Novel Tripod Amphiphiles for Membrane Protein Analysis

Integral membrane proteins play central roles in controlling the flow of information and molecules across membranes. Our understanding of membrane protein structures and functions, however, is seriously limited, mainly due to difficulties in handling and analysing these proteins in aqueous solution. The use of a detergent or other amphipathic agents is required to overcome the intrinsic incompatibility between the large lipophilic surfaces displayed by the membrane proteins in their native forms and the polar solvent molecules. Here, we introduce new tripod amphiphiles displaying favourable behaviours toward several membrane protein systems, leading to an enhanced protein solubilisation and stabilisation compared to both conventional detergents and previously described tripod amphiphiles.     

Editorial Board: Electrophoresis 10'14

Electrophoresis 2014, 35, 1504–1508. DOI: 10.1002/elps.201400001 Combination of DNA biobarcode assay with micro‐capillary electrophoretic analysis on a chip allows us to perform breast and colorectal cancer cell detection with high sensitivity, multiplexity, and accuracy.

     

Independent isomeric-yield ratio of 89m,gNb from 93Nb(γ, 4n), natZr(p,xn), and 89Y(α, 4n) reactions

The independent isomeric-yield ratios of ^89m,gNb for the ⁹³Nb(γ, 4n) ^89m,gNb reaction with bremsstrahlung energies of 45-, 50-, 55-, 60-, and 70-MeV were measured by the activation and the off-line γ-ray spectrometric technique at 100 MeV electron linac of the Pohang accelerator laboratory. The isomeric-yield ratios of ^89m,gNb for the ^natZr(p, xn) ^89m,gNb and the ⁸⁹Y(α, 4n) ^89m,gNb reactions were measured by using a stacked-foil activation technique with the proton energies of 19–45 MeV and alpha energies of 38.9-, 40.5-, and 42.5-MeV at the MC-50 cyclotron of Korea Institute of Radiological and Medical Sciences. The measured isomeric-yield ratio of ^89m,gNb from the ⁹³Nb(γ, 4n), ^natZr(p, xn), and ⁸⁹Y(α, 4n) reactions were compared with the similar literature data in the ⁸⁹Y(³He, 3n) reaction. It was found that the isomeric yield ratio of ^89m,gNb increases with projectile energy, which indicate the effect of excitation energy. However, for the similar compound nucleus with the same excitation energy, the isomeric-yield ratios of ^89m,gNb in the ⁸⁹Y(α, 4n) and ⁸⁹Y(³He, 3n) reactions are higher than those in the ⁹³Nb(γ, 4n) and ^natZr(p, xn) reactions, which indicates the role of input angular momentum. The isomeric-yield ratios of ^89m,gNb in the ⁹³Nb(γ, 4n), ^natZr(p, xn), ⁸⁹Y(α, 4n), and ⁸⁹Y(³He, 3n) reactions were also calculated theoretically using computer code TALYS 1.4. The theoretical isomeric-yield ratios of ^89m,gNb from four reactions increase with excitation energy. However, the theoretical value are significantly higher than the experimental data in the ⁹³Nb(γ, 4n) and ^natZr(p, xn) reactions but slightly lower or comparable in the ⁸⁹Y(α, 4n) rand ⁸⁹Y(³He, 3n) reactions.     

Fabrication and physical properties of lanthanide oxide glass wasteform for the immobilization of lanthanide oxide wastes generated from pyrochemical process

The pyrochemical process, which uses a dry method to recycle used nuclear fuel generates waste LiCl–KCl salt containing radioactive lanthanide elements. To reuse LiCl–KCl salt, the lanthanide elements are separated through a precipitation method promoted by oxygen sparging and the separated fission product of lanthanide oxide should be fabricated into durable wasteforms sustainable for several 1,000 years to store in a final geological repository. Herein, we report the fabrication of a borosilicate glass based wasteform with a glass matrix of SiO₂–Al₂O₃–B₂O₃ having a high waste loading of 50 wt% lanthanide oxide. Th physical properties of four kinds of wasteforms having a different lanthanide oxide waste composition were evaluated. To investigate the long-term physical stability of each sample having 50 wt% lanthanide oxide waste loading, time–temperature–transformation (TTT) test was conducted at 500 and 700 °C for 60 and 180 h, and the physical properties were evaluated after each TTT test.     

