Thallium-205 NMR spectroscopy. Solvation of the thallous ion in dilute aqueous-amide and amide-amide binary solvent systems of formamide,N-methylformamide,andN-ethylformamide

Solvation of the thallous ion in dilute solutions of six binary solvent systems (formamide/water,N-methylformamide/water,N-ethylformamide/water, formamide/N-methylformamide, formamide/N-ethylformamide, andN-methylformamide/N-ethylformamide) was studied with²⁰⁵Tl NMR spectroscopy. An attempt was made to separate solvation effects related to the electrondonating ability (Lewis basicity) of the solvents from effects resulting from structural changes in the solvation sphere. Structural effects were found to be greatest in theN-methylformamide/water system and least in theN-methylformamide/formamide system.     

Proton and antiproton impact ionization of atomic hydrogen and helium

Single ionization of helium and atomic hydrogen by the impact of protons and antiprotons is considered. Using a multiple scattering model, first proposed by Garibotti and Miraglia [1], angular and energy distributions of the ejected electrons are calculated. Structures arising in the cross section, especially the Coulomb density of states effect (CDS), are analysed. The contributions of various scattering amplitudes to the cross section are studied. It is concluded that multiple scattering together with the CDS-effect play an important role in determining the transition amplitude. Differences between particle and antiparticle impact are examined. In addition to the different behaviour of the CDS-effect, the interference of two scattering amplitudes turns out to be decisive in ionization by particle and antiparticle impact.     

Mechanism of oxidation at a copper–polyethylene interface. II. Penetration of copper ions in the polyethylene matrix

Two surface analysis techniques (Rutherford backscattering and surface composition by analysis of neutral and ion impact radiation) have been applied to the study of interfacial copper transport in the oxidation of polyethylene films over copper surfaces. Analysis of films oxidized several thousand hours at 40, 57, and 87°C shows maximum concentrations of copper species in the polymer matrix of ～0.1M extending to depths of several thousand angstroms. These results, together with previous infrared spectroscopic studies, allow some significant conclusions and hypotheses to be drawn as regards the roles of heterogeneous and homogeneous catalytic processes which occur in the thermal-oxidative degradation of polyethylene–copper systems.     

In situ scanning tunneling microscopy: New insight for electrochemical electrode-surface investigations

The successful expansion which the scanning tunneling microscopy (STM) has had is dependent on its ability to examine surfaces on a sub-nanometric scale and on providing in situ (i.e. in the presence of bulk electrolyte) sample examination. In addition to the ability to study metals and semiconductors in vacuo, the application of the technique to surfaces in contact with an electrolytic solution has prompted increased interest amongst electrochemists. We discuss herein the technique, with particular reference to advances in electrochemical applications. A new scanning tunneling microscope for operation in electrolytic environments is described. Atomic force microscopy, scanning electrochemical microscopy and scanning ion-conducting microscopy are compared with the STM.     

Synthesis, structure, and properties of Cs(4)Th(4)P(4)Se(26): a quaternary thorium selenophosphate containing the (P(2)Se(9))(6-) anion

Orange crystals of Cs(4)Th(4)P(4)Se(26) were grown from the reaction of (232)Th and P in a Cs(2)Se(3)/Se molten salt flux at 750 degrees C. Cs(4)Th(4)P(4)Se(26) crystallizes in the orthorhombic space group Pbca with the unit cell parameters: a = 12.0130(6), b = 14.5747(7), c = 27.134(1) A; Z = 8. The compound exhibits a three-dimensional structure, consisting of dimeric [Th(2)Se(13)] polyhedral units. The two crystallographically independent, nine-coordinate, bicapped trigonal prismatic thorium atoms share a triangular face to form the dimer, and each dimer edge-shares two selenium atoms with two other dimers to form kinked chains along the [010] direction. While this structure shares features of the previously reported Rb(4)U(4)P(4)Se(26), including phosphorus in the 5+ oxidation state, careful inspection of the structure reveals that the selenophosphate anion that knits the structure together in three directions in both compounds is a unique (P(2)Se(9))(6-) anion. The formula may be described best as [Cs(2)Th(2)(P(2)Se(9))(Se(2))(2)](2). The (P(2)Se(9))(6-) anion features a nearly linear Se-Se-Se backbone with an angle of 171 degrees and Se-Se distances that are approximately 0.2-0.3 A longer than the typical single Se-Se bond. Magnetic studies confirm that this phase contains Th(IV). Raman data for this compound is reported, and structural comparisons will be drawn to its uranium analogue, Rb(4)U(4)P(4)Se(26).     

A structure-based design approach for the identification of novel inhibitors: application to an alanine racemase

We report a new structure-based strategy for the identification of novel inhibitors. This approach has been applied to Bacillus stearothermophilus alanine racemase (AlaR), an enzyme implicated in the biosynthesis of the bacterial cell wall. The enzyme catalyzes the racemization of l- and d-alanine using pyridoxal 5-phosphate (PLP) as a cofactor. The restriction of AlaR to bacteria and some fungi and the absolute requirement for d-alanine in peptidoglycan biosynthesis make alanine racemase a suitable target for drug design. Unfortunately, known inhibitors of alanine racemase are not specific and inhibit the activity of other PLP-dependent enzymes, leading to neurological and other side effects.This article describes the development of a receptor-based pharmacophore model for AlaR, taking into account receptor flexibility (i.e. a `dynamic' pharmacophore model). In order to accomplish this, molecular dynamics (MD) simulations were performed on the full AlaR dimer from Bacillus stearothermophilus (PDB entry, 1sft) with a d-alanine molecule in one active site and the non-covalent inhibitor, propionate, in the second active site of this homodimer. The basic strategy followed in this study was to utilize conformations of the protein obtained during MD simulations to generate a dynamic pharmacophore model using the property mapping capability of the LigBuilder program. Compounds from the Available Chemicals Directory that fit the pharmacophore model were identified and have been submitted for experimental testing.The approach described here can be used as a valuable tool for the design of novel inhibitors of other biomolecular targets.     

Purification by HPLC and the UV/Vis absorption spectra of the nitrogen-containing incar-fullerenes iNC60, and iNC70

We report the purification of the nitrogen-containing incar-fullerenes iNC(60) and iNC(70), and their characterisation by UV-Vis absorption spectroscopy.     

CHARACTERIZATION OF THE RED LIGHT INDUCED REDUCTION OF A PARTICLE ASSOCIATED b-TYPE CYTOCHROME FROM CORN IN THE PRESENCE OF METHYLENE BLUE*

Methylene blue transfers electrons to a membrane-associated b-type cytochrome in particulate fractions from corn coleoptiles. The K_m for methylene blue is less than 1 µM under optimal conditions. This reaction is destroyed by boiling, but not by 7 M urea. Kinetic analyses of the influence of light intensity on cytochrome reduction suggest that a first order photochemical reaction is limiting. Free EDTA may serve as an electron donor in this system at least at high methylene blue and protein concentrations. The photoactivity does not coincide either with mitochondrial or endoplasmic reticulum markers, and may be localized in plasma membrane. There is an estimated 5 times 10^-10 mol photoreducible cytochrome per g coleoptile tissue. Studies on the effect of pH on the reaction in the presence of methylene blue or thionine indicate that dye photoreduction itself is not rate-limiting. Wavelength dependence studies suggest that it is methylene blue monomer and not dimer which mediates the reaction. Although oxygen is apparently required for the reaction, neither superoxide nor excited singlet oxygen appear to be involved. The reaction mechanism is still unknown.