Cluster beams from passivated nanocrystals

Stable, intense beams of large metal clusters (from 10² to 10³ Au or Ag atoms) can be produced by laser desorption of molecular films of passivated nanocrystals that have undergone fractionation by size and a separate structural characterization. The mass onset of the desorbed species corresponds directly to the dimensions of the nanocrystal core, indicating that only the surfactant shell is lost during desorption. Photofragmentation, photoionization, and photodetachment from beams of large metal clusters, generated in this way, have all been observed.     

High-speed gradient parallel liquid chromatography/tandem mass spectrometry with fully automated sample preparation for bioanalysis: 30 seconds per sample from plasma

In this work, a high-throughput and high-performance bioanalytical system is described that is capable of extracting and analyzing 1152 plasma samples within 10 hours. A Zymark track robot system interfaced with a Tecan Genesis liquid handler was used for simultaneous solid-phase extraction of four 96-well plates in a fully automated fashion. The extracted plasma samples were injected onto four parallel monolithic columns for separation via a four-injector autosampler. The use of monolithic columns allowed for fast and well-resolved separations at a considerably higher flow rate without generating significant column backpressure. This resulted in a total chromatographic run cycle time of 2 min on each 4.6 x 100 mm column using gradient elution. The effluent from the four columns was directed to a triple quadrupole mass spectrometer equipped with an indexed four-probe electrospray ionization source (Micromass MUX interface). Hence, sample extraction, separation, and detection were all performed in a four-channel parallel format that resulted in an overall throughput of about 30 s per sample from plasma. The performance of this system was evaluated by extracting and by analyzing twelve 96-well plates (1152) of human plasma samples spiked with oxazepam at different concentrations. The relative standard deviation (RSD) of analyte sensitivity (slope of calibration curve) across the four channels and across the 12 plates was 5.2 and 6.8%, respectively. An average extraction recovery of 77.6% with a RSD of 7.7% and an average matrix effect of 0.95 with a RSD of 5.2% were achieved using these generic extraction and separation conditions. The good separation efficiency provided by this system allowed for rapid method development of an assay quantifying the drug candidate and its close structural analog metabolite. The method was cross-validated with a conventional liquid chromatography/tandem mass spectrometry (LC/MS/MS) assay.     

Cationic copolymerization of tetrahydrofuran with propylene oxide. IV. Use of antimony pentachloride as catalyst

Propylene oxide and tetrahydrofuran were polymerized cationically by an in situ catalytic system composed of antimony pentachloride and 1,2-propanediol. The rates of polymerization were measured by vapor-phase chromatography in the temperature range from ?20°C to +20°C. The Arrhenius parameters pertaining to the reaction of each of the comonomers were evaluated and compared with data published earlier for other catalytic systems. The present catalyst system was incapable of initiating a homo-polymerization of tetrahydrofuran in the absence of propylene oxide, while the latter was readily homopolymerized. In a copolymerization system, the rates of consumption of both monomers were first-order in respect to the catalyst, but the reaction ceased when all of the propylene oxide had been consumed. The relative reactivity of the two monomers as characterized by the copolymerization parameters r₁ (PO) = 1.15 and r₂ (THF) = 0.70 suggests that in the copolymerization system, tetrahydrofuran is capable of a reaction with its own active center. This is discussed in terms of a possible mechanism involving the effects of penultimate units and extensive chain transfer. The latter is well evident from the molecular weights of resulting copolyethers, which do not exceed one thousand.     

Predictive models to describe VLE in ternary mixtures water + ethanol + congener for wine distillation

The modeling of liquid–vapor equilibrium in ternary mixtures that include substances found in alcoholic distillation processes of wine and musts is analyzed. In particular, vapor–liquid equilibrium in ternary mixtures containing water + ethanol + cogener has been modeled using parameters obtained from binary mixture data only. The congeners are substances that although present in very low concentrations, of the order of part per million, 10⁻⁶ to 10⁻⁴ mg/L, are important enological parameters [1] and [2]. In this work two predictive models, the PSRK equation of state and the UNIFAC liquid phase model and two semipredictive activity coefficient models: NRTL and UNIQUAC have been used. The results given by these different models have been compared with literature data and conclusions about the accuracy of the models studied are drawn, recommending the best models for correlating and predicting the phase equilibrium in this type of mixtures.     

From clusters to ionic complexes: structurally characterized thallium titanium double alkoxides

