Ab initio CPHF calculations of the static polarizability and second hyperpolarizability of small molecules: Comparisons between standard and moderately large basis sets augmented with diffuse functions

Static polarizability and second hyperpolarizability have been calculated for a number of small molecules? CO₂, OCS, CS₂, C₂H₂, C₂H₆, C₃H₈, cyclo-C₃H₆, C₃H₄, C₃H₆, SiH₄, Si₂H₆? in the framework of the coupled-perturbed Hartree-Fock (CPHF ) theory. The linear and nonlinear coefficients have been calculated with standard Gaussian basis sets and 3-21G bases moderately enlarged with diffuse functions. It is shown that the parallel component of the polarizability saturates rapidly, which suggests that a 3-21G basis containing s and p diffuse functions is sufficient to reproduce α_zz. For the α_xx and α_yy components, a 3-21G basis with s, p, and d diffuse functions is required. In general, the concordance between α computed with this basis set and the experimental static polarizability is at least of the order of 80%. On the contrary, the computation of the second hyperpolarizability with the same basis set for CO₂, CS₂, and C₂H₂ gives values that are 30% too low, compared to the experimental value. Better results are observed for ethane, propane, and cyclopropane for which the error is lower than 50%. The better agreement observed for the saturated compounds can probably be explained by their saturated character.     

New fatty monoesters of erythromycin A

New fatty polyenic (linoleic, linolenic, arachidonic, linoelaidic) mono esters of erythromycin A have been synthesized by using various reagents such as acyl chloride, carboxylic acid anhydride, and mixed carbonic anhydride. These different ways of activating the fatty acid allowed a regioselectivity of esterification at position 2' of the desosamine ring or position 4" of the cladinose ring of erythromycin A. The in vitro antibacterial properties of these new esters against members of the resident flora of the human skin were determined and compared with those of erythromycin A. The number and the stereochemistry of the double bonds seem to play a crucial role in the expression of the in vitro antibacterial activity.     

Étude par spectrographie infrarouge de la structure de l'acide iodique,de l'acide anhydroiodique et des polyiodates alcalins

Résumé L'étude par spectrographie infrarouge entre 2 et 33 des divers produits de déshydratation de l'acide iodique et des nombreux iodates «acides» et «pyroiodates» qu'il donne avec les iodates alcalins montre l'existence de ponts I-O-I analogues à ceux qui existent dans l'anhydride iodique I₂O₅. Ces liaisons se caractérisent dans la région explorée par deux groupes de bandes fortes à 400–460 cm^–1 et à 515–646 cm^–1, c'est-à-dire en dehors des régions d'absorption caractéristiques des groupements IO₂ ou IO₃.

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Summary The infrared spectrographic study between 2 and 33, of various products of dehydration of iodic acid and numerous acid iodates and pyroiodates which it yields with alkaline iodates reveals the existence of I-O-I bridges analogous to those in I₂O₅. In the regions explored, these links are characterized by two groups of strong bands at 400–460 cm^–1 and at 515–646 cm^–1, i. e. beyond the absorption regions characteristic of the IO₂ or IO₃ groups.

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Zusammenfassung Die IR-spektrographische Untersuchung verschiedener durch Wasserabspaltung aus Jodsäure hergestellter Produkte, zahlreicher saurer Salze und mit Alkalijodaten gebildeter Pyrojodate zwischen 2 und 33 zeigt das Vorhandensein von J-O-J-Brücken, wie sie analog im Jodsäureanhydrid J₂O₅ vorliegen. Charakteristisch für diese Bindung sind im untersuchten Bereich zwei starke Bandengruppen bei 400 bis 460 cm^–1 und bei 515 bis 646 cm^–1, das heißt jenseits des Bereiches der charakteristischen Absorption der Atomgruppen JO2 oder JO3.

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En l'honneur du ProfesseurF. Feigl, pour son 70^e anniversaire.     

Parallel computation of molecular energy gradients on the loosely coupled array of processors (LCAP)

The implementation of the HONDO program on the Loosely Coupled Array of Processors (LCAP) parallel computer system assembled in our laboratory is presented. We discuss a general strategy used to maintain a high level of compatibility between the serial version and the parallel version of the code. We report the implementation of energy-gradient calculation for SCF wavefunctions. The integral and integral derivative programs display high parallel efficiency, and so does the SCF part in the case of very large basis sets.     

