Chemical bonding topology of ternary transition metal-centered bismuth cluster halides: from molecules to metals

The bismuth polyhedra in ternary transition metal-centered bismuth cluster halides may form discrete molecules or ions, infinite chains, and/or infinite layers. The chemical bonding in many of these diverse structures is related to that in deltahedral boranes exhibiting three-dimensional aromaticity by replacing the multicenter core bond in the boranes with two-center two-electron (2c-2e) bonds from the central transition metal to the nearest neighbor bismuth vertices. Examples of discrete molecules or ions include octahedral MBi(6)(micro-X)(12)(z)()(-) (X = Br, I; M = Rh, Ir, z = 3; M = Ru, z = 4) with exclusively 2c-2e bonds and pentagonal bipyramidal RhBi(7)Br(8) with a 5c-4e bond in the equatorial pentagonal plane indicative of M?bius aromaticity. The compound Ru(3)Bi(24)Br(20) contains a more complicated discrete bismuth cluster ion Ru(2)Bi(17)(micro-Br)(4)(5+), which can be dissected into a RuBi(5) closo octahedron and a RuBi(8) nido capped square antiprism bridged by a Ru(2)Bi(4)(micro-Br)(4) structural unit. In RuBi(4)X(2) (X = Br, I), the same Ru(2)Bi(4)(micro-Br)(4) structural unit bridges Bi(4) squares similar to those found in the known Zintl ion Bi(4)(2)(-) to give infinite chains of Ru(2)Bi(4) octahedra. The electron counts of the RuBi(5), RuBi(8), and Ru(2)Bi(4) polyhedra in these structures follow the Wade-Mingos rules. A different infinite chain structure is constructed from fused RhBi(7/2)Bi bicapped trigonal prisms in Rh(2)Bi(9)Br(3). This Rh(2)Bi(9)Br(3) structure can alternatively be derived from alternating Rh(2/2)Bi(4) octahedra and Rh(2/)(2)Bi(5) pentagonal bipyramids with electron counts obeying the Wade-Mingos rules. Related chemical bonding principles appear to apply to more complicated layer structures such as Pt(3)Bi(13)I(7) containing Kagomé nets of PtBi(8/2) cubes and Ni(4)Bi(12)X(3) containing linked chains of NiBi(6/3)Bi capped trigonal prisms.     

Arsenic Speciation in As(III)- and As(V)-Treated Soil Using XANES Spectroscopy

Arsenic (As) is a toxic trace element that occurs naturally in groundwater and soils. Understanding the reactions of arsenite (As(III)) and arsenate (As(V)) with soil and mineral surfaces is critical for predicting the fate and transport of As in the environment and developing better ways to remediate As-contaminated areas. This investigation uses X-ray absorption near edge spectroscopy (XANES) to evaluate the solid phase oxidation state and mineral surface binding sites in three agricultural soil samples from California, USA by fitting linear combinations of XANES spectra derived from several synthetic and well characterized As(III)- and As(V)-treated model compounds (Fe and Al metal hydroxides and aluminosilicate illite clay mineral). The results suggest that As(III) is either partially or completely oxidized to As(V) when reacted with soil in an aqueous, batch reaction. The As(III)-treated Aiken soil was composed of 60% As(III) attached to surfaces similar to lepidocrocite (γ-FeOOH)) and 40% As(V) attached to aluminosilicate (illite). The Fallbrook soil completely oxidized As(III) and the product was As(V) adsorbed on Al hydroxide (gibbsite, γ-Al(OH)₃) (62%), illite (16%), and lepidocrocite (γ-FeOOH) (22%). The reaction of As(III) with Wyo soil resulted in 42% As(III) adsorbed on surface similar to goethite and 58% As(V) adsorbed on lepidocrocite. Arsenic(V) adsorption on soil resulted in stable As(V) surface complexes that were well described by XANES spectra from As(V) adsorption complexes on gibbsite, illite, and lepidocrocite.     

Solution redox chemistry of carbon nanotubes

UV/vis/NIR absorbance spectra were used to monitor electron transfer between small-molecule redox reagents and carbon nanotubes (CNTs). The oxidation of (6, 5)-enriched nanotubes in water with K(2)Ir(Cl)(6) reveals a valence electron density of 0.2-0.4 e(-)/100 carbon atoms and a reduction potential of approximately 800 mV versus NHE. The reduction potential of CNTs is found to increase with increasing band gap and to decrease with the introduction of an anionic dispersant. In light of this newly revealed redox chemistry of CNTs, we propose that the previously observed bleaching of the CNT absorbance spectrum at low pH is most likely a consequence of the oxidation of the nanotubes by oxygen. These results demonstrate facile oxidation and reduction of CNTs, provide a way to quantify the population of valence electrons, and point to possible applications of CNT in the catalysis of redox reactions.     

