Stronger together: Analytical techniques for recombinant adeno associated virus

With recent FDA approval of two recombinant adeno-associated virus (rAAV)-based gene therapies, these vectors have proven that they are suitable to address monogenic diseases. However, rAAVs are relatively new modalities, and their production and therapy costs significantly exceed those of conventional biologics. Thus, significant efforts are made to improve the processes, methods, and techniques used in manufacturing and quality control (QC). Here, we evaluate transmission electron microscopy (TEM), analytical ultracentrifugation (AUC), and two modes of capillary electrophoresis (CE) for their ability to analyze the DNA encapsidated by rAAVs. While TEM and AUC are well-established methods for rAAV, capillary gel electrophoresis (CGE) has been just recently proposed for viral genome sizing. The data presented reflect that samples are very complex, with various DNA species incorporated in the virus, including small fragments as well as DNA that is larger than the targeted transgene. CGE provides a good insight in the filling of rAAVs, but the workflow is tedious and the method is not applicable for the determination of DNA titer, since a procedure for the absolute quantification (e.g., calibration) is not yet established. For estimating the genome titer, we propose a simplified capillary zone electrophoresis approach with minimal sample preparation and short separation times (<5 min/run). Our data show the benefits of using the four techniques combined, since each of them alone is prone to delivering ambiguous results. For this reason, a clear view of the rAAV interior can only be provided by using several analytical methods simultaneously.     

Polymer coating of graphene oxide via reversible addition–fragmentation chain transfer mediated emulsion polymerization

This work describes a versatile method to encapsulate graphene oxide (GO) with polymers using reversible addition‐fragmentation chain transfer (RAFT) mediated emulsion polymerization. A living low molecular weight anionic macro‐RAFT statistical copolymer of sodium styrene sulfonate, acrylic acid, and butyl acrylate (BA) was synthesized using 2‐{[(butylsulfanyl)carbonothioyl] sulfanyl} propanoic acid as the chain transfer agent. GO was dispersed in water by pretreating the surface with poly(allylamine hydrochloride) (PAH), before being stabilized by the addition of the anionic macro‐RAFT copolymer. PAH was used to facilitate the adsorption of the macro‐RAFT copolymer to the GO surface via electrostatic attraction between opposite charges. The dispersed GO sheets were encapsulated with polymer by the free radical emulsion polymerization of methyl methacrylate and BA under starved fed conditions. The polymer shells encapsulating the GO sheets were formed by the chain extension of the adsorbed living macro‐RAFT copolymer. TEM, SEM, FTIR, and AFM were used to confirm the presence of the polymer layer on the surface of the GO. The thickness of the polymer coating can be adjusted by controlling the amount of monomer fed into the system. Partial polymer coatings of the GO could be achieved by varying the amount of PAH. The encapsulated GO was found to be easily dispersed in both aqueous and organic solvents over a range of polarities. © 2015 Wiley Periodicals, Inc. J. Polym. Sci., Part A: Polym. Chem. 2015 , 53, 1413–1421     

A SIMPLICIAL ALGORITHM FOR COMPUTING AN INTEGER ZERO POINT OF A MAPPING WITH THE DIRECTION PRESERVING PROPERTY

A mapping f:Z~n→R~n is said to possess the direction preserving property if fi(x)>0implies fi(y)≥0 for any integer points x and y with ‖x-y‖∞≤1.In this paper,a simplicial algorithm is developed for computing an integer zero point of a mappingwith the direction preserving property.We assume that there is an integer point x~0 withc≤x~0≤d satisfying that max_(1≤i≤n)(x_i-x_i~0)fi(x)>0 for any integer point x withf(x)≠0 on the boundary of H={x∈R~n|c-e≤x≤d e},where c and d are twofinite integer points with c≤d and e=(1,1,…1)~∈R~n.This assumption is impliedby one of two conditions for the existence of an integer zero point of a mapping with thepreserving property in van der Laan et al.(2004).Under this assumption, starting at x~0,the algorithm follows a finite simplicial path and terminates at an integer zero point ofthe mapping.This result has applications in general economic equilibrium models withindivisible commodities.