Analysis of chemical shift changes reveals the binding modes of isoindolinone inhibitors of the MDM2-p53 interaction

In this study we present a method for defining the binding modes of a set of structurally related isoindolinone inhibitors of the MDM2-p53 interaction. This approach derives the location and orientation of isoindolinone binding, based on an analysis of the patterns of magnitude and direction of chemical shift perturbations for a series of inhibitors of the MDM2-p53 interaction. The MDM2-p53 complex is an attractive target for therapeutic intervention in cancer cells with intact tumor suppressor p53, as it offers the possibility of releasing p53 by blocking the MDM2-p53 binding site with a small molecule antagonist to promote apoptosis. Isoindolinones are a novel class of MDM2-antagonists of moderate affinity, which still require the development of more potent candidates for clinical applications. As the applicability of conventional structural methods to this system is limited by a number of fundamental factors, the exploitation of the information contained in chemical shift perturbations has offered a useful route to obtaining structural information to guide the development of more potent compounds. For a set of 12 structurally related isoindolinones, the data suggests 4 different orientations of binding, caused by subtle changes in the chemical structure of the inhibitors.     

Efficient, mild, parallel and purification-free synthesis of aryl ethers via the Mitsunobu reaction

A wide range of commercial diazodicarboxylates and phosphines were screened in an attempt to find purification-free conditions for application in parallel synthesis. The combination of immobilized triphenylphosphine and TMAD proved to be suitable for the synthesis of aryl ethers via the Mitsunobu reaction. Nine ethers were synthesized in good yield and excellent purity, the purification being limited to a filtration step.     

Lifetime prediction of a blue PE100 water pipe

The traditional method to assess the lifetime of plastic pipes is based on hydrostatic pressure testing. A complementary approach has been conducted to monitor the depletion of antioxidants and initiation of thermo-oxidative degradation on a PE100 blue water pipe that had been exposed to hydrostatic pressure in water at low test temperatures (maximum 80 °C).Depletion of antioxidants was monitored using OIT testing and initiation of thermo-oxidative degradation was assessed by iodometric detection of hydroperoxides. An empirical model based on the Arrhenius fit of the data was developed to extrapolate the lifetime of the PE100 pipe material at various service temperatures (10-25 °C). Associated activation energies, E_a, were determined and appeared to be in line with the values obtained from experiments carried out at low test temperatures. The combination of pressure testing and chemical analyses proved to be a very powerful tool to extrapolate the lifetime of plastic pipes.     

A Novel Coordination Polymer Based on Decavanadate Units Linked by Copper(II) Ethylenediamine Complexes

Summary: A novel coordination polymer[{Cu(en)₂}(V₁₀O₂₈)]_n · 2n[Cu(en)₂(H₂O)] · 2n(H₃BO₃) · 2n(H₂O) was obtained by hydrothermal reaction. The compound crystallizes in the monoclinic crystal system, in the C2/c space group, with a = 26.490 (3) Å; b = 11.6558 (11) Å; c = 19.8426 (19) Å; β = 124.011 (1)°; V = 5078.6(8) ų. The solid structure is formed by polymeric chains, [Cu(en)₂(H₂O)]²⁺ cations, and boric acid and water solvate molecules, stabilized through a multiple hydrogen bond network.     

Complexing Polymer Films in The Preparation of Modified Electrodes for Detection of Metal Ions

Summary: The complexing properties of poly (3-(pyrrol-1-yl)propylmalonic acid) (poly1) and poly(N,N′-ethylenebis[N-[(3-(pyrrole-1-yl)propyl) carbamoyl) methyl]-glycine (poly2) coated electrodes (C|poly1 and C|poly2) towards Cu(II), Pb(II), Hg(II) and Cd(II) cations using the open circuit chemical preconcentration-anodic stripping technique were studied. Sorption process of metal cations onto complexing surfaces was readily investigated through the combination of a chemical pre-concentration-anodic stripping technique with a Langmuir isotherm model. The modified electrodes were used for the voltammetric determination of Cu(II), Pb(II), Hg(II) and Cd(II) ions, giving low detection limits for Cu(II) (5 × 10⁻⁹ mol L⁻¹) and Pb(II) (5 × 10⁻¹⁰ mol L⁻¹). The ability of the modified electrodes to analyze Cu(II) ions in natural sample has been demonstrated by the analysis of a tap water sample. The results of the preconcentration process under competitive conditions clearly shows that the selectivity of complexing molecular electrode materials can be subtly tuned upon playing on the accumulation time, polymer thickness and/or memory effect of the binding polymers, opening up new avenues towards evolutive and efficient smart sensing materials.     

Vibrational spectroscopic studies of three dimensional host lattices formed by pyrazine bridges between tetracyanonickelate layers

Three dimensional host lattices have been developed by forming bridges with bidentate pyrazine molecules between adjacent tetracyanonickelate polymeric layers of Ni(II) or Cd(II). The Fourier-transform IR and Raman spectra (4000-200 cm^–1) of the compounds with the general formula M(pyz)Ni(CN)₄, (where M = Ni or Cd) are reported. These host lattices can include benzene molecules but it is found that aniline molecules cannot be included in these structures. They, however, form complexes with the formula M(an)₂Ni(CN)₄, by replacing pyrazine ligands. A monodentate pyrazine complex of Cd(II) with the formula Cd(pyz)₂Ni(CN)₄ has also been prepared.     

