Structure–Reactivity Relationships in the Hydrogenation of Carbon Dioxide with Ruthenium Complexes Bearing Pyridinylazolato Ligands

Pyridinylazolato (N–N′) ruthenium(II) complexes of the type [(N–N′)RuCl(PMe₃)₃] have been obtained in high yields by treating the corresponding functionalised azolylpyridines with [RuCl₂(PMe₃)₄] in the presence of a base. ¹⁵N NMR spectroscopy was used to elucidate the electronic influence of the substituents attached to the azolyl ring. The findings are in agreement with slight differences in the bond lengths of the ruthenium complexes. Furthermore, the electronic nature of the azolate moiety modulates the catalytic activity of the ruthenium complexes in the hydrogenation of carbon dioxide under supercritical conditions and in the transfer hydrogenation of acetophenone. DFT calculations were performed to shed light on the mechanism of the hydrogenation of carbon dioxide and to clarify the impact of the electronic nature of the pyridinylazolate ligands.     

Nanoscale Control of Polyoxometalate Assembly: A {Mn8W4} Cluster within a {W36Si4Mn10} Cluster Showing a New Type of Isomerism

Two near isomeric clusters containing a novel {Mn₈W₄} Keggin cluster within a [W₃₆Mn₁₀Si₄O₁₃₆(OH)₄(H₂O)8]^24? cluster are reported: K₁₀Li₁₄ [W₃₆Si₄O₁₃₆Mn^II₁₀(OH)₄(H₂O)₈] ( 1 ) and K₁₀Li1_3.5Mn_0.25[W₃₆Si₄O₁₃₆Mn^II₁₀(OH)₄(H₂O)₈] ( 1′ ). Bulk characterization of the clusters has been carried out by single crystal X‐ray structure analysis, ICP‐MS, TGA, ESI‐MS, CV and SQUID‐magnetometer analysis. X‐ray analysis revealed that 1′ has eight positions within the central Keggin core that were disordered W/Mn whereas 1 contained no such disorder. This subtle difference is due to a differences is how the two clusters assemble and recrystallize from the same mother liquor and represents a new type of isomerism. The rapid recrystallization process was captured via digital microscopy and this uncovered two “intermediate” types of crystal which formed temporarily and provided nucleation sites for the final clusters to assemble. The intermediates were investigated by single crystal X‐ray analysis and revealed to be novel clusters K₄Li₂₂[W₃₆Si₄Mn₇O₁₃₆(H₂O)₈]?56 H₂O ( 2 ) and Mn₂K₈Li₁₄[W₃₆Si₄Mn₇O₁₃₆(H₂O)₈]?45 H₂O ( 3 ). The intermediate clusters contained different yet related building blocks to the final clusters which allowed for the postulation of a mechanism of assembly. This demonstrates a rare example where the use X‐ray crystallography directly facilitated understanding the means by which a POM assembled.     

New Acyclic Neutral Phosphorus Sulfides and Sulfide Oxides

A great number of binary neutral phosphorus sulfides was discovered and investigated. However all stable representatives of this family of compounds adopt a polycyclic structure in contrast to their lighter homologues, the nitrogen oxides. Acyclic representatives can be stabilized by adduct formation with a nitrogen base. The bis(pyridine) adduct py₂P₂S₅ of the unstable acyclic phosphorus sulfide P₂S₅ is readily obtained stirring P₄S₁₀ in pyridine at ambient temperature. X‐ray diffraction studies on single crystals of py₂P₂S₅ · 0.5 py ( 1b ) show a N₂O₅ like structure for the P₂S₅ framework. The long P–N distances of 1.86 Å indicate only weak coordination of the pyridine molecules to phosphorus. Single crystal X‐ray diffraction studies on py₂P₂S_4.34O_0.66 ( 2 ) reveal the presence of py₂P₂S₄O ( 3 ) together with py₂P₂S₅ in the crystal. Compound 3 contains the mixed phosphorus oxide sulfide molecule P₂S₄O stabilized as bis(pyridine) adduct. It is readily obtained from pyP₂S₅ by oxidation with KMnO₄ in pyridine. The oxygen atom occupies the bridging position between the two phosphorus atoms. Quantum chemical calculations at the MPW1PW91 level of theory as well as DTA/TG thermal analyses confirm the weak coordination of the pyridine molecules in py₂P₂S₅, py₂P₂S₄O, and py₂P₂S₇ to phosphorus.     