Obtusin,a unique bromine-containing polycyclic ketal from the red marine alga Laurenciaobtusa

The structure of a unique bromine-containing ketal, obtusin ($\text{1}$), has been determined by spectral and X-ray crystallographic techniques. Obtusin is a natural component of the Mediteranean red alga $\text{Laurencia}$$\text{obtusa}$.     

Gel electrophoresis as a means of detecting ternary complex formation of thymidylate synthetase

Polyacrylamide gel electrophoresis was used to resolve as many as three protein components from incubation mixtures containing the inhibitor, 5-fluoro-2′-deoxyuridylate, the cofactor, 5,10-methylene tetrahydrofolate, and thymidylate synthetase. In a series of mixtures containing excess 5,10-methylenetetrahydrofolate and constant levels of thymidylate synthetase, the relative amounts of the protein components were shown to be dependent on the concentration of the inhibitor. Evidence is presented which suggests that the three protein components correspond to (1) native enzyme, (2) an inhibitor-cofactor-enzyme complex in a 1:1:1 molar ratio, and (3) an inhibitorcofactorenzyme complex in a 2:2:1 molar ratio, respectively. Ternary complexes of thymidylate synthetase are stable to gel filtration and are shown to undergo a relatively slow rate of breakdown on storage at 25 °C.     

The stereochemistry of guggulsterol-1

The steroechemistry of guggulsterol-1, a component of the exudate of $\text{Commiphora}$$\text{mukul}$, is shown to be 20(R), 22(R)($\text{3}$).     

Chiral conflict. The effect of temperature on the helical sense of a polymer controlled by the competition between structurally different enantiomers: from dilute solution to the lyotropic liquid crystal state

Helical polymers appended with paired structurally different enantiomers, which have opposing helical sense preferences, yield a new kind of relationship between optical activity and temperature, and also reveal unusual details of the nature of chiral interactions. Consistent with a statistical physical theory developed for these experiments, the proportion of the competing chiral groups, determined by synthesis, fixes the compensation temperature at which the helical senses are equally populated. The lyotropic liquid crystal state formed by these polymers yields therefore a nematic state at any chosen temperature over a very wide range, with a cholesteric state arising with tightening pitch as temperature deviates from this point. Far from the nematic temperature, the pitch reaches the nanometer scale and therefore the reflection of visible light. Before crossing zero at the nematic temperature, the optical activity becomes so large that it may be observed with the unaided eye through crossed polarizers.     

Esters of 5-carboxyl-5-methyl-1-pyrroline N-oxide: a family of spin traps for superoxide

Apparent rate constants, at acidic pH and neutral pH for the reaction of a family of ester-containing 5-carboxyl-5-methyl-1-pyrroline N-oxides with superoxide (O2*-) were estimated, using ferricytochrome c as a competitive inhibitor. It was of interest to note that the rate constants were similar among the different nitrones and not that significantly different from that found for 5-(diethoxyphosphoryl)-5-dimethyl-1-pyrroline N-oxide. At acidic pH, the rate constant for spin trapping O2*- was 3-fold greater than that at physiological pH. Subsequent experiments determined the half-life of aminoxyls, derived from the reaction of these nitrones with O2*-. The EPR spectra were modeled by using a global analysis method. The results clearly demonstrated that EPR spectra of all the aminoxyls were inconsistent with a model that included a single gamma-hydrogen splitting. A better interpretation modeled them as two diastereomers with identical nitrogen splittings and slightly different beta-hydrogen splittings. Detailed line width analyses slightly favored an equal line width-unequal population ratio for the two diastereomers.     

Well-defined, organic nanoenvironments in water: the hydrophobic effect drives a capsular assembly

The synthesis of a water-soluble, deep-cavity cavitand is reported. A blend of molecular curvature and amphiphilicity, this molecule has a hydrophobic concave surface and a hydrophilic convex surface. As a result, in aqueous solution and in the presence of a guest molecule, the host self-assembles to form a capsular assembly with an interior cavity large enough to entrap steroidal guests.