Integrated biological–chemical approach for the isolation and selection of polyaromatic mutagens in surface waters

Many environmental mutagens, including polyaromatic compounds are present in surface waters, often in complex mixtures and at low concentrations. The present study provides and applies a novel, integrated approach to isolate polyaromatic mutagens in river water using a sample from the River Elbe. The sample was taken downstream of industrial discharges using blue rayon (BR) as a passive sampler that selectively adsorbs polyaromatic compounds and was subjected to effect-directed fractionation in order to characterise the compounds causing the detected effect(s). The procedure relies on three complementary fractionation steps, the Ames fluctuation assay with strains TA98, YG1024 and YG1041 with and without S9 activation and analytical screening. Several mutagenic fractions were isolated by combining mutagenicity testing with fractionation. The enhanced mutagenicity in the nitroreductase and/or O-acetyltransferase overexpressing strains YG1024 and YG1041 strains suggested amino- and/or nitro-compounds causing mutagenicity in several fractions. Analytical screening of mutagenic fractions with LC-HRMS/MS provided a list of molecular formulas typically containing one to ten nitrogen and at least two oxygen atoms supporting the presence of amino and nitro-compounds in the mutagenic fractions.

Assessing calves as carriers of Cryptosporidium and Giardia with zoonotic potential on dairy and beef farms within a water catchment area by mutation scanning

In the present study, we undertook a molecular epidemiological survey of Cryptosporidium and Giardia in calves on three dairy and two beef farms within an open drinking water catchment area (Melbourne, Australia). Faecal samples (n = 474) were collected from calves at two time points (5 months apart) and tested using a PCR‐based mutation scanning‐targeted sequencing phylogenetic approach, employing regions within the genes of small subunit (SSU) of ribosomal RNA (designated partial SSU), 60 kDa glycoprotein (pgp60) and triose phosphate isomerase (ptpi) as genetic markers. Using partial SSU, the C. bovis, C. parvum, C. ryanae and a new genotype of Cryptosporidium were characterised from totals of 74 (15.6%), 35 (7.3%), 37 (7.8%) and 9 (1.9%) samples, respectively. Using pgp60, C. parvum genotype IIa subgenotype A18G3R1 was detected in 29 samples. Using ptpi, G. duodenalis assemblages A and E were detected in totals of 10 (2.1%) and 130 (27.4%) samples, respectively. The present study showed that a considerable proportion of dairy and beef calves in this open water catchment region excreted Cryptosporidium (i.e. subgenotype IIaA18G3R1) and Giardia (e.g. assemblage A) that are consistent with those infecting humans, inferring that they are of zoonotic importance. Future work should focus on exploring, in a temporal and spatial way, whether these parasites occur in the environment and water of the catchment reservoir.     

The possible discovery of neutron activation in 1910

One-hundred-two years ago, on 21 April 1910, the Austrian chemist Carl Auer von Welsbach published a short comment on a fundamental discovery he had made in the field of nuclear sciences. He reported that “jonium” (²³⁰Th) was able to induce radioactivity in other materials if stored in contact with the ionium sample. He was well aware that this observation was “not quite in agreement with current theories”, because, as a basic principle, a radioactive substance cannot activate an inactive substance. Since he could not remove any superficial contamination, he concluded that the previously inactive materials had become radioactive themselves. Auer von Welsbach predicted that this observation “might be of importance for the mysterious field of radioactivity research”. In fact, we believe that in this experiment he incidentally discovered neutron activation and the production of artificial radionuclides (24 years before I. Curie and F. Joliot) or even induced nuclear fission. The neutron source in his experiments is yet unknown and shall be identified in this project. The neutrons could have been produced from nuclear reactions with impurities of beryllium in the sample. Auer von Welsbach may even have observed nuclear fission 29 years before O. Hahn, F. Straßmann, L. Meitner and O. R. Frisch. In any case, he may have noticed the effects of neutron radiation—22 years before its discovery by J. Chadwick. The main aim of this interdisciplinary project (of which preliminary results are presented herein) is to repeat the 1910-experiment and to identify the source of the neutrons. It will be equally important to investigate the historical reasons and circumstances why Auer’s report remained mostly uncommented in the scientific community. The hypothetical consequences are worth discussion: Auer’s publication could have started the “nuclear age” much earlier than it finally began, with all the consequences for mankind.     

Instrumental neutron absorption activation analysis

We present and discuss a modification of instrumental neutron activation analysis (INAA) that is sensitive for nuclides that do not yield (suitable) activation products but have high cross sections for neutron absorption. Their presence in a sample may thwart INAA by neutron flux suppression inside the sample, but they remain undetected and thus unnoticed by the analyst. In particular, this refers to Li, B, Cd and Gd. The proposed method—instrumental neutron absorption activation analysis (INAAA)—takes advantage of the flux depression inside the sample caused by the neutron absorbers. It is made visible by addition of an activatable nuclide (indicator). The concentration of the neutron absorber (analyte) causes a decrease in activity of the indicator. The activity difference between a mixed sample (sample plus indicator) and the pure indicator carries the analytical information. The calibration curve hence follows a reciprocal exponential function. In a proof-of-principle experiment, the applicability for the quantification of boron was exemplified. In presence of only one neutron absorber (whose nature is known), INAAA can be applied easily for quantification of the analyte in powdered or liquid samples. Although INAAA is no trace sensitive method, it has the potential to increase the reliability of INAA analyses by fast and straightforward quality control (even in presence of two or more neutron absorbing nuclides). It is especially suited for research reactors that do not operate a prompt gamma neutron activation analysis (PGNAA) station.     

