Dual approach for the colorimetric determination of unamplified microRNAs by using citrate capped gold nanoparticles

The authors describe a method for the colorimetric determination of unamplified microRNA. It is based on the use of citrate-capped gold nanoparticles (AuNPs) and, alternatively, a microRNA-probe hybrid or a magnetically extracted microRNA that serve as stabilizers against the salt-induced aggregation of AuNPs. The absorbance ratios A₅₂₅/A₆₂₅ of the reacted AuNP solutions were used to quantify the amount of microRNA. The assay works in the range of 5–25 pmol microRNA. The lower limit of detection (LOD) is 10 pmol. The performance of the method was tested by detection of microRNA-210-3p in totally extracted urinary microRNA from normal, benign, and bladder cancer subjects. The sensitivity and specificity for qualitative detection of urinary microRNA-210-3p using the assay are 74% and 88% respectively, which is consistent with real time PCR based assays. The assay was applied to the determination of specific microRNA by using its specific oligo targeter or following magnetic isolation of the desired microRNA. The method is simple, cost-efficient, has a short turn-around time and requires minimal equipment and personnel.

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Graphical abstract Schematic of the two detection schemes: In the first approach, matched microRNA hybridizes with its specific probe to stabilize gold nanoparticles (AuNPs) against salt induced aggregation and to leave the red color of the AuNPs unchanged. In the second one, microRNA extracted via magnetic nanoparticles (MNP) stabilizes AuNPs against aggregation.

     

Bioremediation of PCB-contaminated sediments and evaluation of their pre- and post-treatment ecotoxicity

The paper deals with the application of two perspective and promising bioremediation approaches, bioaugmentation and biostimulation, applied to sediment contaminated with polychlo-rinated biphenyls (PCBs) with the aim to enhance biodegradation of PCBs. Sediments were sampled from Strá?sky canal, an industrial waste canal that flows from a former PCB-factory through the Laborec river into the Zemplínska ?írava water reservoir, all located in the eastern part of Slovakia. Bioaugmentation of sediments was performed in microcosms using two bacterial isolates with PCB-degradation ability obtained from the contaminated sediment: Achromobacter xylosoxidans, Stenotrophomonas maltophilia. Biostimulation was performed using an addition of cut plants containing terpenes, known as PCB-inducers (ivy leaves and pine needles). Ecotoxicity of the contaminated sediments was evaluated pre- and post-treatment using biotests of the standard aquatic plant Lemna minor, standard contact test using Lactuca sativa var. capitata, and the bioluminescent bacteria Vibrio fischeri. Biostimulation treatment using ivy leaves revealed higher degradation of detected PCB congeners than that achieved by the addition of pine needles, but moderately higher post-treatment toxicity of the sediment to the bioindicator Lemna minor.     

A New System of Multiple Emulsions with Lamellar Gel Phases from Vegetable Oil

Emulsions are excellent pharmaceutical vehicles used in both the pharmacy and cosmetic industries. Vegetable oils have several effects/benefits on skin and can be used in emulsions to release principal active components for cosmetic purposes. Herein, multiple W/O/W emulsions were formulated in a one-step emulsification method, and the resulting anisotropic structures were characterized by x-ray diffraction measurements. The multiple emulsions obtained were stable and maintained their anisotropic structures over 2 years. WAXS (wide-angle x-ray scattering) measurements of these emulsions suggested that the carbon chains of the surfactant around the globules are disposed in a gel network phase. Furthermore, SAXS (small-angle x-ray scattering) measurements indicated that the surfactant is organized in lamellar layers around the globules. Thus, for the first time, we demonstrated that stable lamellar gel phase multiple emulsions can be made from vegetable oils. In addition to having the advantage of being prepared in one step, these emulsions have desirable characteristics that can be used in the cosmetic industry as natural active principles with low surfactant concentration and the unique features of multiple emulsions with gel phases.     

Osmolyte Type and the Osmolarity Level Affect Chondrogenesis of Mesenchymal Stem Cells

The inductive effects of increased osmolarity on chondrogenesis are well approved. However, the effects of the osmolyte agent invoked to induce hyperosmolarity are largely neglected. Herein, we scrutinized how hyperosmotic conditions acquired by addition of different osmolytes would impact chondrogenesis. We briefly assessed whether such conditions would differentially affect hypertrophy and angiogenesis during MSC chondrogenesis. Chondrogenic and hypertrophic marker expression along with VEGF secretion during adipose-derived (AD)-MSC chondrogenesis under three osmolarity levels (350, 450, and 550 mOsm) using three different osmolytes (NaCl, sorbitol, and PEG) were assessed. MTT assay, qRT-PCR, immunocytochemistry, Alcian Blue staining, ELISA, and ALP assays proved osmolyte-type dependent effects of hyperosmolarity on chondrogenesis, hypertrophy, and angiogenesis. At same osmolarity level, PEG had least cytotoxic/cytostatic effect and most prohibitive effects on angiogenesis. As expected, all hyperosmolar conditions led to enhanced chondrogenesis with slightly varying degrees. PEG and sorbitol had higher chondro-promotive and hypertrophy-suppressive effects compared to NaCl, while NaCl had exacerbated hypertrophy. We observed that TonEBP was involved in osmoadaptation of all treatments in varying degrees. Of importance, we highlighted differential effects of hyperosmolarity obtained by different osmolytes on the efficacy of chondrogenesis and more remarkably on the induction/suppression of cartilage pathologic markers. Our study underlies the need for a more vigilant exploitation of physicobiochemical inducers in order to maximize chondrogenesis while restraining unwanted hypertrophy and angiogenesis.     