Theoretical characterization of charge transport in chromia (alpha-Cr2O3)

Transport of conduction electrons and holes through the lattice of alpha-Cr2O3 (chromia) is modeled as a valence alternation of chromium cations using ab initio electronic structure calculations and electron-transfer theory. In the context of the small polaron model, a cluster approach was used to compute quantities controlling the mobility of localized electrons and holes, i.e., the reorganization energy and the electronic coupling matrix element that enter Marcus' theory. The calculation of the electronic coupling followed the generalized Mulliken-Hush approach using the complete active space self-consistent-field (CASSCF) method and the quasidiabatic method. Our findings indicate that hole mobility is more than three orders of magnitude larger than electron mobility in both (001) and [001] lattice directions. The difference arises mainly from the larger internal reorganization energy calculated for electron-transport relative to hole-transport processes while electronic couplings have similar magnitudes. The much larger hole mobility versus electron mobility in alpha-Cr2O3 is in contrast to similar hole and electron mobilities in hematite alpha-Fe2O3 previously calculated. Our calculations also indicate that the electronic coupling for all charge-transfer processes of interest is smaller than for the corresponding processes in hematite. This variation is attributed to the weaker interaction between the metal 3d states and the O(2p) states in chromia than in hematite, leading to a smaller overlap between the charge-transfer donor and acceptor wave functions and smaller superexchange coupling in chromia. Nevertheless, the weaker coupling in chromia is still sufficiently large to suggest that charge-transport processes in chromia are adiabatic in nature. The electronic coupling is found to depend on both the superexchange interaction through the bridging oxygen atoms and the d-shell electron-spin coupling within the Cr-Cr donor-acceptor pair, while the reorganization energy is essentially independent of the electron-spin coupling.     

PdCl2, a useful catalyst for protection of alcohols as diphenylmethyl (DPM) ethers

Primary, secondary, benzylic and allylic alcohols are efficiently converted to the corresponding diphenylmethyl ethers in the presence of catalytic amounts of PdCl₂.     

Activation of the sulfhydryl group by Mo centers: kinetics of reaction of benzyl radical with a binuclear Mo(micro-SH)Mo complex and with arene and alkane thiols

This paper provides evidence from kinetic experiments and electronic structure calculations of a significantly reduced S-H bond strength in the Mo(micro-SH)Mo function in the homogeneous catalyst model, CpMo(micro-S)(2)(micro-SH)(2)MoCp (1, Cp = eta(5)-cyclopentadienyl). The reactivity of 1 was explored by determination of a rate expression for hydrogen atom abstraction by benzyl radical from 1 (log(k(abs)/M(-)(1) s(-)(1)) = (9.07 +/- 0.38) - (3.62 +/- 0.58)/theta) for comparison with expressions for CH(3)(CH(2))(7)SH, log(k(abs)/M(-)(1) s(-)(1)) = (7.88 +/- 0.35) - (4.64 +/- 0.54)/theta, and for 2-mercaptonaphthalene, log(k(abs)/M(-)(1) s(-)(1)) = (8.21 +/- 0.17) - (4.24 +/- 0.26)/theta (theta = 2.303RT kcal/mol, 2sigma error). The rate constant for hydrogen atom abstraction at 298 K by benzyl radical from 1 is 2 orders of magnitude greater than that from 1-octanethiol, resulting from the predicted (DFT) S-H bond strength of 1 of 73 kcal/mol. The radical CpMo(micro-S)(3)(micro-SH)MoCp, 2, is revealed, from the properties of slow self-reaction, and exclusive cross-combination with reactive benzyl radical, to be a persistent free radical.     

Ab initio molecular dynamics simulations of an excited state of X(-)(H(2)O)(3) (X = Cl, I) complex

Upon excitation of Cl(-)(H(2)O)(3) and I(-)(H(2)O)(3) clusters, the electron transfers from the anionic precursor to the solvent, and then the excess electron is stabilized by polar solvent molecules. This process has been investigated using ab initio molecular dynamics (AIMD) simulations of excited states of Cl(-)(H(2)O)(3) and I(-)(H(2)O)(3) clusters. The AIMD simulation results of Cl(-)(H(2)O)(3) and I(-)(H(2)O)(3) are compared, and they are found to be similar. Because the role of the halogen atom in the photoexcitation mechanism is controversial, we also carried out AIMD simulations for the ground-state bare excess electron -- water trimer [e(-)(H(2)O)(3)] at 300 K, the results of which are similar to those for the excited state of X(-)(H(2)O)(3) with zero kinetic energy at the initial excitation. This indicates that the rearrangement of the complex is closely related to that of e(-)(H(2)O)(3), whereas the role of the halide anion is not as important.     

Integral data compression for FPS 64-BIT processors: Improved I/O and reduced storage

Compression of two-electron integral data is used to reduce integral storage and I/O requirements with FPS M64 Series (formerly FPS-X64) processors. Schemes are developed and implemented in assembly language to compress floating-point values to a fixed-point accuracy, and unsigned integer numbers. The floating-point scheme stores only the significant bits of the mantissa and a short, biased exponent. The unsigned integers are packed into fixed-length fields just long enough to hold the largest value. The packing procedures are tested on FPS-164 and FPS-264 processors (since renamed M64/145 and M64/60 by FPS) and incorporated into HONDO to compress two-electron integral files. Reduction factors of 0.2–0.4 are obtained for floating-point compression and 0.3–0.5 for index packing, with typical overall factors around one-third. The advantages of improved I/O and storage efficiency are accompanied by a small increase in processor time to perform the packing and unpacking. Timing changes for HONDO are presented, and both packing schemes dramatically reduce SCF elapsed times with FPS-264 processors. It is concluded that compression effectively extends external storage capacities, improves I/O efficiency, and can reduce the elapsed time of I/O bound calculations.