Raman spectra and simulation of cis‐ and trans‐cyclooctene for conformational analysis compared to inelastic neutron scattering

Simulated and measured Raman spectra are used to determine the molecular conformation of trans ‐cyclooctene. This is the first reported Raman spectrum of this highly strained species. A crown structure results in a computed Raman spectrum, which is in good agreement with the experiment; a chair structure does not. Comparison is made with the case of cis ‐cyclooctene. The computed structure and limitations of the method of conformational analysis are discussed. In particular, the relative merits of Raman spectroscopy in comparison with infrared and inelastic neutron scattering (INS) are evaluated using computed spectra for all three methods and comparison of the observed INS for cis ‐cyclooctene with that computed for two conformations. It is concluded that the combination of computed and observed Raman spectra provides a useful method for conformational analysis for cases of this type. Copyright © 2010 John Wiley & Sons, Ltd.     

Parallel-plate RF resonator imaging of chemical shift resolved capillary flow

Magnetic resonance imaging has been introduced to study flow in microchannels using pure phase spatial encoding with a microfabricated parallel-plate nuclear magnetic resonance (NMR) probe. The NMR probe and pure phase spatial encoding enhance the sensitivity and resolution of the measurement. In this paper, ¹H NMR spectra and images were acquired at 100 MHz. The B₁ magnetic field is homogeneous and the signal-to-noise ratio of 30 μl doped water for a single scan is 8×10⁴. The high sensitivity of the probe enables velocity mapping of the fluids in the micro-channel with a spatial resolution of 13×13 μm. The parallel-plate probe with pure phase encoding permits the acquisition of NMR spectra; therefore, chemical shift resolved velocity mapping was also undertaken. Results are presented which show separate velocity maps for water and methanol flowing through a straight circular micro-channel. Finally, future performance of these techniques for the study of microfluidics is extrapolated and discussed.     

Symmetry‐Guided Design and Fluorous Synthesis of a Stable and Rapidly Excreted Imaging Tracer for 19F MRI

Getting FIT : A bispherical ¹⁹F imaging tracer, ¹⁹FIT, was designed and synthesized. ¹⁹FIT is advantageous over perfluorocarbon‐based ¹⁹F imaging agents, as it is not retained in the organs and does not require complex formulation procedures. Imaging agents such as ¹⁹FIT can lead to ¹⁹F magnetic resonance imaging (MRI) playing an important role in drug therapy, analogous to the role played by ¹H MRI in disease diagnosis.

     

Methyl β‐allolactoside [methyl β‐d‐galactopyranosyl‐(1→6)‐β‐d‐glucopyranoside] monohydrate

Methyl β‐allolactoside [methyl β‐d ‐galactopyranosyl‐(1→6)‐β‐d ‐glucopyranoside], (II), was crystallized from water as a monohydrate, C₁₃H₂₄O₁₁·H₂O. The βGalp and βGlcp residues in (II) assume distorted ⁴C₁ chair conformations, with the former more distorted than the latter. Linkage conformation is characterized by ϕ′ (C2_Gal—C1_Gal—O1_Gal—C6_Glc), ψ′ (C1_Gal—O1_Gal—C6_Glc—C5_Glc) and ω (C4_Glc—C5_Glc—C6_Glc—O1_Gal) torsion angles of 172.9 (2), −117.9 (3) and −176.2 (2)°, respectively. The ψ′ and ω values differ significantly from those found in the crystal structure of β‐gentiobiose, (III) [Rohrer et al. (1980). Acta Cryst. B 36 , 650–654]. Structural comparisons of (II) with related disaccharides bound to a mutant β‐galactosidase reveal significant differences in hydroxymethyl conformation and in the degree of ring distortion of the βGlcp residue. Structural comparisons of (II) with a DFT‐optimized structure, (II_C), suggest a link between hydrogen bonding, pyranosyl ring deformation and linkage conformation.     

Highly parity linked graphs

A graph G is k-linked if G has at least 2k vertices, and for any 2k vertices x ₁,x ₂, …, x _k ,y ₁,y ₂, …, y _k , G contains k pairwise disjoint paths P ₁, …, P _k such that P _i joins x _i and y _i for i = 1,2, …, k. We say that G is parity-k-linked if G is k-linked and, in addition, the paths P ₁, …, P _k can be chosen such that the parities of their length are prescribed. Thomassen [22] was the first to prove the existence of a function f(k) such that every f(k)-connected graph is parity-k-linked if the deletion of any 4k-3 vertices leaves a nonbipartite graph. In this paper, we will show that the above statement is still valid for 50k-connected graphs. This is the first result that connectivity which is a linear function of k guarantees the Erdős-Pósa type result for parity-k-linked graphs. Research partly supported by the Japan Society for the Promotion of Science for Young Scientists, by Japan Society for the Promotion of Science, Grant-in-Aid for Scientific Research and by Inoue Research Award for Young Scientists.     