Natural Product Inhibition and Enzyme Kinetics Related to Phylogenetic Characterization for Bacterial Peptidyl-tRNA Hydrolase 1

With the relentless development of drug resistance and re-emergence of many pathogenic bacteria, the need for new antibiotics and new antibiotic targets is urgent and growing. Bacterial peptidyl-tRNA hydrolase, Pth1, is emerging as a promising new target for antibiotic development. From the conserved core and high degree of structural similarity, broad-spectrum inhibition is postulated. However, Pth1 small-molecule inhibition is still in the earliest stages. Focusing on pathogenic bacteria, herein we report the phylogenetic classification of Pth1 and natural product inhibition spanning phylogenetic space. While broad-spectrum inhibition is found, narrow-spectrum and even potentially clade-specific inhibition is more frequently observed. Additionally reported are enzyme kinetics and general in vitro Pth1 solubility that follow phylogenetic boundaries along with identification of key residues in the gate loop region that appear to govern both. The studies presented here demonstrate the sizeable potential for small-molecule inhibition of Pth1, improve understanding of Pth enzymes, and advance Pth1 as a much-needed novel antibiotic target.     

Pd/C‐Catalyzed Carbonylative Esterification of Aryl Halides with Alcohols by Using Oxiranes as CO Sources

A carbonylative esterification reaction between aryl bromides and alcohols, promoted by Pd/C and NaF in the presence of oxiranes, has been developed. In this process, oxiranes serve as sources of carbon monoxide by their conversion to aldehydes through a palladium‐promoted Meinwald rearrangement pathway. Intramolecular versions of this process serve as methods for the synthesis of lactones and phthalimides.     

Harmless glucose-modified ruthenium complexes suppressing cell migration of highly invasive cancer cell lines

Glucose-substituted ruthenium complexes [(η⁶-benzyl-glucose)RuCp*]⁺Cl⁻, where Cp* = η⁵-C₅Me₅; benzyl-glucose = peracetylated benzyl β-d -glucopyranoside ( 1 ), benzyl β-d -glucopyranoside ( 2 ), have been prepared and used as efficient antimigration and anti-invasive agents against metastatic breast cancer cells (MDA-MB-231) and cisplatin-resistant ovarian cancer cells (SK-OV-3). In addition, these complexes were found to be essentially non-toxic against non-cancerous human kidney cells (HEK293).     

An Anticancer PtIV Prodrug That Acts by Mechanisms Involving DNA Damage and Different Epigenetic Effects

Dual- or multi-action Pt^IV prodrugs represent a new generation of platinum anticancer drugs. The important property of these Pt^IV prodrugs is that their antitumor action combines several different mechanisms owing to the presence of biologically active axial ligands. This work describes the synthesis and some biological properties of a “triple-action” prodrug that releases in cancer cells cisplatin and two different epigenetically acting moieties, octanoate and phenylbutyrate. It is demonstrated, with the aid of modern methods of molecular and cellular biology and pharmacology, that the presence of three different functionalities in a single molecule of the Pt^IV prodrug results in a selective and high potency in tumor cells including those resistant to cisplatin [the IC₅₀ values in the screened malignant cell lines ranged from as low as 9 nm (HCT-116) to 74 nm (MDA-MB-231)]. It is also demonstrated that cellular activation of the Pt^IV prodrug results in covalent modification of DNA through the release of the platinum moiety accompanied by inhibition of the activity of histone deacetylases caused by phenylbutyrate and by global hypermethylation of DNA by octanoate. Thus, the Pt^IV prodrug introduced in this study acts as a true “multi-action” prodrug, which is over two orders of magnitude more active than clinically used cisplatin, in both 2D monolayer culture and 3D spheroid cancer cells.     

Nucleation of Polypropylene with Gold Nanoparticles. Part 1: Introduction of Sandwich Method for Evaluation of Very Weak Nucleation Activity

Although gold particles are known to nucleate isotactic polypropylene (PP), the nucleating effect of chemically pure 5 nm Au, prepared in vacuum sputter coater, was found to be hardly observable. In order to detect such a weak effect, we deposited a homogeneous layer of Au nanoparticles between thin PP films and evaluated the nucleation activity by a combination of three independent methods: polarized light microscopy (PLM), differential scanning calorimetry (DSC), and 2D wide-angle X-ray scattering (2D-WAXS). This new technique, which was called sandwich method, allowed us to demonstrate that gold nanoparticles were able to nucleate PP crystallization, although the effect was much weaker than that produced by commercial α-nucleant [1,2,3,4-bis(3,4-dimethylbenzylidene)sorbitol] and β-nucleant (N,N-Dicyclohexyl-2,6-naphthalene dicarboxamide). The sandwich method appeared to be quite universal and applicable for any micro-sized nucleants or nanonucleants.