Ab initio computation of force constants: Part VI. Applications of the force relaxation method for geometry optimization

Techniques to improve the computational efficiency of the force relaxation method are discussed. Force constants for fragments in previously computed smaller molecules can be transferred to construct a guess force constant matrix. Additional force constants that may be needed can be computed by a procedure which uses only one additional force calculation per diagonal force constant required. A scaling technique to improve convergence on the optimized geometry is discussed.     

Lateral growth rates in laser CVD of microstructures

Lateral growth rates of Ni spots deposited on absorbing substrates by decomposition of Ni(CO)₄ with visible Kr⁺ laser light have been measured. The experimental data are consistent with the calculated temperature distributions. The mechanism of decomposition is thermal with an apparent chemical activation energy of 22±3 kcal/mole for the temperature range 350 KT500 K.     

Synthesis of [(MeCyt)2H]I-structure and stability of a dimeric threefold hydrogen-bonded 1-methylcytosinium 1-methylcytosine cation

Reaction of trimethylsilyl-protected cytosine with methyl iodide afforded N1-methylated product. Subsequent treatment with ethanol resulted in cleavage of the protection group forming [(MeCyt)2H]I (4). Identity of was confirmed by microanalysis, mass spectrometry, 1H and 13C NMR spectroscopy and by single-crystal X-ray diffraction analysis. Crystals of consist of dimeric [(MeCyt)2H]+ cations and I- anions. These ions are arranged in the crystal such that there is a strong base stacking (mean stacking distance 3,467 angstroms) and, furthermore, pi interactions between I- and cytosine rings (mean distance 3,737 angstroms). The dimeric [(MeCyt)2H]+ cations are centrosymmetric having three strong hydrogen bonds, namely two terminal N4-H...O' ones (N4...O' 2.815(4) angstroms) and a central N3-H...N3' (N3...N3' 2.813(4) angstroms) one. Quantum chemical calculations on the DFT level of theory show that the gas phase structure of the dimeric cation exhibits two different terminal N-HO hydrogen bonds, a stronger (N4...O' 2.722 angstroms) and a weaker one (N4'...O 2.960 angstroms). The central N3-HN3[prime or minute] hydrogen bond (N3...N3' 2.852 angstroms) was characterized to have an unsymmetrically located proton and a typical double minimum potential with a very low activation barrier. The interaction energy between [(MeCyt)H]+ and MeCyt yielding [(MeCyt)2H]+ was calculated to be -42.4 kcal mol(-1)(ZPE and BSSE corrected). Comparison with the interaction energy (calculated on the same level of the theory) between cytosine and guanine yielding the triply hydrogen-bonded Watson-Crick dimer (-24.2 kcal mol(-1)) revealed a much higher stability of the hydrogen bonds in [(MeCyt)2H]+.     

Struktur von S-9,10-Dimethyl-1,3,5,7-tetraarsa-2,4,6,8-tetraoxaadamantan und 9,10-Diethyl-1,3,5,7-tetraarsa-2,4,6,8-tetraoxaadamantan

Structure of S-9,10-Dimethyl-1,3,5,7-tetraarsa-2,4,6,8-tetraoxaadamantane and 9,10-Diethyl-1,3,5,7-tetraarsa-2,4,6,8-tetraoxaadamantane S-9,10-Dimethyl-1,3,5,7-tetraarsa-2,4,6,8-tetraoxaadamantane ( 1 ) and 9,10-diethyl-1,3,5,7-tetraarsa-2,4,6,8-tetraoxaadamantane ( 2 ) have been prepared by the reaction of propionic acid, propionic anhydride and butyric acid, butyric anhydride, respectively, with arsenic(III)-oxide. The crystals of 1 are rhombic, a = 6.902(4), b = 11.121(5), c = 13.988(8), space group P2₁2₁2₁. The crystals of 2 are monoclinic, a = 11.757(10), b = 11.255(10), c = 18.631 (18), β = 91.78(7), space group P2₁/n. The mean bond lengths and angles in 1 are AsO = 1.790 Å, AsC = 1.959 Å, OAsO = 100.60°, CAsO = 99.65°, AsOAs = 128.77°, AsCAs = 118.73°, and in 2 they are AsO = 1.780 Å, AsC = 1.978 Å, OAsO = 101.45°, CAsO = 99.55°, AsOAs = 129.64°, AsCAs = 117.72°.     