A series of sterically varied titanium alkoxides [[Ti(OR)(4)](n)(), n = 4, OR = OCH(2)CH(3) (OEt); n = 1, OCH(CH(3))(2) (OPr(i)); n = 2, OCH(2)C(CH(3))(3) (ONep); n = 1, OC(6)H(3)(CH(3))(2)-2,6 (DMP)] were reacted with a series of thallium alkoxides [[Tl(OR)](x) (x = 4, OR = OEt, ONep; n = infinity, DMP)]. The resultant products of the [Tl(mu(3)-OEt)](4)-modified [Ti(OR)(4)](n)() (OR = OEt, OPr(i), ONep) were found by X-ray analysis to be Tl(4)Ti(2)(mu-O)(mu(3)-OEt)(8)(OEt)(2) (1), Tl(4)Ti(2)(mu-O)(mu(3)-OPr(i))(5)(mu(3)-OEt)(3)(OEt)(2) (2), and TlTi(2)(mu(3)-OEt)(2)(mu-OEt)(mu-ONep)(2)(ONep)(4) (3), respectively. The reaction of [Tl(mu(3)-OEt)](4), 12HOEt, and 4[Ti(mu-ONep)ONep)(3)](2) to generate 3 in a higher yield resulted in the isolation of TlTi(2)(mu(3)-OEt)(mu(3)-ONep)(mu-OEt)(mu-ONep)(2)(ONep)(4) (4). Compounds 1 and 2 possess an octahedral (Oh) arrangement of two Ti and four Tl metal atoms around a mu-O central oxide atom (the Tl-O distance is too long to be considered a bond). For both compounds, each Ti atom adopts a distorted Oh geometry with one terminal OEt ligand. The Tl atoms are formally 4-coordinated, adopting a distorted pyramidal geometry using four mu(3)-OR (OR = OEt or OPr(i)) ligands to complete their coordination sphere. The Tl atoms reside approximately 1.4 A below the basal plane of oxygens. In contrast to these structures, both 3 and 4 utilize ONep ligands and display reduced oligomerization yielding trinuclear complexes without oxo formation. The two Ti cations are Oh, and the single Tl cation is in a formal distorted pyramidal (PYD) arrangement. If the lone pair of the Tl cations are considered in the geometry, each Tl adopts a square base pyramidal geometry. Two terminal ONep ligands are bound to each Ti with the remainder of the molecule consisting of mu(3)- and mu-ONep ligands. The reaction of [Tl(mu(3)-ONep)](4) with two equivalents of [Ti(mu-ONep)(ONep)(3)](2) also led to the isolation of the homoleptic trinuclear complex TlTi(2)(mu(3)-ONep)(2)(mu-ONep)(3)(ONep)(4) (5) which is analogous in structure to the mixed ligand species of 3 and 4. Each Ti is Oh coordinated with six ONep ligands, and the single Tl is PYD bound by ONep ligands. A further increase in the steric bulk of the pendant ligands, using [Tl(mu-DMP)](infinity) and [Ti(mu-ONep)(ONep)(3)](2), resulted in a further decrease in the nuclearity yielding the dinuclear species TlTi(mu-DMP)(mu-ONep)(DMP)(ONep)(2) (6). For 6, the two metals are bound by a mu-ONep and a mu-DMP ligand. The Tl metal center was solved in a bent geometry while the Ti adopted a distorted trigonal bipyramidal (TBP) geometry using three ONep and two DMP ligands to fill its coordination sphere. Further increasing the steric bulk of the ancillary ligands using Ti(DMP)(4) and [Tl(mu-DMP)](infinity) led to the formation of [Tl(+)][(-)(eta(2-3)-DMP)Ti(DMP)(4)] (7). The Ti metal center is in a TBP geometry, and the "naked" Tl cation resides unencumbered by solvent molecules but was found to have a strong pi-interaction with four DMP ligands of neighboring Ti(DMP)(5)(-) anions. For this novel set of compounds, (205)Tl NMR spectroscopy was used to investigate the solution behavior of these compounds. Multiple (205)Tl resonances were observed for the solution spectra of the crystalline material of 1-6, and a broad singlet was observed for 7. The large number of minor resonances noted for these compounds was attributed to sensitivity of the Tl cation based on small variations due to ligand rearrangement. However, the major resonance noted in the (205)Tl NMR solution spectra of 1-7 are in agreement with their respective solid-state structures.     

Partial-filling affinity capillary electrophoresis

Partial-filling affinity capillary electrophoresis (PFACE) is used to examine the binding interactions between two model biological systems: D-Ala-D-Ala terminus peptides to the glycopeptide antibiotic vancomycin (Van) from Streptomyces orientalis, and arylsulfonamides to carbonic anhydrase B (CAB, EC 4.2.1.1, bovine erythrocytes). Using these two systems, modifications in the PFACE technique are demonstrated including flow-through PFACE (FTPFACE), competitive flow-through PFACE (CFTPFACE), on-column ligand synthesis PFACE (OCLSPFACE), and multiple-step ligand injection PFACE (MSLIPFACE). In PFACE small plugs of sample are injected into the capillary column and an equilibrium is established between receptor and ligand during electrophoresis. Binding constants are then obtained by Scatchard analysis using changes in the migration time of the receptor/ligand on changing the concentration of the ligand/receptor. Data demonstrating the quantitative potential of these methods are presented. This review focuses on the unique capabilities of the different PFACE techniques as applied to two model biological systems.     