Feasibility study for production of 99mTc by neutron irradiation of MoO3 in a 250 kW TRIGA Mark II reactor

The subject of this paper is to explore the possibility to obtain ^99mTc from activation of ⁹⁸Mo, using the TRIGA Mark II low flux research reactor (Vienna, Austria). Irradiation of both natural and enriched in ⁹⁸Mo molybdenum oxides was compared. Aims of this work included the determination of neutron fluxes and ⁹⁸Mo(n, γ)⁹⁹Mo reaction effective cross section in the TRIGA Mark II reactor irradiation channels, calculation of ⁹⁹Mo specific activities, determination of optimal irradiation conditions for the subsequent ^99mTc separation from MoO₃ targets using concentrating technologies.     

Targeting the Substrate Binding Site of E. coli Nitrile Reductase QueF by Modeling,Substrate and Enzyme Engineering

Nitrile reductase QueF catalyzes the reduction of 2‐amino‐5‐cyanopyrrolo[2,3‐d]pyrimidin‐4‐one (preQ₀) to 2‐amino‐5‐aminomethylpyrrolo[2,3‐d]pyrimidin‐4‐one (preQ₁) in the biosynthetic pathway of the hypermodified nucleoside queuosine. It is the only enzyme known to catalyze a reduction of a nitrile to its corresponding primary amine and could therefore expand the toolbox of biocatalytic reactions of nitriles. To evaluate this new oxidoreductase for application in biocatalytic reactions, investigation of its substrate scope is prerequisite. We report here an investigation of the active site binding properties and the substrate scope of nitrile reductase QueF from Escherichia coli. Screenings with simple nitrile structures revealed high substrate specificity. Consequently, binding interactions of the substrate to the active site were identified based on a new homology model of E. coli QueF and modeled complex structures of the natural and non‐natural substrates. Various structural analogues of the natural substrate preQ₀ were synthesized and screened with wild‐type QueF from E. coli and several active site mutants. Two amino acid residues Cys190 and Asp197 were shown to play an essential role in the catalytic mechanism. Three non‐natural substrates were identified and compared to the natural substrate regarding their specific activities by using wild‐type and mutant nitrile reductase.     

The surface charge of regenerated cellulose fibres

In this paper the influence of charged species on the sheet strength of viscose fibres was investigated. Four samples of chemical modified viscose fibres, as well as a reference fibre were studied. The swelling of these viscose fibres and the breaking length of hand sheets have been determined. Comparing the results, the influence of both, swelling and surface charge on the bonding force, is evident. The allocation of the charges, induced by cationic starch and Carboxmethylcellulose, has been analyzed by Titration, attenuated total reflection spectroscopy (ATR) and X-ray photoelectron spectroscopy (XPS). Titration was used to make a first estimation of the charge distribution within the fibre. Using ATR and XPS, more detailed information about the surface charge has been achieved. All measurement methods showed a significant amount of charge on the fibre surface.     

Comparison of multigrid algorithms for high‐order continuous finite element discretizations

We present a comparison of different multigrid approaches for the solution of systems arising from high‐order continuous finite element discretizations of elliptic partial differential equations on complex geometries. We consider the pointwise Jacobi, the Chebyshev‐accelerated Jacobi, and the symmetric successive over‐relaxation smoothers, as well as elementwise block Jacobi smoothing. Three approaches for the multigrid hierarchy are compared: (1) high‐order h‐multigrid, which uses high‐order interpolation and restriction between geometrically coarsened meshes; (2) p‐multigrid, in which the polynomial order is reduced while the mesh remains unchanged, and the interpolation and restriction incorporate the different‐order basis functions; and (3) a first‐order approximation multigrid preconditioner constructed using the nodes of the high‐order discretization. This latter approach is often combined with algebraic multigrid for the low‐order operator and is attractive for high‐order discretizations on unstructured meshes, where geometric coarsening is difficult. Based on a simple performance model, we compare the computational cost of the different approaches. Using scalar test problems in two and three dimensions with constant and varying coefficients, we compare the performance of the different multigrid approaches for polynomial orders up to 16. Overall, both h‐multigrid and p‐multigrid work well; the first‐order approximation is less efficient. For constant coefficients, all smoothers work well. For variable coefficients, Chebyshev and symmetric successive over‐relaxation smoothing outperform Jacobi smoothing. While all of the tested methods converge in a mesh‐independent number of iterations, none of them behaves completely independent of the polynomial order. When multigrid is used as a preconditioner in a Krylov method, the iteration number decreases significantly compared with using multigrid as a solver. Copyright © 2015 John Wiley & Sons, Ltd.     

Regioselective synthesis of 1- and 4-substituted 7-oxopyrazolo[1,5-a]pyrimidine-3-carboxamides

The synthesis of 7-substituted pyrazolo[1,5-a]pyrimidine-3-carboxamides was studied. First, methyl 7-hydroxypyrazolo[1,5-a]pyrimidine-3-carboxylate (5) was prepared in three steps from methyl 5-amino-1H-pyrazole-4-carboxylate (3). Treatment of 5 with POCl₃ gave the highly reactive 7-chloro derivative 10, which was reacted with amines, benzyl alcohol, and phenylboronic acid in the presence of Pd-catalyst to give the corresponding 7-substituted derivatives 11. Hydrolysis of the esters 5 and 11 followed by amidation gave the corresponding carboxamides 16a–h and 15. Regioselectivity of N-alkylation of 7-hydroxypyrazolo[1,5-a]pyrimidine-3-carboxylic acid derivatives 5 and 16 was tunable by the carboxy function. Alkylation of the secondary amides 16a–f furnished the 1-alkyl derivatives 17a–f, whereas the ester 5 and the tertiary amides 16g,h gave the 4-alkyl derivatives 14a–d and 16m,n, selectively.