Der Stoffwechsel von Verbindungen mit Dreifachbindung. VI. Stoffwechselverhalten von Alkincarbonsäuren und Alkindicarbonsäuren

Metabolism of Acetylenic Monocarboxylic and Dicarboxylic Acids Feeding of acetylenic monoacids with chain length of 11 to 18 C-atoms to rats led to excretion of dicarboxylic acids with retained triple bonds. 10-Octadecynoic acid led to the formation of metabolites with even and odd number of C-atoms, suggesting in addition to established ω- and β-oxidation an α-oxidative pathway.     

Bond lengthening and through-bond interactions in p,p'-dibenzene and related molecules

The structure of p,p'-dibenzene (PDB) has been investigated by full geometry optimizations using the empirical force field (EFF) and MINDO/3 methods. While other structural parameters are in good agreement, the central bond length calculated by MINDO/3 (1.595 Å), as confirmed by an ab initio (STO-3G basis set) optimization (1.596 Å), is in striking contrast to the corresponding length calculated by EFF (1.543 Å). A detailed analysis of the electronic structure of PDB based on a quantitative perturbational molecular orbital treatment reveals that through-bond coupling of the four π systems is responsible for an elongation of the σ bond which mediates this interaction. Further studies using the EFF and MINDO/3 approaches demonstrate that extended C-C single bonds can arise even in structures with fewer than four π systems. The effect of substituents on the central bond length in PDB has been briefly investigated. (MINDO/3). A variety of other structures have been identified in which bond lengthening may result from through-bond coupling.     

Die Zusammensetzung der Neutrallipide aus normalen Hirnen alter Menschen

The chemical composition of lipids from six human brains (60–73 years) is reported. The total lipids out of cortex, white matter, diencephalon and cerebellum, pons, and medulla oblongata have been isolated and the neutral lipids have been separated in cerebrosides, sphingomyelines, and lecithins. The highest amount of pure lipids is found in the white matter, the lowest in the cortex. The relation of neutral lipids to acid lipids as well as the amount of cholesterol are about equal for all regions. The white matter shows more cerebrosides and sphingomyelines than the cortex, the opposite being the case for lecithins. The differences are strongly significant. The fatty acids out of the different pure lipid fractions have been analysed as esters by gas chromatography. Stearic and lignoceric acid, and cerebronic and hydroxy nervonic acid respectively are main components of cerebrosides, with only little differences for the different brain regions. The fatty acids of sphingomyelines consist mainly of stearic and nervonic acid; in the white matter these two acids are present about in the same quantity, whereas stearic acid dominates in the cortex and the other sections. Lecithins contain above all palmitic and oleic acid. The amount of the latter in the white matter is higher than that of palmitic acid.     

Dissoziative ionisierung von 2-trimethylsilyl-1-phenoxyethan. Nachweis des nicht-klassischen ethylen-trimethylsilanium-ions in der gasphase

The mass spectrometric investigation of specifically deuterium and ¹³C labelled 2-trimethylsilyl-l-phenoxyethanes proves that the dissociative ionization of β-silyl-substituted ethane derivatives (loss of PhO^?; p-CH₃C₆H₄O^?; and C₄H^?₉ from PhOCH₂CH₂SiMe₃, p-MeC₆H₄OCH₂CH₂SiMe₃ and CH₃CH₂CH(CH₃)CH₂-CH₂SiMe₃, respectively) yields the non-classical bridge ethylene trimethylsilanium ion and not the open-chain isomer. Other stable C₅H₁₃Si^+? ions, characterised by collisional activation mass spectrometry, are the dimethyl n-propyl silicenium ion and the l-trimethylsilyl ethyl cation, both generated from the molecular ions of CH₃CH₂CH₂Si(Cl)Me₂ and CH₃CH(Cl)SiMe₃ via unimolecular loss of Cl^?.