Measuring intracellular calcium fluxes in high throughput mode

The measurement of intracellular calcium fluxes in real time is widely applied within the pharmaceutical industry to measure the activation of G-protein coupled receptors (GPCRhyp;s), either for pharmacological characterisation or to screen for new surrogate ligands. Initially restricted to G(q) coupled GPCRs, the introduction of promiscuous and chimeric G-proteins has further widened the application of these assays. The development of new calcium sensitive dyes and assays has provided sensitive, homogeneous assays which can be readily applied to high throughput screening (HTS). In this paper we describe the full automation of this assay type using a fluorometric imaging plate reader (FLIPR ) integrated into a Beckman/Sagian system to establish a simple robotic system that is well suited for the current medium throughput screening in this area of lead discovery. Using a recently completed HTS we discuss important determinants for FLIPR based screening, highlight some limitations of the current approach, and look at the requirements for future automated systems capable of keeping up with expanding compound files.     

Molecular basis for antifreeze activity difference of two insect antifreeze protein isoforms

The insect spruce budworm(Choristoneura fumiferana) produces antifreeze protein(AFP) to assist in the protection of the over-wintering larval stage and contains multiple isoforms. Structures for two isoforms,known as CfAFP-501 and CfAFP-337,show that both possess similar left-handed β-helical structure,although thermal hysteresis activity of the longer isoform CfAFP-501 is three times that of CfAFP-337. The markedly enhanced activity of CfAFP-501 is not proportional to,and cannot be simply accounted for,by the increased ice-binding site resulting from the two extra coils in CfAFP-501. In or-der to investigate the molecular basis for the activity difference and gain better understanding of AFPs in general,we have employed several different computational methods to systematically study the structural properties and ice interactions of the AFPs and their deletion models. In the context of intact AFPs,a majority of the coils in CfAFP-501 has better ice interaction and causes stronger ice lattice disruption than CfAFP-337,strongly suggesting a cooperative or synergistic effect among β-helical coils. The synergistic effect would play a critical role and make significant contributions to the anti-freeze activity β-helical antifreeze proteins. This is the first time that synergistic effect and its implica-tion for antifreeze activity are reported for β-helical antifreeze proteins.     

Response of poly(vinyl chloride) electrodes based on the neutral carrier 1,4,7,10-tetraoxacyclododecane

Ion-selective electrodes based on the neutral carrier, 12-crown-4, in a poly(vinyl chloride) matrix were found to respond ideally, or almost ideally, to potassium, sodium, barium, strontium, magnesium, cobalt(II), nickel(II) and aluminum ions. The electrode showed good selectivity for Al³⁺ over Co²⁺ and Mg²⁺, and for Co²⁺ over Mg²⁺. Little selectivity was found for the other ions tested.     

Do proficiency tests always verify laboratories’ performance? The case of FAPAS PT 0270

In this paper, the case of FAPAS PT 0270 “Doramectin and Oxfendazole in Sheep Liver” is discussed. During evaluation of the data received from participants (determination of total, oxidised oxfendazole residue and calculation of the sum of oxfendazole and oxfendazole sulfone residues), significant differences were observed between the results obtained by use of two analytical approaches. This phenomenon can be explained by the route of oxfendazole metabolism, which results in the presence of fenbendazole in the sample. This was not predicted by the provider; consequently, not all the necessary tests on the material were conducted. Due to the high uncertainty of the z-scores in this test, the results of the PT cannot be used for purposes of evaluation, and the benefits of participation in PT 0270 are questionable.     

Nanoscale borromeates

[Structure: See text] In addition to a parent zinc(II) Borromean ring (BR) complex, the preparation and characterization of two hexasubstituted BR complexes with either 4-acetoxymethylphenyl or 4-methylthiophenyl substituents associated in turn with all six pyridyl rings has been achieved convergently in good yields by appealing to the dynamic features of the reactions between primary amino groups in a preformed acyclic ligand and 2,6-diformylpyridine. Two molecules of the acyclic ligands react with two molecules of 2,6-diformylpyridine to form a cyclic [2 + 2] tetraimine in the presence of Zn(II) ions as templates in 2-propanol at 70 degrees C. The successful preparation of the two derivatives by convergent template-directed syntheses opens up opportunities to self-assemble, under equilibrium control, numerous nanoscale metallo-organic particles with potentially useful properties.     

