Characterization of gem-difluoropropargyl synthons through HF loss from protonated molecules in methane chemical ionization mass spectra

Electron impact and methane chemical ionization mass spectra were obtained following gas chromatography/mass spectrometry for several gem-difluoropropargyl compounds, which had been synthesized as potential intermediates for synthesis of gem-difluoromethylene-containing C-3 acetylenes. EI spectra were variable with respect to the presentation of molecular ions, depending on substituent functional groups present. Methane-CI spectra were characterized by loss of 19 mass units from molecular weight with all compounds examined. These [M − 19]⁺ ions often presented as base peaks of the CI spectra, and were more reliably present and abundant than [M + 1]⁺ ions for these compounds. These ions could have been formed by elimination of HF from the protonated molecules under conditions of methane chemical ionization.     

3,4‐Di­hydro‐6‐methyl‐3‐β‐d‐ribo­furan­osyl‐4,5′‐cyclo‐9H‐imidazo[1,2‐a]­purin‐9‐one hydrate

In the title compound, C₁₃H₁₃N₅O₄·H₂O (4,5′‐cyclo­wyosine·H₂O), the cyclization forces a syn arrangement of the aglycon with respect to the sugar moiety. The ribo­furan­ose part of the mol­ecule displays a β‐d configuration with an envelope C1′‐endo pucker. The mol­ecules are arranged in columns along the short a axis and are linked to water mol­ecules through O—H?O and O—H?N hydrogen bonds.     

Anionic carbonyl complexes of the group VI transition metals with sulfur containing ligands

Anionic complexes of the type [M(CO)₄(dpet)]^? (where M is Cr, Mo or W and dpet is the anion of 2-(diphenylphosphino)ethanthiol) are readily prepared by the reaction of the Tl(dpet) and [M(CO)₅X]^? anions (X = halogen). These complex anions appear to have the normal octahedral geometry with the dpet ligand coordinated through both the P and S atoms. When treated with methyl or allyl halides, neutral complexes of the type M(CO)₄(dpet—R) are formed (where R is an allyl or methyl group now bound to the sulfur atom). By treating Tl^I salts of o-aminothiophenol (atp), o-methylmercaptophenol (nmp) and methylxanthic acid (mxt), with [M(CO)₅]^? anions, the respective complexes [M(CO)₄(atp)]^?, [M(CO)₄(mmp)]^? and [M(CO)₅(mxt)]^? are formed.     

Strong coupling expansion for classical statistical dynamics

We discuss the simple, randomly driven systemdx/dt = –x –x³ +f(t), wheref(t) is a Gaussian random function or stirring force with f(t)f(t) = (t – t). We show how to obtain approximately the coefficients of the expansion of the equal-time Green's functions as power series in (1/R)ⁿ, whereR is the internal Reynolds number ()^1/2/, by using a new expansion for the path integral representation of the generating functional for the correlation functions. Exploiting the fact that the action for the randomly driven system is related to that of a quantum mechanical anharmonic oscillator with Hamiltonianp ²/2 +m ² x ²/2 +vx ⁴ +x ⁶/2, we evaluate the path integral on a lattice by assuming that thex ⁶ term dominates the action. This gives an expansion of the lattice theory Green's functions as power series in 1/(a)^1/3, wherea is the lattice spacing. Using Padé approximants to extrapolate toa = 0, we obtain the desired large-Reynolds-number expansion of the two-point function.Supported financially by the National Science Foundation and the U.S. Department of Energy.     

Bis(tetramethylammonium) hexaaquadodeca‐μ‐bromo‐octahedro‐hexatantalum tetrabromide dihydrate

The novel title compound, [(CH₃)₄N]₂[Ta₆Br₁₂(H₂O)₆]Br₄·2H₂O, with a [Ta₆Br₁₂]²⁺ cluster unit, has been prepared and structurally characterized. The compound crystallizes in space group C2/c, with a twofold axis passing through the cluster and the centre of symmetry located between the clusters. The nearest neighbouring cluster units are aligned along the crystallographic c axis, forming a one‐dimensional chain pattern.     

Crystal structure of synthetic Cu3SeO4(OH)4

Summary The crystal structure of synthetic Cu₃SeO₄(OH)₄ was determined by single crystal X-ray methods:a=8.382 (2) Å,b=6.087 (1) Å,c=12.285 (2) Å,V=626.8 ų,Z=4, space group Pnma,R=0.026,R _w =0.021 for 1255 independent reflections (sin / 0.8 Å^–1). The crystal structure is isotypic to that of the mineral antlerite, Cu₃SO₄(OH)₄. The copper atoms are Jahn-Teller distorted with Cu^[4+2]O₆ polyhedra forming triple chains along [010]. These chains are linked via SeO₄ tetrahedra and weak hydrogen bonds to a framework structure.

