Vortex-Wave System

The vortex-wave system is a coupling of the two-dimensional vorticity equation with the point-vortex system. It is a model for the motion of a finite number of concentrated vortices moving in a distributed vorticity background. In this article, we prove existence of a weak solution to this system with an initial background vorticity in L ^p , p>2, up to the time of first collision of point vortices.     

Balancing binding strength and charge transfer lifetime in supramolecular associates of fullerenes

A macrocyclic exTTF host for fullerenes offers control over the electronic coupling between an electron donor and an acceptor, and stabilizes the charge separated state lifetimes into the range of 500 ps.     

A simple and green analytical method for determination of glyphosate in commercial formulations and water by diffuse reflectance spectroscopy

This article describes a simple, inexpensive, and environmentally friendly method for the monitoring of glyphosate using diffuse reflectance spectroscopy. The proposed method is based on reflectance measurements of the colored compound produced from the spot test reaction between glyphosate and p-dimethylaminocinnamaldehyde (p-DAC) in acid medium, using a filter paper as solid support. Experimental designs were used to optimize the analytical conditions. All reflectance measurements were carried out at 495 nm. Under optimal conditions, the glyphosate calibration graphs obtained by plotting the optical density of the reflectance signal (AR) against the concentration were linear in the range 50-500 μg mL(-1), with a correlation coefficient of 0.9987. The limit of detection (LOD) for glyphosate was 7.28 μg mL(-1). The technique was successfully applied to the direct determination of glyphosate in commercial formulations, as well as in water samples (river water, pure water and mineral drinking water) after a previous clean-up or pre-concentration step. Recoveries were in the ranges 93.2-102.6% and 91.3-102.9% for the commercial formulations and water samples, respectively.     

The effect of composition of solid silver amalgam electrodes on their electrochemical response

The main purpose of this work was to evaluate the effect of the silver to mercury ratio on the voltammetric responses of silver solid amalgam electrodes (AgSAE’s). For this, the AgSAE were prepared by mechanical mixing the metals in the following mass ratios of silver to mercury: 30/70, 40/60, 50/50, 60/40, and 70/30. The resulting AgSAE’s were physically characterized by energy dispersive X-ray analysis, X-ray diffraction and scanning electron microscopy, confirming the mass percentages of the silver and mercury, the total absence of liquid mercury and a globular structure of all AgSAE’s. Furthermore, it was observed that the AgSAE 30/70 contained only one single phase (Ag₂Hg₃), and no metallic silver or mercury oxides. Additionally, the resulting AgSAE’s were chemically characterized with respect to the influence of the electrode composition on the reproducibility and electrochemical signals of a hexamine-ruthenium (III) chloride solution by use of electrochemical impedance spectroscopy and cyclic voltammetry. The separation between anodic and cathodic peaks, and consequently, the charge transfer resistance across the electrode/solution interface, and the electroactive area were calculated demonstrating that the 30/70 composition is the best surface for practical applications. Finally, square-wave voltammetry experiments were performed in 4-nitrophenol solution, with a previous optimization of the experimental and voltammetric parameters. The calculated detection limit shows that the AgSAE 30/70 is suitable for determining any contamination by p-nitrophenol, minimizing the toxic residues in case of using liquid mercury electrodes.     

Characterization of γ-carboxylated tryptic peptides by collision-induced dissociation and electron transfer dissociation mass spectrometry

Vitamin K-dependent carboxylation of glutamic acid (Glu) residues into γ-carboxyglutamic acid (Gla) is a post-translational modification essential for normal protein activity of, for example, proteins involved in the blood coagulation system. These proteins may contain as many as 12 sites for γ-carboxylation within a protein sequence of 45 amino acid residues. In the biopharmaceutical industry, powerful analytical techniques are required for identification and localization of modified sites. We here present comparatively easy and rapid methods for studies of Gla-containing proteins using recent technology. The performances of two mass spectrometric fragmentation techniques, collision-induced dissociation (CID) and electron transfer dissociation (ETD), were evaluated with respect to γ-carboxylated peptides, applying on-line LC-ion trap MS. ETD MS has so far not been reported for Gla-containing peptides and the applicability of CID for heavily γ-carboxylated proteins has not been evaluated. The anticoagulant protein, protein C, containing nine Gla-sites, was chosen as a model protein. After tryptic digestion, three peptides containing Gla-residues were detected by MS; a 1.2 kDa fragment containing two Gla-residues, a 4.5 kDa peptide containing seven residues and also the 5.6 kDa tryptic peptides containing all nine Gla-residues. Regarding the shortest peptide, both CID and ETD provided extensive peptide sequencing. For the larger peptides, fragmentation by CID resulted in loss of the 44 Da CO(2)-group, while little additional fragmentation of the peptide chain was observed. In contrast, ETD resulted in comprehensive fragmentation of the peptide backbone. The study demonstrates that the combination of both techniques would be beneficial and complementary for investigation of γ-carboxylated proteins and peptides.     

