Changes in the heme ligation during folding of a Geobacter sulfurreducens sensor GSU0935

Ligand binding and substitution reactions are important for metalloprotein folding and function. The heme sensor of a methyl-accepting chemotaxis GSU0935 is a c-type cytochrome from the bacterium Geobacter sulfurreducens. The heme domain switches one of its axial ligands from H(2)O to a low-spin ligand, presumably Met, upon reduction. The study analyzes the stability and folding kinetics of the ferric domain. Guanidine hydrochloride denaturation yields the low-spin heme species arising from coordination of the ferric heme by non-native His residues. The population of the low-spin species further increases and then declines during protein refolding. Kinetics and mutational effects suggest that His54, from the N-terminal region of the domain, is the transient ligand to the heme. The capture and release of a non-native ligand within the compact partially-folded structures illustrates the flexibility of the heme environment in GSU0935, which may relate to the domain sensor function.     

Coordination chemistry of diphenylphosphinoferrocenylthioethers on cyclooctadiene and norbornadiene rhodium(i) platforms

Complexes [RhCl(diene)(P,SR)] with chiral ferrocenyl phosphine-thioethers ligands (diene = norbornadiene, NBD, 1(R), or 1,5-cyclooctadiene, COD, 3(R); P,SR = CpFe(1,2-η(5)-C(5)H(3)(PPh(2))(CH(2)SR); R = tBu, Ph, Bz, Et) and the corresponding [Rh(diene)(P,SR)][BF(4)] (diene = NBD, 2(R); COD, 4(R)) have been synthesized from [RhCl(diene)](2) and the appropriate P,SR ligand. The molecular structure of the cationic complexes 2(tBu), 4(Ph) and 4(Bz), determined by single-crystal X-ray diffraction, shows the expected slightly distorted square planar geometry. For the neutral chloride complexes, a combination of experimental IR and computational DFT investigations points to an equally four coordinate square planar geometry with the diene ligand, the chlorine and the phosphorus atoms in the coordination sphere and with a dangling thioether function. However, a second isomeric form featuring a 5-coordinated square planar geometry with the thioether function placed in the axial position is easily accessible in some cases.     

Diffeological Clifford algebras and pseudo-bundles of Clifford modules

Abstract

We consider the diffeological version of the Clifford algebra of a diffeological finite dimensional vector space; we start by commenting on the notion of a diffeological algebra (which is the expected analogue of the usual one) and that of a diffeological module (also an expected counterpart of the usual notion). After considering the natural diffeology of the Clifford algebra, and considering which of its standard properties re-appear in the diffeological context (most of them), we turn to our main interest, which is constructing the pseudo-bundles of Clifford algebras associated to a given (finite dimensional) diffeological vector pseudo-bundle, and those of the usual Clifford modules (the exterior algebras). The substantial difference that emerges with respect to the standard context, and paves the way to various questions that do not have standard analogues, stems from the fact that the notion of a diffeological pseudo-bundle is very different from the usual bundle, and this under two main respects: it may have fibres of different dimensions, and even if it does not, its total and base spaces frequently are not smooth, or even topological, manifolds.     

Triterpene glycosides from the sea cucumber Eupentacta fraudatrix. Structure and cytotoxic action of cucumariosides A2, A7, A9, A10, an, A13 and A14, seven new minor non-sulfated tetraosides and an aglycone with an uncommon 18-hydroxy group

Seven new minor triterpene glycosides, cucumariosides A2 (1), A7 (2), A9 (3), A10 (4), A11 (5), A13 (6) and A14 (7) have been isolated from the Far Eastern sea cucumber Eupentacta fraudatrix. Structures of the glycosides were elucidated by 2D NMR spectroscopy and MS. Glycosides 1-7 belong to the group of cucumariosides A, having linear tetrasaccharide carbohydrate moieties without any sulfate group and possessing 3-O-methyl-D-xylose as a terminal monosaccharide unit. Glycosides 1, 2, 5-7 differ from each other in side chain structures in aglycone moieties, while cucumarioside A10 (4) has a 23,24,25,26,27-pentanorlanostane aglycone with 18(16)-lactone. Cucumarioside A9 (3), having an uncommon 18-hydroxy group, is the second representative of the unique metabolically active glycosides that are regarded as intermediates of glycoside biosynthesis in sea cucumbers. Cytotoxic activities of glycosides 1-7 and cucumarioside A8 (8) against mouse spleen lymphocytes and the cells of the ascite form of mouse Ehrlich carcinoma, along with hemolytic activity against mouse erythrocytes and antifungal activity were studied. Cucumariosides A2 (1), A8 (8) and A13 (6) demonstrated high hemolytic activities. Glycosides 1, 4 and 6 showed moderate cytotoxic activity. Only cucumarioside A8 (8), having an 18-oxymethylene group and a 24(25)-double bond, was very active in all the tests.     

Measures on Classes of Subspaces Affiliated with a von Neumann Algebra

Let ℳ be a von Neumann algebra acting on a Hilbert space H and let S be a dense lineal in H that is affiliated with a von Neumann algebra ℳ. The “topological” definition of measures on the classes of orthoclosed and splitting subspaces of S affiliated with a von Neumann algebra ℳ is given and results on the relationships of these measures to measures on orthoprojections of the algebra ℳ are presented.     

Benzothiadiazole vs. iso-Benzothiadiazole: Synthesis,Electrochemical and Optical Properties of D–A–D Conjugated Molecules Based on Them

This paper presents an improved synthesis of 4,7-dibromobenzo[d][1,2,3]thiadiazole from commercially available reagents. According to quantum-mechanical calculations, benzo[d][1,2,3]thiadiazole (isoBTD) has higher values of E_LUMO and energy band gap (E_g), which indicates high electron conductivity, occurring due to the high stability of the molecule in the excited state. We studied the cross-coupling reactions of this dibromide and found that the highest yields of π-spacer–acceptor–π-spacer type compounds were obtained by means of the Stille reaction. Therefore, 6 new structures of this type have been synthesized. A detailed study of the optical and electrochemical properties of the obtained π-spacer–acceptor–π-spacer type compounds in comparison with isomeric structures based on benzo[c][1,2,5]thiadiazole (BTD) showed a red shift of absorption maxima with lower absorptive and luminescent capacity. However, the addition of the 2,2′-bithiophene fragment as a π-spacer resulted in an unexpected increase of the extinction coefficient in the UV/vis spectra along with a blue shift of both absorption maxima for the isoBTD-based compound as compared to the BTD-based compound. Thus, a thorough selection of components in the designing of appropriate compounds with benzo[d][1,2,3]thiadiazole as an internal acceptor can lead to promising photovoltaic materials.