Specific anion effects on enzymatic activity in nonaqueous media

The present work shows that salt anions affect the activity of Pseudomonas cepacia lipase both in aqueous and in nonaqueous media (NAM) according to a Hofmeister series. The biocatalytic assay in water was the hydrolysis of p-nitrophenyl acetate, whereas the esterification between 1-hexyl-beta-D-galactopyranoside and palmitic acid was followed in an organic solvent. The solid lipase preparations to be used in NAM were obtained through lyophilization in the presence of concentrated solutions of Hofmeister salts (Na2SO4, NaH2PO4/Na2HPO4, NaCl, NaBr, NaI, NaSCN). Salts affect enzyme activity in organic media through two mechanisms: (1) enzyme protection during lyophilization; (2) enzyme activation during the reaction. At least in our case, the latter seems to be more important than the former. The decrease of the activation energy caused by the stabilization of the transition state due to "kosmotropic" anions might be the driving force of enzyme activation. According to the most recent findings, dispersion forces may be responsible of specific anion enzyme activation/deactivation in NAM.     

Generalized Darcy–Oseen resolvent problem

In this paper, we study the well‐posedness of a coupled Darcy–Oseen resolvent problem, describing the fluid flow between free‐fluid domains and porous media separated by a semipermeable membrane. The influence of osmotic effects, induced by the presence of a semipermeable membrane, on the flow velocity is reflected in the transmission conditions on the surface between the free‐fluid domain and the porous medium. To prove the existence of a weak solution of the generalized Darcy–Oseen resolvent system, we consider two auxiliary problems: a mixed Navier–Dirichlet problem for the generalized Oseen resolvent system and Robin problem for an elliptic equation related to the general Darcy equations. © 2016 The Authors Mathematical Methods in the Applied Sciences Published by John Wiley & Sons Ltd.     

Pyridine-based Liquid-Phase Synthesis of Crystalline TiN and ZnSiN2 Nanoparticles

TiN and ZnSiN₂ nanoparticles are obtained via a novel pyridine-based synthesis route. This one-pot liquid-phase route strictly avoids all oxygen sources (including starting materials, surface functionalization, solvents), which is highly relevant in regard of the material purity and material properties. Colloidally stable suspensions of crystalline, small-sized TiN (5.4±0.4 nm) and ZnSiN₂ (5.2±1.1 nm) are instantaneously available from the liquid phase. Elemental analysis and electron energy loss spectroscopy confirm the purity of the compounds and specifically the absence of oxygen. The as-prepared ZnSiN₂ show yellowish emission (500-700 nm) already at room temperature with its maximum at 570 nm.     

Assessing the confidence level of public domain compound activity data and the impact of alternative potency measurements on SAR analysis

Publicly available compound activity data have been analyzed to distinguish between compounds for which single or multiple potency measurements were available and gain insight into data confidence levels. Different potency measurements with defined end points and alternative ways to represent multiple potency values for active compounds have been evaluated in the context of SAR analysis. Approximately 78% of all compounds with multiple potency measurements were found to represent high-confidence data, which corresponded to ～10% of all activity data. The use of different types of potency measurements and alternative representations of multiple potency values changed the SAR information content of compound data sets and resulted in different activity cliff distributions. Thus, the types of activity measurements that were available and how they were used substantially impacted SAR analysis. Compounds with multiple K(i) measurements provided the most reliable basis for SAR exploration.     

Branched and linear poly(ethylene imine)-based conjugates: synthetic modification, characterization, and application

Poly(ethylene imine)s (PEIs) are widely used in different applications, but most extensively investigated as non-viral vector systems. The high ability of cationic PEIs to complex and condense negatively charged DNA and RNA combined with their inherent proton sponge behavior accounts for the excellent efficiency in gene delivery. Further chemical modifications of the polymer expand the application potential, primarily aiming at increased transfection efficiency, cell selectivity and reduced cytotoxicity. Improvements in the synthesis of tailor-made PEIs in combination with new in-depth analytical techniques offer the possibility to produce highly purified polymers with defined structures. The contemporary strategies towards linear and branched poly(ethylene imine)s with modified surface characteristics, PEI-based copolymers as well as conjugates with bioactive molecules will be discussed. In this regard, the versatile branched PEIs have been successfully modified in a statistical manner, whereas the linear counterparts open avenues to design and synthesize well-defined architectures, in order to exploit their high potential in gene delivery.     

Novel access to carbodiphosphoranes in the coordination sphere of group 10 metals: template synthesis and protonation of PCP pincer carbodiphosphorane complexes of C(dppm)2

