Interference of Copper(II) ions with Non-covalent Interactions in Uridine or Uridine 5′-Monophosphate Systems with Adenosine,Cytidine, Thymidine and their Monophosphates in Aqueous Solution

Coordination reactions of copper(II) ions and their effect on non-covalent interactions in uridine (Urd) or uridine 5′-monophosphate (UMP) systems with nucleosides (Ado, Cyd, Thd) and nucleotides (AMP and CMP) in aqueous solutions have been studied. At high pH the effective coordination centers are deprotonated N(3) atoms from Urd and Thd, whereas at low pH, the N(3) atoms of pyrimidine nucleosides are blocked for coordination and the metallation sites are endocyclic nitrogen atoms from Ado, Cyd, AMP and CMP. Moreover, at low pH, the main reaction center in nucleotide solutions is the phosphate group. The NMR study has proven the occurrence of non-covalent ion-dipole interactions and stacking interactions in the systems considered. Introduction of a copper ion in the majority of systems causes the disappearance of weak interactions between ligands. The structures of the complexes in solution have been inferred from the equilibrium study: an analysis of the pH range of their occurrence with respect to the pH range of deprotonation of particular groups in the compounds studied, using Vis, EPR and ¹³C as well as ³¹P NMR spectral analysis.     

Fast Marching Method for Calculating Reactive Trajectories for Chemical Reactions

We present a method for computing classical Newtonian trajectories that minimize the path length or transit time from reactant to product. Our approach is based on a generalization of the fast-marching method, which allows us to construct the solution of the Hamilton-Jacobi equation for the action that optimizes the desired quantity. The resulting “reactive paths” can be interpreted as reaction coordinates but, unlike more conventional choices, they contain dynamical information about the chemical system of interest.     

Dispersion of silica nano-particles in sol-gel hybrid resins for fabrication of multi-scale hybrid nanocomposite

Multi-scale hybrid nanocomposites containing both ∼15 nm silica colloids and ∼2 nm oligosiloxanes in a methacryl polymer matrix were newly designed and fabricated. Colloidal silica sols were dispersed in methacryl oligosiloxanes nano-hybrid resins synthesized by sol-gel reaction of methacryloxypropylmethoxysilane and diphenylsilanediol. On the basis of TEM and SANS analyses, it was confirmed that the silica colloids were compatibly dispersed and different sizes of colloidal silica and oligosiloxanes co-exist in the solutions. Multi-scale hybrid nanocomposites fabricated by UV and thermal curing with incorporation of silica colloids in the nano-hybrid materials show enhanced mechanical and thermal characteristics.     

Highly enantioselective Cu-catalysed asymmetric 1,4-addition of diphenylzinc to cyclohexenone

Highly enantioselective Cu-catalysed 1,4-addition of diphenylzinc to cyclohexenone has been achieved for the first time using a monodentate phosphoramidite ligand.     

Ab initio and infrared spectral study of 4′-substituted phenylthiolbenzoates

The geometry of the 4′-cyano-(4′-CNPTB) and the 4′-methoxy-(4′-MePTB) phenylthiolbenzoates were obtained by ab initio calculations employing 6–31G basis set at Hartee-Fock level of theory. The results predict an extended form of the molecules and torsional angle between the phenyl rings at 90.85(6)⁰ and 90.87(3)⁰, respectively. On the basis of vibrational analysis the frequency assignment was carried out. The calculated frequencies were compared with the experimental IR spectral data in carbon tetrachloride, carbon disulfide solutions and in solid state.     

Stabilization of cobalt(II) chloro-complexes with the butanediammonium cation

Summary Cobalt(II) chlorocomplexes with empirical formulae (bnH₂)₂CoCl₆·2H₂O (1) and (bnH₂)₂CoCl₆ (2), where bnH ₂ ²⁺ represents the diprotonated species of putrescine (1,4-butanediamine), were prepared.The visible spectra in the solid state and measurement of the magnetic moments permit the assignation of an octahedral geometry for cobalt in (1) and a tetrahedral geometry for (2).     

Determination of molybdenum, chromium and aluminium in human urine by electrothermal atomic absorption spectrometry using fast-programme methodology

Rapid and direct procedures for the determination of molybdenum, chromium and aluminium in human urine samples are developed. Fast-programme methodology is used to simplify the heating cycles. Hydrogen peroxide, nitric acid and Triton X-100 are added to the urine samples which are directly introduced into the furnace. For molybdenum, two successive injection steps are required due to the low level of this element in the samples analyzed. Calibration is carried out using aqueous standards for aluminium and the standard additions method for both molybdenum and chromium. The reliability of the procedures is checked by analyzing two certified reference materials.     

Determination of aristolochic acid by capillary zone electrophoresis

A simple and rapid capillary zone electrophoresis (CZE) method for the determination of aristolochic acid (AA) in dietary supplements and selected herbs is described. A clear separation of AA from other sample constituents was achieved within 5 minutes without any sample clean up. A mixture of 20 mM-morpholinethanesulphonic acid+10 mM-BisTrisPropane+0.2% hydroxyethylcelullose in 10% methanol serves as a background electrolyte. The linearity, accuracy, intra-assay and detection limit of the developed method are 200–6000 ng/mL, 95–103%, 3.5%, and 50 ng/ml, respectively. Ease of use, sufficient sensitivity and low running cost are the most important attributes of the CZE method. The proposed CZE method was compared with HPLC.     

Studies of the soluble part of oxidised coals

Soluble products obtained from the oxidation of four types of coal, each characterised by different degree of coalification and different degree of sulphur content, are studied. The coals are oxidised with peracetic acid (PAA) and nitric acid. Analyses are performed by Atmospheric Pressure-Temperature Programmed Reduction (AP-TPR) and Fourier Transform Infrared Spectroscopy (FTIR). The soluble products contain much more sulphur than the insoluble products of oxidation. The products obtained from the reaction with HNO₃ contain higher amounts of inorganic sulphur compounds, while those obtained from the reaction with PAA are characterised by an increased content of organic sulphur species.     

Determination of pesticides in waters by capillary gas chromatography with atomic emission detection

Capillary gas chromatography with atomic emission detection (GC-AED) was successfully used to separate and quantify 14 pesticides (organochlorines, organophosphorus compounds and pyrethrins) in water samples after liquid-liquid extraction with ethyl acetate. Monitoring the emission lines for elements such as chlorine, bromine and sulfur ensures nearly specific chromatograms for these elements, and markedly increases selectivity. Calibration curves were obtained by plotting peak area versus concentration and the correlation coefficients relating to linearity were at least 0.999. Each chromatographic separation takes 21 min and, since two injections are necessary, it requires approximately 1 h to analyze one sample. The method shows a precision of 4.3-8.2% (RSD), depending on the compound. The application of liquid-liquid extraction with ethyl acetate led to recoveries from spiked samples ranging from 76 to 113%. The sensitivity and linearity for the elements chlorine, sulfur, nitrogen and phosphorus were checked under the optimized conditions at their customary emission wavelength. The sensitivity and linearity for these compounds decreased in the order (atom and emission wavelength) Cl (479 nm)>S (181 nm)>P (178 nm)>N (174 nm). A study of the GC-AED system's response to chlorine concentration in eight pesticide molecules was performed and a linear relationship was found with a correlation coefficient of 0.987.