An Andô-Douglas type theorem in Riesz spaces with a conditional expectation

In this paper we formulate and prove analogues of the Hahn-Jordan decomposition and an Andô-Douglas-Radon-Nikodým theorem in Dedekind complete Riesz spaces with a weak order unit, in the presence of a Riesz space conditional expectation operator. As a consequence we can characterize those subspaces of the Riesz space which are ranges of conditional expectation operators commuting with the given conditional expectation operators and which have a larger range space. This provides the first step towards a formulation of Markov processes on Riesz spaces.     

Interaction forces measured using AFM between colloids and surfaces coated with both dextran and protein

Both proteins and polysaccharides are biopolymers present on a bacterial surface that can simultaneously affect bacterial adhesion. To better understand how the combined presence of proteins and polysaccharides might influence bacterial attachment, adhesion forces were examined using atomic force microscopy (AFM) between colloids (COOH- or protein-coated) and polymer-coated surfaces (BSA, lysozyme, dextran, BSA+dextran and lysozyme+dextran) as a function of residence time and ionic strength. Protein and dextran were competitively covalently bonded onto glass surfaces, forming a coating that was 22-33% protein and 68-77% dextran. Topographic and phase images of polymer-coated surfaces obtained with tapping mode AFM indicated that proteins at short residence times (<1 s) were shielded by dextran. Adhesion forces measured between colloid and polymer-coated surfaces at short residence times increased in the order protein+dextran < or = protein < dextran. However, the adhesion forces for protein+dextran-coated surface substantially increased with longer residence times, producing the largest adhesion forces between polymer coated surfaces and the colloid over the longest residence times (50-100 s). It was speculated that with longer interaction times the proteins extended out from beneath the dextran and interacted with the colloid, leading to a molecular rearrangement that increased the overall adhesion force. These results show the importance of examining the effect of the combined adhesion force with two different types of biopolymers present and how the time of interaction affects the magnitude of the force obtained with two-polymer-coated surfaces.     

Raman spectroscopic investigation of gas interactions with an aligned multiwalled carbon nanotube membrane

Raman spectroscopy has been used to investigate ethane, propane, and SF6 interactions with an aligned multiwalled carbon nanotube (MWNT) membrane. Pressures of 7.5-9.3 atm and temperatures of 293-333 K were examined for propane and SF6, whereas slightly lower temperatures (263-293 K) and pressures (6.7-7.5 atm) were used for ethane. Red-shifting and broadening is seen for the C-C stretching vibrations of the two hydrocarbons, as well as for the A1g symmetric vibration (nu1) of SF6. These spectral features indicate that the interaction between the gas and the nanotube membrane is capable of perturbing molecular vibrations and creating red-shifted features. Control experiments done on polycrystalline graphite and a polystyrene blank indicate that this spectral behavior is unique to gases interacting with the nanotubes in the membrane.     

Effect of thermal treatment, ionic strength, and pH on the short-term and long-term coalescence stability of beta-lactoglobulin emulsions

We present experimental results about the effects of thermal treatment, ionic strength, and pH on the protein adsorption and coalescence stability of freshly prepared (2 h after emulsification) and 6-day-stored emulsions, stabilized by the globular protein beta-lactoglobulin (BLG). In all emulsions studied, the volume fraction of the dispersed soybean oil is 30% and the mean drop diameter is d(32) approximately 40 microm. The protein concentration, C(BLG), is varied between 0.02 and 0.1 wt %, the electrolyte concentration, C(EL), between 1.5 mM and 1 M, and pH between 4.0 and 7.0. The emulsion heating is performed at 85 degrees C, which is above the denaturing temperature of BLG. The results show that, at C(BLG) > or = 0.04 wt %, C(EL) > or = 150 mM, and pH > or = 6.2, the heating leads to higher protein adsorption and to irreversible attachment of the adsorbed molecules, which results in enhanced steric repulsion between the protein adsorption multilayers and to higher emulsion stability. At low electrolyte concentration, C(EL) < or = 10 mM, the emulsion stability is determined by electrostatic interactions and is not affected significantly by the emulsion heating. The latter result is explained by electrostatic repulsion between the adsorbed protein molecules, which keeps them separated from each other and thus precludes the formation of disulfide covalent bonds in the protein adsorption layer. The coalescence stability of heated and nonheated emulsions is practically the same and does not depend on C(EL), when pH is around the isoelectric point (IEP) of the protein molecules. This is explained with the adsorption of uncharged BLG molecules, in compact conformation, which stores the reactive sulfhydryl groups hidden inside the molecule interior, thus preventing the formation of covalent intermolecular bonds upon heating. We studied also the effect of storage time on the stability of heated and nonheated emulsions. The stability of nonheated emulsions (C(BLG) = 0.1 wt %, C(EL) > or = 150 mM, and pH = 6.2) significantly decreases after 1 day of storage (aging effect). In contrast, no aging effect is observed after emulsion heating. FTIR spectra of heated and nonheated, fresh and aged emulsions suggest that the aging effect is caused by slow conformational changes of the protein molecules in the adsorption layer, accompanied with partial loss of the ordered secondary structure of the protein and with the formation of lateral noncovalent bonds (H-bonds and hydrophobic interactions) between the adsorbed molecules. After thermal treatment of the BLG emulsions, the molecules preserve their original secondary structure upon storage, which eliminates the aging effect.