Azobridges from azines, XVII. Intra- and intermolecular [3+2] cycloaddition between nonstabilized azomethineimines and alkenes

Azo compounds 1 and 3 containing a CC-double bond in a parallel but distant position are quatemized by Me₃OBF₄ to 1,MeBF₄ and 3,MeBF₄, whereas MeI produces the cage compounds 2,HX and 4,HX. These [3+2] cycloadducts also are quantitatively formed from 1,MeBF₄ and 3,MeBF₄ with catalytic amounts of azo compounds. Intermolecular [3+2] cycloadditions occur with a mixture of DBH (5) or DBO (8), MeI and a variety of alkenes (→ HI) salts of (6, 7, 9 — 12). The intermediate azomethineimines, if stabilized by a fluorenylidene group, can be isolated (20, 22,24), but not, however, in the presence of a close parallel CC-bond (25 → 26).     

A small angle X-ray scattering study of polyethylene fibres,using the two-dimensional correlation function

Summary By Fourier transformation of the intensity distribution in the small angle X-ray scattering diagram of a polymer fibre one obtains the corresponding two-dimensional correlation function. This is compared with correlation functions calculated on the basis of different models of the semi-crystalline morphology. Here, two steps may be distinguished: in the first, the correctness of a model may be checked with the aid of qualitative features, such as the relative positions and sizes of positive and negative areas; in the second a quatitative agreement is pursued by fixing the various parameters involved. This method was applied to cold drawn low density polyethylene before and after annealing at different temperatures. In the case of the non-annealed sample, the microparacrystalline model, discussed byHosemann andLoboda-Cackovic (J. Appl. Cryst.11, 540 (1978)) was found to give the best fit. Annealing at 80 °C or higher temperatures seems to lead to what has been indicated as a three-dimensional chess-board structure; it consists of fibrils in which crystalline and amorphous regions alternate in such a way that the crystalline regions in a fibril are adjacent to amorphous regions in neighbouring fibrils.

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Zusammenfassung Durch Fourier-Transformation der Intensitätsverteilung im Kleinwinkelstreudiagramm von Polymerfasern bekommt man die zugehörige zweidimensionale Korrelationsfunktion. Diese wird verglichen mit Korrelationsfunktionen, die für verschiedene Modelle der teilkristallinen Morphologie berechnet wurden.Hier werden zwei Schritte unterschieden. Im ersten Schritt wird die Richtigkeit eines Modells überprüft mit Hilfe von qualitativen Merkmalen, wie z. B. die relativen Lagen und Größen der positiven und negativen Bereiche. Im zweiten Schritt wird eine quantitative Übereinstimmung dadurch angestrebt, daß die unterschiedlich bezüglichen Parameter festgestellt werden. Diese Methode wurde angewandt bei kaltverstrecktem Polyäthylen niedriger Dichte, sowohl vor wie nach Temperung bei verschiedenen Temperaturen. Im Falle einer nicht getemperten Probe zeigte sich, daß das mikrokristalline Modell, vorgeschlagen von Hosemann und Loboda-Cackovic (J. Appl. Cryst.11, 540 (1978)), am besten zutrifft. Temperung bei 80°C oder bei höheren Temperaturen scheint zu einer Struktur zu führen, die als dreidimensionale Schachbrett-Struktur bezeichnet wurde. Sie besteht aus Fibrillen, in denen kristalline und amorphe Bereiche abwechseln, und zwar so, daß die kristallinen Bereiche in einer Fibrille nur von amorphen Bereichen in nächstliegenden Fibrillen umgeben sind.

     

BINAS - synthesis and use of a new ligand for propylene hydroformylation

BINAS is a new, very efficient ligand for propylene hydroformylation. BINAS is made by the sulfonation of NAPHOS. Different synthetic routes to NAPHOS are discussed. A new two step synthesis starting from 2,2′-bis(bromomethyl)-1,1′-binaphthyl is described.     

Enzymatic hydrogen atom abstraction from polyunsaturated fatty acids

The oxidation of polyunsaturated fatty acids such as arachidonic and linoleic acid initiates a plethora of cell signaling pathways in animals and plants. The chemistry of the enzymatic oxidation has been investigated for several enzymes, most notably prostaglandin synthase and the lipoxygenases, revealing many surprises and impressive examples of enzymatic control of hydrogen atom abstraction and subsequent oxygenation.     

Heterocyclic derivatives of naphthalene-1,8-dicarboxylic anhydride. Part I. Nitro-7H-benzimidazo[2,1-a]benz[de]isoquinolin-7-ones

Condensation of o-phenylenediamine with 2-, 3- and 4-nitronaphthalene-1,8-dicarboxylic anhydrides gives, in each case, an isomer mixture. Separation of the mixtures into the six isomeric mononitro-7H-benzimidazo[2,1-a]benz[de]isoquinolin-7-ones is described and the isomers characterised in respect of previously reported data on some isomers; ir and mass spectrum data are reported, the latter showing fragmentation ions which may be used in characterising dyes based on this chromophore. Other new derivatives of 7H-benzimidazo[2,1-a]benz[de]isoquinolin-7-one are also described.