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Die Kristallstruktur von synthetischem Cu₃SeO₄(OH)₄

Zusammenfassung Die Kristallstruktur von synthetischem Cu₃SeO₄(OH)₄ wurde mittels Einkristall-Röntgenmethoden ermittelt:a=8.382 (2) Å,b=6.087 (1) Å,c=12.285 (2) Å,V=626.8 ų,Z=4, Raumgruppe Pnma,R=0.026,R _w =0.021 für 1255 unabhängige Reflexe (sin / 0.8 Å^–1). Die Kristallstruktur ist isotyp mit der des Minerals Antlerit, Cu₃SO₄(OH)₄. Die Kupferatome sind Jahn-Teller-verzerrt, die Cu^[4+2]O₆ Polyeder bilden Dreierketten entlang [010]. Diese Ketten sind über SeO₄-Tetraeder und schwache Wasserstoffbrücken zu einer Gerüststruktur verbunden.

     

RNA-catalyzed RNA ligation on an external RNA template

Variants of the hc ligase ribozyme, which catalyzes ligation of the 3' end of an RNA substrate to the 5' end of the ribozyme, were utilized to evolve a ribozyme that catalyzes ligation reactions on an external RNA template. The evolved ribozyme catalyzes the joining of an oligonucleotide 3'-hydroxyl to the 5'-triphosphate of an RNA hairpin molecule. The ribozyme can also utilize various substrate sequences, demonstrating a largely sequence-independent mechanism for substrate recognition. The ribozyme also carries out the ligation of two oligonucleotides that are bound at adjacent positions on a complementary template. Finally, it catalyzes addition of mononucleoside 5'-triphosphates onto the 3' end of an oligonucleotide primer in a template-dependent manner. The development of ribozymes that catalyze polymerase-type reactions contributes to the notion that an RNA world could have existed during the early history of life on Earth.     

A total synthesis of phomactin A

A total synthesis of phomactin A (1) based on a Cr(II)/Ni(II) macrocyclisation from the aldehyde vinyl iodide 11, leading to 12, followed by elaboration of the epoxyketone 16, which then undergoes spontaneous pyran-hemiacetal formation on deprotection, is described.     

Fourier transform infrared studies of alternate acid-amine Langmuir-Blodgett films with pyroelectric properties

FTIR-RAIRS and ATR techniques are shown to provide a powerful means of investigating the molecular behaviour responsible for the pyroelectric properties of organic monolayer assemblies on silicon and aluminised glass. Spectral changes, associated with either proton transfer or head group rearrangement, are well correlated with the level of pyroelectric response for two different devices. The technique promises to be extremely important for the elucidation of the microscopic properties of molecular electronic devices.     

Marine Metabolites and Metal Ion Chelation: The Facts and the Fantasies

The marine environment is a seemingly inexhaustible treasury of organisms whose secondary metabolites bear witness to the lavishness and inventiveness with which nature is able to manipulate molecular architecture. But to what purpose are these diverse and often grotesque compounds produced? This review is founded on the premise that some of them may be involved in the uptake and transport of metal ions present in the aquatic milieu. Many metabolites produced by terrestrial organisms are known to act as ionophores, but the case for similar behavior by their marine counterparts is far hazier. Notwithstanding the relative abundance of certain metal ions in the oceans, and of metabolite structures possessing features that should facilitate the chelation of metal ions, few attempts to establish a connection between these two phenomena have been reported. We have whittled down the voluminous literature of natural products derived from marine sources to expose a core of observations and speculations germane to our premise. These facts and fantasies are evaluated in this review. A mere handful of metal-containing complexes has actually been isolated; furthermore, attempts to prepare such complexes in vitro are rare, and spectroscopic evidence for metal–metabolite interactions, whether in vivo or in vitro, is not common. Only with the vanadium-sequestering tunichromes does a logical (but by no means complete) picture begin to emerge. In several other cases, the plausibility of metal chelation, though mooted by authors, remains unsupported by experimental evidence. However, continuing efforts to obtain structural, and particularly conformational, information on the metabolites by means of X-ray crystallography, nuclear magnetic resonance spectroscopy, and molecular mechanics calculations would seem to provide the key to a rational approach to this neglected topic. On the basis of recent studies dealing with such structural aspects, we present a selection of candidate compounds, some of which are the targets of our own synthetic attentions, whose potential for binding to metal cations merits further research.