Implementation and validation of a multi-purpose virtual spectrometer for large systems in complex environments

Despite impressive advances of computational spectroscopy, a robust and user-friendly multi-frequency virtual spectrometer is not yet available. This contribution summarises ongoing efforts in our research group toward the implementation and validation of such a tool with special reference to the building blocks of biomolecules in their natural environment. Our integrated computational tool allows the computation of several kinds of spectra, including vibrational (e.g. IR, VCD), electronic (e.g. absorption, emission, ECD) as well as magnetic resonance (e.g. ESR, NMR) for both closed- and open-shell systems in vacuo and in condensed phases, and includes facilities for drawing, comparing, and modifying all the computed spectra. A number of test cases involving a combination of different spectroscopic ranges will be discussed in order to point out strengths, limitations, and ongoing developments of our research plan.     

Challenges in the simulation of dye-sensitized ZnO solar cells: quantum confinement, alignment of energy levels and excited state nature at the dye/semiconductor interface

We report a first principles density functional theory/time-dependent density functional theory (DFT/TDDFT) computational investigation on a prototypical perylene dye anchored to realistic ZnO nanostructures, approaching the size of the ZnO nanowires used in dye-sensitized solar cells devices. DFT calculations were performed on (ZnO)(n) clusters of increasing size, with n up to 222, of 1.3 × 1.5 × 3.4 nm dimensions, and for the related dye-sensitized models. We show that quantum confinement in the ZnO nanostructures substantially affects the dye/semiconductor alignment of energy levels, with smaller ZnO models providing unfavourable electron injection. An increasing broadening of the dye LUMO is found moving to larger substrates, substantially contributing to the interfacial electronic coupling. TDDFT excited state calculations for the investigated dye@(ZnO)(222) system are fully consistent with experimental data, quantitatively reproducing the red-shift and broadening of the visible absorption spectrum observed for the ZnO-anchored dye compared to the dye in solution. TDDFT calculations on the fully interacting system also introduce a contribution to the dye/semiconductor admixture, due to configurational excited state mixing. Our results highlight the importance of quantum confinement in dye-sensitized ZnO interfaces, and provide the fundamental insight lying at the heart of the associated DSC devices.     

Computational modelling of TiO2 surfaces sensitized by organic dyes with different anchoring groups: adsorption modes, electronic structure and implication for electron injection/recombination

We present a Density Functional Theory investigation aimed to model the possible adsorption modes to the TiO(2) surface of two representative TPA-based dyes, termed L0 and rh-L0, having the two mostly employed anchoring groups, namely the cyanoacrylic and rhodanine-3-acetic acids respectively. The bidentate coordination with proton transfer to a nearby surface oxygen is found to be the energetically favored anchoring mode for both dyes. The calculations show that the different dye anchoring groups give rise to a very different electronic coupling between the dye and the manifold of unoccupied semiconductor states, thus implying different electron injection mechanisms. The strongly coupled L0 dye possibly shows an adiabatic electron injection mechanism, while a non-adiabatic electron injection can be foreseen for the weakly coupled rh-L0 dye. The different orientation with respect to the TiO(2) surface for the two classes of dyes, implying different distances of the donor group from the oxide surface, together with the different electron injection mechanisms might account for the faster recombination reaction measured for the rhodanine-based dyes.     

An efficient high-yield synthesis of D-ribo-phytosphingosine

[Structure: see text] [4R-[4alpha(S),5alpha]]-2,2-Dimethyl-4-(2-oxo-5-vinyl[1,3]dioxolan-4-yl)oxazolidine-3-carboxylic acid tert-butyl ester 5a, obtained in excellent yield and diastereoselectivity by the alpha-hydroxyallylation of the Garner aldehyde (4), is exploited in a novel high-yield synthesis of D-ribo-phytosphingosine (8), using microwave-enhanced cross metathesis as the key step in the chain elongation.     