A hydrogen-1, nitrogen-15, and chlorine-35 NMR coordination study of Lu(ClO4)3 and Lu(NO3)3 in aqueous solvent mixtures

A coordination study of Lu(III) has been carried out for the nitrate and perchlorate salts in aqueous mixtures of acetone-d₆ and Freon-12 by¹H,¹⁵N and³⁵Cl NMR spectroscopy. At temperatures lower than –90°C, proton and ligand exchange are slow enough to permit the direct observation of¹H resonance signals for coordinated and free water molecules, leading to an accurate measure of the Lu(III) hydration number. In perchlorate solution, in the absence of inner-shell ion-pairing, Lu(III) exhibits a maximum coordination number of six over the allowable concentration range of study, contrasting markedly with the report of values of six to nine or greater as determined by a similar NMR method. The absence of contact ion-pairing was confirmed by³⁵Cl NMR chemical shift and linewidth measurements. Extensive ion-pairing was observed in the nitrate solutions as reflected by the lower Lu(III) hydration numbers of two to three in these systems, the observation of two coordinated water signals, and¹⁵N NMR signals for two complexes. The¹H and¹⁵N NMR spectra and the hydration number could be accounted for by the presence of (H₂O)₄Lu(NO₃)²⁺ and (H₂O)₂Lu(NO₃) ₂ ¹⁺ .     

Solution conformation by NMR and molecular modeling of three sulfide-free somatostatin octapeptide analogs compared to angiopeptin

Summary The conformation in dimethylsulfoxide of the somatostatin derivative angiopeptin and of three disulfide-free analogs was estimated by two-dimensional nuclear magnetic resonance spectroscopy at room temperature. The resulting 3D molecular graphics were compared and shown to reflect the observed differences in the inhibition of restenosis after rat aorta balloon injury by these octapeptide inhibitors. Angiopeptin and its active analog 2 displayed a relatively rigid conformation of the cyclic hexapeptide backbone due to the presence of two well-defined hydrogen bonds, further stabilized by a third hydrogen bond outside the ring. No such constraints were detected for the two biologically inactive analogs, which, compared to 2, had a two-atom longer or shorter hexapeptide ring. The well-defined structure of compound 2 may serve as an improved pharmacophore for this new class of drugs.     

Organotransition-Metal Metallacarboranes. 46. Multidecker Sandwiches of the Cobalt Group Metals(,)(1)

The double-decker sandwich complex CpIr(2,3-Et(2)C(2)B(4)H(4)) (1a) was prepared via deprotonation of nido-2,3-Et(2)C(2)B(4)H(6) to its mono- or dianion and reaction with (CpIrCl(2))(2) in THF and isolated as a colorless air-stable solid; the B(4)-chloro derivative 1b was also obtained. Decapitation of 1a and 1b with TMEDA afforded colorless nido-CpIr(2,3-Et(2)C(2)B(3)H(5)) (2a) and its 4-chloro derivative 2b. Chlorination of 1a by Cl(2) or N-chlorosuccinimide gave the symmetrical species CpIr(2,3-Et(2)C(2)B(4)H(3)-5-Cl) (1c), which was decapped to yield nido-CpIr(2,3-Et(2)C(2)B(3)H(4)-5-Cl) (2c). The triple-decker complexes CpIr(2,3-Et(2)C(2)B(3)H(2)-4[6]-Cl)IrCp (3), an orange solid, and dark green CpIr(2,3-Et(2)C(2)B(3)H(2)-4[6]-Cl)CoCp (5) were prepared from 2a and nido-CpCo(2,3-Et(2)C(2)B(3)H(5)) (4a), respectively, by deprotonation and reaction with (CpIrCl(2))(2) in THF. Reaction of the 2c(-) anion with Rh(MeCN)(3)Cl(3) gave the dark green tetradecker complex [CpIr(Et(2)C(2)B(3)H(2)-5-Cl)](2)RhH (6). In an attempt to prepare a heterotrimetallic Co-Rh-Ir tetradecker sandwich, a three-way reaction involving the deprotonated anions derived from CpCo(2,3-Et(2)C(2)B(3)H(4)-5-Cl) (4b) and 2c with Rh(MeCN)(3)Cl(3) was conducted. The desired species CpCo(Et(2)C(2)B(3)H(2)Cl)RhH(Et(2)C(2)B(3)H(2)Cl)IrCp (7) and the tetradeckers [CpCo(Et(2)C(2)B(3)H(2)Cl)](2)RhH (8) and 6 were isolated in small quantities from the product mixture; many other apparent triple-decker and tetradecker products were detected via mass spectroscopy but were not characterized. All new compounds were isolated via column or plate chromatography and characterized via NMR, UV-visible, and mass spectroscopy and by X-ray crystal structure determinations of 1a and 3. Crystal data for 1a: space group C2/c; a = 28.890(5) ?, b = 8.511(2) ?, c = 15.698(4) ?, beta = 107.61(2) degrees; Z = 8; R = 0.049 for 1404 independent reflections having I > 3sigma(I). Crystal data for 3: space group P2(1)/c; a = 11.775(4) ?, b = 15.546(5) ?, c = 15.500(5) ?, beta = 103.16(3) degrees; Z = 4; R = 0.066 for 2635 independent reflections having I > 3sigma(I).