Antimicrobial activities of indole alkaloids from Tabernaemontana catharinensis

Tabernaemontana catharinensis root bark ethanol extract, EB2 fraction and the MMV alkaloid (12-methoxy-4-methylvoachalotine) were evaluated for their antimicrobial activities. T. catharinensis ethanol extract was effective against both strains of the dermatophyte Trichophyton rubrum at concentrations of 2.5 mg/mL (wild strain) and 1.25 mg/mL (mutant strain), while the EB2 fraction and MMV alkaloid showed a strong antifungal activity against wild and mutant strains with MIC values of <0.02 and 0.16 mg/mL, respectively. The EB2 fraction showed a strong antibacterial activity against ATCC strains of S. aureus, S. epidermidis, E. coli and P. aeruginosa with MICs from <0.02 to 0.04 mg/mL, as well as against resistant clinical isolates species of Enterococcus sp, Klebsiella oxytoca, Citrobacter, K. pneumoniae, P. mirabilis, S. aureus, S. epidermidis, E. coli and P. aeruginosa with MIC values ranging from 0.04 to 0.08 mg/mL. The MMV alkaloid presented a MIC of 0.16 mg/mL against the strains of S. aureus and E. coli ATCC. For the resistant clinical isolates Enterococcus sp, Citrobacter, S. aureus, S. epidermidis, E. coli and P. aeruginosa the MIC of MMV ranged from 0.08 to 0.31 mg/mL. The chromatography analysis of the EB2 fraction revealed the presence of indole alkaloids, including MMV, possibly responsible for the observed antimicrobial activity.     

Complexation of [2.2]paracyclophane with β- and γ-cyclodextrins studied by HPLC and NMR

The NMR spectra of [2.2]paracyclophane with β- or γ-cyclodextrin in DMF-d₇ at room temperature do not show significant complexation, while HPLC of the complexes in mixed H₂O:alcohol solvents demonstrate complexation with different stoichiometries. At 243 K in DMF solution the H3 and H5 NMR signals of γ-cyclodextrin (but not β) exhibit complexation-induced chemical shifts denoting complex formation. According to HPLC, at room temperature the [2.2]paracyclophane complex with β-cyclodextrin in 20% H₂O:EtOH exhibits 1:2 stoichiometry with K ₁ = 1×10² ± 2, K ₂ = 9.0×10⁴ ± 2×10³ (K = 9×10⁶) while that with γ-cyclodextrin in 50% H₂O:MeOH exhibits 1:1 stoichiometry with K ₁ = 4×10³ ± 150 M⁻¹. Thermodynamic parameters for both complexes have been estimated from the retention time temperature dependence. For the β-cyclodextrin complexation at 25°C ΔG ⁰ _CD is −39.7 kJ mol⁻¹ while ΔH ⁰ _CD and ΔS ⁰ _CD are −88.2 kJ mol⁻¹ and −0.16 kJ mol⁻¹ K⁻¹. For γ-cyclodextrin, the corresponding values are ΔG ⁰ _CD = −20.5 kJ mol⁻¹, ΔH ⁰ _CD = −33.5 kJ mol⁻¹ and ΔS ⁰ _CD = −0.04 kJ mol⁻¹ K⁻¹.      

Antioxidant capacity and larvicidal and antifungal activities of essential oils and extracts from Piper krukoffii

The leaves and twigs of Piper krukoffii, collected in the Carajás National Forest, north Brazil, yielded essential oils (2.0% and 0.8%), the main constituents of which were myristicin (40.3% and 26.7%), apiole (25.4% and 34.1%) and elemicin (2.8% and 3.0%). The antioxidant activities of the oils, methanol extract and its sub-fractions were evaluated. The DPPH EC50 values varied from the ethyl acetate sub-fraction (73.4 +/- 3.7 microg/mL) to the methanol extract (24.9 +/- 0.8 microg/mL), and the ABTS TEAC values ranged in the same order from 265.7 to 349.2 microMol TE/g. These results indicated a significant antioxidant activity for the plant. The lignans (-)-kusunokin, yatein, (-)-hinokin and cubebin were identified in the methanol extract. The hydro-methanolic sub-fraction showed a high value for total phenol content (106.5 +/- 0.7 mg GAE/g), as well as 1H NMR signals for sugar moieties. Crude extracts and sub-fractions were also able to inhibit beta-carotene bleaching, varying from 22.4 to 47.1%. The oils from the leaves and twigs showed strong larvicidal (21.4 and 3.6 microg/mL) and fungicide (0.5 and 0.1 microg/mL) activities.