1,3-Dichloro-2-butene: a useful precursor for the 2-butene-1,3-dianion and its corresponding 1,3-dipolar synthon

The reaction of 1,3-dicloro-2-butene (1; 5:1 Z:E-mixture) with lithium powder and a catalytic amount of 4,4′-di-tert-butylbiphenyl (DTBB, 1% molar) in the presence of different electrophiles [EtCHO, PrⁱCHO, Bu^tCHO, c-C₆H₁₁CHO, Me₂CO, Et₂CO, (CH₂)₄CO, (CH₂)₅CO, (c-C₃H₅)₂CO, Me₃SiCl] in THF at temperatures ranging between −78 and −50°C gives, after hydrolysis with water, the corresponding products 2 in different Z:E-ratios depending on the electrophile used. Treatment of some diols 2 with hydrochloric acid gives dienic alcohols 3 or substituted dihydropyrans 4, depending on the structure of the starting diol. Finally, the same dichlorinated starting material is transformed into the corresponding allylic amines derived from morpholine and benzyl methyl amine and submitted to the same DTBB-catalysed lithiation as above, so after reaction with different electrophiles [Bu^tCHO, c-C₆H₁₁CHO, Me₂CO, Et₂CO, (CH₂)₄CO, (CH₂)₅CO, Me₃SiCl] and final hydrolysis with water, compounds 7 are isolated having a Z-configuration. A mechanistic explanation for this behaviour is given.     

Affinity capillary electrophoresis study of the linkage existing between proton and zinc ion binding to bacitracin A1

Measurements by capillary electrophoresis (CE) of bacitracin A(1) effective mobility at different pH values permitted to estimate the five acidic dissociation constants and the Stokes radii at different protonation stages of the macrocyclic dodecapeptide. The pK(a) values were 3.6 and 4.4 for the two carboxylic groups of the lateral chains of D-Asp-11 and D-Glu-4, respectively, 6.4 for the aza-atom of the imidazole ring of His-10, 7.6 for the amino group of N-terminal Ile-1 and 9.7 for the delta-amino group of D-Orn-7, very close to the values obtained by other researchers by titration experiments. In agreement with a rigid macrocyclic structure the Stokes radii of different protonated forms ranged only between 14.3 and 14.8 A. Best fitting procedures performed on experimental mobility measured at two different pH values (5.50 and 6.72) in the presence of increasing Zn(+2) concentration allowed confirming the model that assumes the binding of Zn(+2) to P(0) peptide form with a 1.5 x 10(3) M(-1) intrinsic association constant. Following to Zn(+2) binding, the pK(a) of the amino group of N-terminal Ile-1 is shifted from 7.6 to 5.9 and the Stokes radius is reduced of about 3 A. The mean charge of the bacitracin A(1)-Zn(+2) complex resulted +1.67 and +1.12 at pH 5.50 and 6.72, respectively. These results suggest that the amino group of N-terminal Ile-1 is not essential for Zn(+2) binding.     

Rapid estmation of technetium in99Mo−99mTc generators

A nomogram is presented to estimate the radiooctivity of^99mTc in⁹⁹Mo−^99mTc generators, based on equations of radioactive equilibrium. Since the parent element decays through two isomeric states of the daughter, the ratio of the total mass of technetium per millicurie of^99mTc is a function of the time elapsed between two consecutive elutions. Values of the amount of^99mTc expressed as a mole fraction or in moles or grams of total technetium per millicurie of^99mTc^m are also presented.     

Glycan–protein cross-linking mass spectrometry reveals sialic acid-mediated protein networks on cell surfaces

A cross-linking method is developed to elucidate glycan-mediated interactions between membrane proteins through sialic acids. The method provides information on previously unknown extensive glycomic interactions on cell membranes. The vast majority of membrane proteins are glycosylated with complicated glycan structures attached to the polypeptide backbone. Glycan–protein interactions are fundamental elements in many cellular events. Although significant advances have been made to identify protein–protein interactions in living cells, only modest advances have been made on glycan–protein interactions. Mechanistic elucidation of glycan–protein interactions has thus far remained elusive. Therefore, we developed a cross-linking mass spectrometry (XL-MS) workflow to directly identify glycan–protein interactions on the cell membrane using liquid chromatography-mass spectrometry (LC-MS). This method involved incorporating azido groups on cell surface glycans through biosynthetic pathways, followed by treatment of cell cultures with a synthesized reagent, N-hydroxysuccinimide (NHS)–cyclooctyne, which allowed the cross-linking of the sialic acid azides on glycans with primary amines on polypeptide backbones. The coupled peptide–glycan–peptide pairs after cross-linking were identified using the latest techniques in glycoproteomic and glycomic analyses and bioinformatics software. With this approach, information on the site of glycosylation, the glycoform, the source protein, and the target protein of the cross-linked pair were obtained. Glycoprotein–protein interactions involving unique glycoforms on the PNT2 cell surface were identified using the optimized and validated method. We built the GPX network of the PNT2 cell line and further investigated the biological roles of different glycan structures within protein complexes. Furthermore, we were able to build glycoprotein–protein complex models for previously unexplored interactions. The method will advance our future understanding of the roles of glycans in protein complexes on the cell surface.

The cell surface glycocalyx is highly interactive defined by extensive covalent and non-covalent interactions. A method for cross-linking and characterizing glycan–peptide interactions in situ is developed.