Synthesis and Crystal Structures of Novel Copper(I) Clusters with Bridging Silyl Amide Ligands

Treatment of copper(I) chloride with R₂Si(NLiPh)₂ (R = Me, Ph) in thf led to the formation of the octanuclear cluster compounds [Cu₈{(R₂Si(NPh)₂}₄] [R = Me ( 1 ), Ph ( 2 ).] Compound 1 crystallizes in the tetragonal space group P4/n, with a = 1505.41(5) and c = 1911.32(7) pm. The X‐ray crystal structure determination revealed a cube shaped Cu₈ cluster core with μ₄ bridging Me₂Si(NPh)₂^2– ligands. The copper atoms display an almost linear coordination with Cu–N distances in the range of 191.1(3)–191.4(3) pm. The Cu–Cu distances are 265.7(1)–267.3(1) pm. Compound 2 forms monoclinic crystals, space group P2₁/n, with a = 1461.87(4), b = 2483.77(6), c = 2725.49(8) pm, β = 100.77(1)°. The cluster core of compound 2 consists formally of two mutually perpendicular arranged trigonal prisms, which share a common square face. Like in the case of compound 1 the square faces of the cluster core are capped by μ₄ bridging Ph₂Si(NPh)₂^2– ligands. The copper atoms adopt a nearly linear N–Cu–N coordination with Cu–N distances of 190.0(4)–195.1(4) pm. The Cu–Cu distances are 252.3(1)–305.6(1) pm.     

Identification of lipophilic bioproduct portfolio from bioreactor samples of extreme halophilic archaea with HPLC-MS/MS

Extreme halophilic archaea are a yet unexploited source of natural carotenoids. At elevated salinities, however, material corrosivity issues occur and the performance of analytical methods is strongly affected. The goal of this study was to develop a method for identification and downstream processing of potentially valuable bioproducts produced by archaea. To circumvent extreme salinities during analysis, a direct sample preparation method was established to selectively extract both the polar and the nonpolar lipid contents of extreme halophiles with hexane, acetone and the mixture of MeOH/MTBE/water, respectively. Halogenated solvents, as used in conventional extraction methods, were omitted because of environmental considerations and potential process scale-up. The HPLC-MS/MS method using atmospheric pressure chemical ionization was developed and tuned with three commercially available C₄₀ carotenoid standards, covering the wide polarity range of natural carotenoids, containing different number of OH-groups. The chromatographic separation was achieved on a C₃₀ RP-HPLC column with a MeOH/MTBE/water gradient. Polar lipids, the geometric isomers of the C₅₀ carotenoid bacterioruberin, and vitamin MK-8 were the most valuable products found in bioreactor samples. In contrast to literature on shake flask cultivations, no anhydrous analogues of bacterioruberin, as by-products of the carotenoid biosynthesis, were detected in bioreactor samples. This study demonstrates the importance of sample preparation and the applicability of HPLC-MS/MS methods on real samples from extreme halophilic strains. Furthermore, from a biotechnological point-of-view, this study would like to reveal the relevance of using controlled and defined bioreactor cultivations instead of shake flask cultures in the early stage of potential bioproduct profiling.     

Towards a receptor-free immobilization and SERS detection of urinary tract infections causative pathogens

Based on molecular-specific surface-enhanced Raman scattering (SERS) spectroscopy we were able to discriminate between rough and smooth strains of Escherichia coli and Proteus mirabilis bacteria. For this purpose, bacteria have been immobilized through electrostatic forces by inducing a positive charge on the glass slide. This way, SERS spectra on bacterial biomass and also on single bacteria could be recorded in less than 2 h, by using concentrated silver nanoparticles as SERS-active substrate. Single-bacterium SERS spectral fingerprints showed to be sensitive to the presence of the O-antigen at strain level and to the microorganisms growth phase. By using principal component analysis (PCA) on the SERS spectra recorded from E. coli and P. mirabilis, these two uropathogens could be fairly discriminated.     

Magnetic Resonance Access to Transiently Formed Protein Complexes

Protein–protein interactions are of utmost importance to an understanding of biological phenomena since non-covalent and therefore reversible couplings between basic proteins leads to the formation of complex regulatory and adaptive molecular systems. Such systems are capable of maintaining their integrity and respond to external stimuli, processes intimately related to living organisms. These interactions, however, span a wide range of dissociation constants, from sub-nanomolar affinities in tight complexes to high-micromolar or even millimolar affinities in weak, transiently formed protein complexes. Herein, we demonstrate how novel NMR and EPR techniques can be used for the characterization of weak protein–protein (ligand) complexes. Applications to intrinsically disordered proteins and transiently formed protein complexes illustrate the potential of these novel techniques to study hitherto unobserved (and unobservable) higher-order structures of proteins.