Conformational and electronic study of dopamine interacting with the D2 dopamine receptor

We report an exhaustive conformational and electronic study on dopamine (DA) interacting with the D₂ dopamine receptor (D₂DR). For the first time, the complete surface of the conformational potential energy of the complex DA/D₂DR is reported. Such a surface was obtained through the use of QM/MM calculations. A detailed study of the molecular interactions that stabilize and destabilize the different molecular complexes was carried out using two techniques: Quantum Theory of Atoms in Molecules computations and nuclear magnetic shielding constants calculations. A comparative study of the behavior of DA in the gas phase, aqueous solution, and in the active site of D₂DR has allowed us to evaluate the degree of deformation suffered by the ligand and, therefore, analyze how rustic are the lock-key model and the induced fit theory in this case. Our results allow us to propose one of the conformations obtained as the “biologically relevant” conformation of DA when it is interacting with the D₂DR.     

Comparison of a Rapid Light-Induced and Forced Test to Study the Oxidative Stability of White Wines

The oxidation processes of white wines can occur during storage and commercialization due to several factors, and these can negatively affect the color, aroma, and quality of the wine. Wineries should have faster and simpler methods that provide valuable information on oxidation stability of wines and allow fast decision-making procedures, able to trigger suitable technological interventions. Using a portable prototype instrument for light irradiations at different wavelengths and times was considered and evaluated on sensorial, spectrophotometric, and colorimetric parameters of white wines. The sensorial analysis revealed that white and light blue were the most significant, after only 1 h of irradiation. The experimental results showed that hydrogen peroxide could enhance the effect of light treatment, allowing a contemporary evaluation of the oxidation stability of wine against light and chemical stresses. As expected, a good correlation (R² > 0.89) between optical density at 420 nm and b* parameter was highlighted. The synergic effect of light and H₂O₂ was also studied on the hydrolyzable and condensed tannins’ additions to white wine. The proposed methodology could be used to evaluate the oxidative stability of white wines, but also to evaluate the effect of some oenological adjuvants on wine stability.     

Coumarin 314 free radical cation: formation, properties, and reactivity toward phenolic antioxidants

We have explored the photogeneration of the coumarin 314 radical cation by using nanosecond laser excitation at wavelengths longer than 400 nm in benzene, acetonitrile, dichloromethane, and aqueous media. In addition, time-resolved absorption spectroscopy measurements allowed detection of the triplet excited state of coumarin 314 (C(314)) with a maximum absorption at 550 nm in benzene. The triplet excited state has a lifetime of 90 μs in benzene. It is readily quenched by oxygen (k(q) = 5.0 × 10(9) M(-1) s(-1)). From triplet-triplet energy transfer quenching experiments, it is shown that the energy of this triplet excited state is higher than 35 kcal/mol, in accord with the relatively large singlet oxygen quantum yield (Φ(Δ) = 0.25). However, in aqueous media, the coumarin triplet was no longer observed, and instead of that, a long-lived (160 μs in air-equilibrated solutions) free radical cation with a maximum absorbance at 370 nm was detected. The free radical cation generation, which has a quantum yield of 0.2, occurs by electron photoejection. Moreover, density functional theory (DFT) calculations indicate that at least 40% of the electronic density is placed on the nitrogen atom in aqueous media, which explains its lack of reactivity toward oxygen. On the other hand, rate constant values close to the diffusion rate limit in water (>10(9) M(-1) s(-1)) were found for the quenching of the C(314) free radical cation by phenolic antioxidants. The results have been interpreted by an electron-transfer reaction between the phenolic antioxidant and the radical cation where ion pair formation could be involved.     

S-Shaped composition dependence of excess thermodynamic quantities for cyclohexane mixtures with globular alkanes

Expansion coefficients , isothermal compressibilities, thermal pressure coefficients and heat capacities have been measured at 25°C for the cyclohexane+trans-decalin system. An S-shaped composition dependence, positivelnegative for highllow cyclohexane compositions is found for C _p ^E dV ^E /dT and the thermal expansion contribution to C _p ^E namely VT. The thermal motion contribution to C _p ^E , namely C _v is close to zero. The positive excursion of these mixing quantities at high cyclohexane content is anomalous. Correspondingly, the mixing quantity-VT deviates strongly in this region from the predicted equality with H ^E . The literature and this work show that all these excess quantities behave similarly for cyclohexane mixed with cyclooctane, methylcyclohexane and some highly branched alkanes. The unusual composition dependence of the thermodynamic quantities is consistent with order occurring when any large alkane molecule of globular shape is added to cyclohexane. This is speculatively associated with an interference by the globular alkane with the relatively free rotation of cyclohexane molecules.     

Limit cycles and Lie symmetries

Given a planar vector field U which generates the Lie symmetry of some other vector field X, we prove a new criterion to control the stability of the periodic orbits of U. The problem is linked to a classical problem proposed by A.T. Winfree in the seventies about the existence of isochrons of limit cycles (the question suggested by the study of biological clocks), already answered by Guckenheimer using a different terminology. We apply our criterion to give upper bounds of the number of limit cycles for some families of vector fields as well as to provide a class of vector fields with a prescribed number of hyperbolic limit cycles. Finally we show how this procedure solves the problem of the hyperbolicity of periodic orbits in problems where other criteria, like the classical one of the divergence, fail.