A theoretical basis for parameter selection and instrument design in comprehensive size-exclusion chromatography x liquid chromatography

A novel approach for the selection of the operational parameters (linear velocity, column length) for a comprehensive 2D-LC system is discussed. Starting point for the calculations is a given second dimension ((2)D) separation and a desired peak capacity for the 2D system. Using the theory developed here the optimum settings for the first dimension ((1)D) column can be derived. Theory clearly indicates that the choice of the (1)D conditions is basically limited to just one set of column lengths and linear velocities. The new method is tested on a comprehensive two-dimensional liquid chromatography system which uses size-exclusion chromatography (SEC) followed by reversed phase liquid chromatography (RPLC). A novel LC/LC interface, using a six-port valve rather than storage loops, joins the two chromatographic dimensions. From a theoretical comparison of continuous low flow and stop-flow operation the latter method was found to be an attractive mode of interfacing. The common idea that stop-flow operation results in additional band broadening is shown to be incorrect. The new interface design operated in the stop-flow mode permits the use of conventional analytical diameter HPLC columns, 7.8mm for SEC and 4.6mm for RPLC. The reversed phase chromatography utilizes a monolithic C-18 modified silica column, which produces fast and efficient analyses. As test samples complex mixtures of peptides were analyzed.     

Analytic Features of Reproducing Groups for the Metaplectic Representation

We introduce the notion of admissible subgroup of relative to the (extended) metaplectic representation via the Wigner distribution. Under mild additional assumptions, it is shown to be equivalent to the fact that the identity holds (weakly) for all We use this equivalence to exhibit classes of admissible subgroups of We also establish some connections with wavelet theory, i.e., with curvelet and contourlet frames.     

Noise-enhanced classical and quantum capacities in communication networks

The unavoidable presence of noise is thought to be one of the major problems to solve in order to pave the way for implementing quantum information technologies in realistic physical platforms. However, here we show a clear example in which noise, in terms of dephasing, may enhance the capability of transmitting not only classical but also quantum information, encoded in quantum systems, through communication networks. In particular, we find analytically and numerically the quantum and classical capacities for a large family of quantum channels and show that these information transmission rates can be strongly enhanced by introducing dephasing noise in the complex network dynamics.     

Vinylidene-quinone methides, photochemical generation and β-silicon effect on reactivity

Irradiation of 2-alkynylphenols resulted in the generation of vinylidene-quinone methides (QMs), which were detected by laser flash photolysis in organic solvents and aqueous acetonitrile. QMs' spectroscopic properties and electrophilicity were both significantly affected by β-silicon effect. The hydration of the alkynyl moiety (22 and 900 M(-1) s(-1)for QM-1 and QM-2, in aqueous acetonitrile) was an acid- and base-catalyzed process. The addition of amines was fast (9.2 × 10(3) M(-1) s(-1) < k(2) < 1.3 × 10(8) M(-1) s(-1)), yielding ketimines, with primary amines.     

Strongly damped wave equations with critical nonlinearities

This note deals with the strongly damped nonlinear wave equation

_utt−Δ_ut−Δu+f(_ut)+g(u)=h$u_{tt}-\Delta u_t-\Delta u+f\left(u_t\right)+g\left(u\right)=h$

with Dirichlet boundary conditions, where both the nonlinearities f$f$ and g$g$ exhibit a critical growth, while h$h$ is a time-independent forcing term. The existence of an exponential attractor of optimal regularity is proven. As a corollary, a regular global attractor of finite fractal dimension is obtained.     

Chemical Identification of Specialized Metabolites from Sulla (Hedysarum coronarium L.) Collected in Southern Italy

Sulla (Hedysarum coronarium L.) is a biennal forage legume originated from the Mediterranean basin and used for animal feeding due to its high forage quality and palatability. Several species of Hedysarum have been considered for their nutritional, pharmaceutical, and biological properties, and different applications have been reported, both for human consumption and animal nutrition. Although a systematic investigation of the chemical constituents of Hedysarum spp. has been performed in order to provide chemotaxonomic evidences for the genus and to support the pharmacological application of several species within the genus, few data are available on the chemical constituents of H. coronarium, and only the content of condensed tannins and flavonoids in leaves has been previously reported. In the present paper, results from a detailed chemical analysis of the extracts from the leaves and flowers of H. coronarium grown wild in southern Italy are presented. Identification of the main specialized metabolites within the chemical classes of flavonoids, proanthocyanidins and saponins, is described, including considerations on their content in the two plant organs. Information acquired from this study expands the knowledge on H. coronarium as a source of valuable phytochemicals for different applications in human and animal health and nutrition.