In a novel template synthesis of carbodiphosphoranes (CDPs), the phosphine functionalized CDP ligand C(dppm)(2) (dppm = Ph(2)PCH(2)PPh(2)) is formed in the coordination sphere of group 10 metals from CS(2) and 4 equivalents of dppm. The products are the PCP pincer complexes [M(Cl)(C(dppm)(2)-κ3P,C,P)]Cl (M = Ni, Pd, Pt) and 2 equivalents of dppmS. The compound C(dppm)(2), which is composed of a divalent carbon atom and two dppm subunits, represents a new PCP-type pincer ligand with the formally neutral carbon Lewis base of the CDP functionality as the central carbon. Treatment of [M(Cl)(C(dppm)(2)-κ3P,C,P)]Cl (M = Pd, Pt) with hydrochloric acid results in protonation at the CDP carbon atom and the formation of the PCP pincer complexes [M(Cl)(CH(dppm)(2)-κ3P,C,P)]Cl(2) (M = Pd, Pt). The PCP pincer ligand [CH(dppm)(2)](+) involves a formally cationic central carbon donor. The reaction of [Ni(Cl)(C(dppm)(2)-κ3P,C,P)]Cl with HCl leads to the extrusion of NiCl(2) and formation of the diprotonated CDP compound [CH(2)(dppm)(2)]Cl(2), from which the monoprotonated conjugate base [CH(dppm)(2)]Cl is obtained upon addition of bases, such as NH(3). The crystal structures of [M(Cl)(C(dppm)(2)-κ3P,C,P)]Cl (M = Ni, Pd, Pt), [Ni(Cl)(C(dppm)(2)-κ3P,C,P)](2)[NiCl(4)], [M(Cl)(CH(dppm)(2)-κ3P,C,P)]Cl(2) (M = Pd, Pt) as well as [CH(2)(dppm)(2)]Cl(2) and [CH(dppm)(2)]Cl are presented. A comparison of the solid state structures reveals interesting features, e.g. infinite supramolecular networks mediated by C-H···Cl hydrogen bond interactions and an unexpected loss of molecular symmetry upon protonation in the complexes [M(CH(dppm)(2)-κ3P,C,P)(Cl)]Cl(2) (M = Pd, Pt) as a result of the flexible ligand backbone. Additionally the new compounds were characterized comprehensively in solution by multinuclear (31)P, (13)C and (1)H NMR spectroscopy: Several spectroscopic parameters show a striking variability in particular regarding the carbodiphosphorane functionality. Furthermore the compound [Ni(Cl)(C(dppm)(2)-κ3P,C,P)]Cl was examined by cyclic voltammetry (CV) and could be shown to display quasi-reversible oxidative as well as reductive behaviour.     

Poly(2‐ethyl‐2‐oxazoline) as Alternative for the Stealth Polymer Poly(ethylene glycol): Comparison of in vitro Cytotoxicity and Hemocompatibility

Limitations of PEG in drug delivery have been reported from clinical trials. PEtOx (0.4–40 kDa) as alternative is synthesized by a living, microwave‐assisted polymerization, and is directly compared to PEG of similar molar mass regarding cytotoxicity and hemocompatibility. In short‐term treatments, both types of polymers are well tolerated even at high concentrations. Moderate concentration and molar mass dependent cytotoxic effects occurred only after long‐term incubation at concentrations higher than therapeutic doses. PEtOx possesses not only an easy route of synthesis and beneficial physicochemical characteristics such as low viscosity and high stability, which are advantageous over PEG, but additionally in vitro toxicology comparable to PEG.

     

Study of disulfide reduction and alkyl chloroformate derivatization of plasma sulfur amino acids using gas chromatography-mass spectrometry

Four disulfide-reducing agents, dithiothreitol (DTT), 2,3-dimercaptopropanesulfonate (DMPS), and the newly tested 2-mercaptoethanesulfonate (MESNA) and Tris(hydroxypropyl)phosphine (THP), were investigated in detail for release of sulfur amino acids in human plasma. After protein precipitation with trichloroacetic acid (TCA), the plasma supernatant was treated with methyl, ethyl, or propyl chloroformate via the well-proven derivatization–extraction technique and the products were subjected to gas chromatographic–mass spectrometric (GC–MS) analysis. All the tested agents proved to be rapid and effective reducing agents for the assay of plasma thiols. When compared with DTT, the novel reducing agents DMPS, MESNA, and THP provided much cleaner extracts and improved analytical performance. Quantification of homocysteine, cysteine, and methionine was performed using their deuterated analogues, whereas other analytes were quantified by means of 4-chlorophenylalanine. Precise and reliable assay of all examined analytes was achieved, irrespective of the chloroformate reagent used. Average relative standard deviations at each analyte level were ≤6%, quantification limits were 0.1–0.2 μmol L⁻¹, recoveries were 94–121%, and linearity was over three orders of magnitude (r ² equal to 0.997–0.998). Validation performed with the THP agent and propyl chloroformate derivatization demonstrated the robustness and reliability of this simple sample-preparation methodology.     

Natural Compounds Isolated from Stachybotrys chartarum Are Potent Inhibitors of Human Protein Kinase CK2

A large number of secondary metabolites have been isolated from the filamentous fungus Stachybotrys chartarum and have been described before. Fourteen of these natural compounds were evaluated in vitro in the present study for their inhibitory activity towards the cancer target CK2. Among these compounds, stachybotrychromene C, stachybotrydial acetate and acetoxystachybotrydial acetate turned out to be potent inhibitors with IC₅₀ values of 0.32 µM, 0.69 µM and 1.86 µM, respectively. The effects of these three compounds on cell proliferation, growth and viability of MCF7 cells, representing human breast adenocarcinoma as well as A427 (human lung carcinoma) and A431 (human epidermoid carcinoma) cells, were tested using EdU assay, IncuCyte^® live-cell imaging and MTT assay. The most active compound in inhibiting MCF7 cell proliferation was acetoxystachybotrydial acetate with an EC₅₀ value of 0.39 µM. In addition, acetoxystachybotrydial acetate turned out to inhibit the growth of all three cell lines completely at a concentration of 1 µM. In contrast, cell viability was impaired only moderately, to 37%, 14% and 23% in MCF7, A427 and A431 cells, respectively.