Using electrospray laser desorption ionization mass spectrometry to rapidly examine the integrity of proteins stored in various solutions

Electrospray laser desorption ionization mass spectrometry (ELDI/MS) allows the rapid desorption and ionization of proteins from solutions under ambient conditions. In this study, we have demonstrated the use of ELDI/MS to efficiently examine the integrity of the proteins stored in various solutions before they were further used for other biochemical tests. The protein standards were prepared in the solutions containing buffers, organic salts, inorganic salts, strong acid, strong base, and organic solvents, respectively, to simulate those collected from solvent extraction, filtration, dialysis, or chromatographic separation. Other than the deposit of a drop of the sample solution on the metallic sample plate in an ELDI source, no additional sample pretreatment is needed. The sample drop was then irradiated with a pulsed laser; this led to desorption of the analyte molecules, which subsequently entered the ESI plume to undergo post-ionization. Because adjustment of the composition of the sample solution is unnecessary, this technique appears to be useful for rapidly evaluating the integrity of proteins after storage or prior to further biochemical treatment. In addition, when using acid-free and low-organic-solvent ESI solutions for ELDI/MS analysis, the native conformations of the proteins in solution could be detected.

An assessment of the liquid–gas partitioning behavior of major wastewater odorants using two comparative experimental approaches: liquid sample-based vaporization vs. impinger-based dynamic headspace extraction into sorbent tubes

The gas–liquid partitioning behavior of major odorants (acetic acid, propionic acid, isobutyric acid, n-butyric acid, i-valeric acid, n-valeric acid, hexanoic acid, phenol, p-cresol, indole, skatole, and toluene (as a reference)) commonly found in microbially digested wastewaters was investigated by two experimental approaches. Firstly, a simple vaporization method was applied to measure the target odorants dissolved in liquid samples with the aid of sorbent tube/thermal desorption/gas chromatography/mass spectrometry. As an alternative method, an impinger-based dynamic headspace sampling method was also explored to measure the partitioning of target odorants between the gas and liquid phases with the same detection system. The relative extraction efficiency (in percent) of the odorants by dynamic headspace sampling was estimated against the calibration results derived by the vaporization method. Finally, the concentrations of the major odorants in real digested wastewater samples were also analyzed using both analytical approaches. Through a parallel application of the two experimental methods, we intended to develop an experimental approach to be able to assess the liquid-to-gas phase partitioning behavior of major odorants in a complex wastewater system. The relative sensitivity of the two methods expressed in terms of response factor ratios (RF_vap/RF_imp) of liquid standard calibration between vaporization and impinger-based calibrations varied widely from 981 (skatole) to 6,022 (acetic acid). Comparison of this relative sensitivity thus highlights the rather low extraction efficiency of the highly soluble and more acidic odorants from wastewater samples in dynamic headspace sampling.     

Investigation of Rotating Arc-Catalytic Reactor for CF4 Removal with High Energy Efficiency

Plasma Chemistry and Plasma Processing - CF4 is commonly used in semiconductor industries, and its removal requires a large amount of energy because it is a highly stable perfluorinated compound....     

Substituent Effects on the Vibrational Properties of the CN Stretch Mode of Aromatic Nitriles: IR Probes Useful for Time-resolved IR Spectroscopy

Developing ideal IR probes is essential to understand the structure and dynamics of biomolecules with time-resolved IR spectroscopies and imaging techniques. Especially, nitrile (CN) group has recently been proposed to serve as IR probes of the local environment of proteins. Herein, we investigated the effect of a substituent on the vibrational properties of the benzonitrile. The electron-donating and withdrawing character of p-substituent on benzonitrile are expected to modulate the vibrational frequency, molar extinction coefficient, and vibrational lifetime of CN probe. FT-IR revealed the positive correlation between electron-donating character and the molar extinction coefficient of CN stretch mode. Infrared pump-probe (IR-PP) measurements showed that the vibrational lifetime of CN stretch mode exhibits a relatively weak correlation with the electron-donating strength. Among the investigated samples, 4-dimethylamino benzonitrile with the strongest electron-donating strength shows enhanced absorption and extended vibrational lifetime. Utilizing substituent effects will be a practical strategy to improve the performance of the IR probe.