Chemometrics: an important tool for the modern chemist, an example from wood-processing chemistry

This study briefly outlines the idea of principal component analysis and cross-correlation calculations (applied chemometrics) and presents an illustrative example from wood-processing chemistry. The applicability of chemometric data analysis was demonstrated by investigating the various structural changes that take place in dissolved and degraded lignin ("kraft lignin") during laboratory-scale kraft pulping of Scots pine (Pinus sylvestris) and silver birch (Betula pendula). The structural data (31P NMR and size exclusion chromatographic data) on kraft lignin were further processed by chemometric multivariate techniques (PCA and 2DCC), confirming, for example, that the cleavage of beta-aryl ether structures, the most prominent linkages between monomeric units, is directly related to the decrease in the average molecular mass of lignin.     

A succession of isomers of ruthenium dihydride complexes. Which one is the ketone hydrogenation catalyst?

Reaction of RuHCl(PPh(3))(2)(diamine) (1a, diamine = (R,R)-1,2-diaminocyclohexane, (R,R)-dach; 1b, diamine = ethylenediamine, en) with KO(t)Bu in benzene quickly generates solutions of the amido-amine complexes RuH(PPh(3))(2)(NHC(6)H(10)NH(2)), (2a'), and RuH(PPh(3))(2)(NHCH(2)CH(2)NH(2)), (2b'), respectively. These solutions react with dihydrogen to first produce the trans-dihydrides (OC-6-22)-Ru(H)(2)(PPh(3))(2)(diamine) (t,c-3a, t,c-3b). Cold solutions (-20 degrees C) containing trans-dihydride t,c-3a react with acetophenone under Ar to give (S)-1-phenylethanol (63% ee). Complexes t,c-3 have lifetimes of less than 10 min at 20 degrees and then isomerize to the cis-dihydride, cis-bisphosphine isomers (OC-6-32)-Ru(H)(2)(PPh(3))(2)(diamine) (Delta/Lambda-c,c-3a, c,c-3b). A solution containing mainly Delta/Lambda-c,c-3a reacts with acetophenone under Ar to give (S)-1-phenylethanol in 20% ee, whereas it is an active precatalyst for its hydrogenation under 5 atm H(2) to give 1-phenylethanol with an ee of 50-60%. Complexes c,c-3 isomerize to the cis-dihydride, trans-bisphosphine complexes (OC-6-13)-Ru(H)(2)(PPh(3))(2)(diamine) (c,t-3a, c,t-3b) with half-lives of 40 min and 1 h, respectively. A mixture of Delta/Lambda-c,c-3a and c,t-3a can also be obtained by reaction of 1a with KBH(Bu(sec))(3). A solution of complex c,t-3a in benzene under Ar reacts very slowly with acetophenone. These results indicate that the trans-dihydrides t,c-3a or t,c-3b along with the corresponding amido-amine complexes 2a' or 2b' are the active hydrogenation catalysts in benzene, while the cis-dihydrides c,c-3a or c,c-3b serve as precatalysts. The complexes RuCl(2)(PPh(3))(2)((R,R)-dach) or 1a, when activated by KO(t)Bu, are also sources of the active catalysts. A study of the kinetics of the hydrogenation of acetophenone in benzene catalyzed by 3a indicates a rate law: rate = k[c,c-3a](initial)[H(2)] with k = 7.5 M(-1) s(-1). The turnover-limiting step appears to be the reaction of 2a' with dihydrogen as it is for RuH(NHCMe(2)CMe(2)NH(2))(PPh(3))(2) (2c'). The catalysts are more active in 2-propanol, even without added base, and the kinetic behavior is complicated. The basic cis-dihydride c,t-3a reacts with [NEt(3)H]BPh(4) to produce the dihydrogen complex (OC-14)-[Ru(eta(2)-H(2))(H)(PPh(3))(2)((R,R)-dach)]BPh(4) (4) and with diphenylphosphinic acid to give the complex RuH(O(2)PPh(2))(PPh(3))(2)((R,R)-dach) (5). The structure of 5 models aspects of the transition state structure for the ketone hydrogenation step. Complex 2b' decomposes rapidly under Ar to give dihydrides 3b along with a dinuclear complex (PPh(3))(2)HRu(mu-eta(2);eta(4)-NHCHCHNH)RuH(PPh(3))(2) (6) containing a rare, bridging 1,4-diazabutadiene group. The formation of an imine by beta-hydride elimination from the amido-amine ligand of 2a' under Ar might explain some loss of enantioselectivity of the catalyst. The structures of complexes 1a, 5, and 6 have been determined by single-crystal X-ray diffraction.     

Novel dinuclear and trinuclear palladium beta-diiminate complexes containing amido-chloro double-bridges

We report the formation of an unexpected trinuclear palladium beta-diiminate complex from the decomposition of [Pd(Ph(2)nacnac)(Cl)(4-H(2)NC(6)H(4)-(t)Bu)] (nacnac = beta-diiminate derived from acetylacetone), the proposed reaction pathway, and the synthesis of the first dinuclear palladium complex with an amido-chloro double-bridge.     

Novel hydrido-ruthenium(II) complexes with histidine derivatives and their application in the hydrogenation of ketones

The complexes RuHCl((R)-binap)(L-NH2) with L-NH2 = (S)-histidine-Me-ester (1), histamine (3), (S)-histidinol (4) or 1-Me-(S)-histidine-Me-ester (5), and RuHCl((S)-binap)(L-NH(2)) with L-NH2 = (S)-histidine-Me-ester (2) have been prepared in 60-81% overall yields in a one-pot, three-step procedure from the precursor RuCl2(PPh3)3. Their octahedral structures with hydride trans to chloride were deduced from their NMR spectra and confirmed by the results of a single crystal X-ray diffraction study for complex 3. Under H2 and in the presence of KOtBu, complexes 1-5 in 2-propanol form moderately active catalyst precursors for the asymmetric hydrogenation of acetophenone to 1-phenylethanol. Complex 5 is more active and enantioselective than complexes 1-4, allowing complete conversion to 1-phenylethanol in 46% e.e. (R) in 72 h at 20 degrees C under 1 MPa of H2 with substrate : catalyst : base = 2000 : 1 : 30. Complex 5, when activated, also catalyzes the hydrogenation of trans-4-phenyl-3-buten-2-one to exclusively the allyl alcohol 4-phenyl-3-buten-2-ol under 2.7 MPa of H2 at 50 degrees C in 2-propanol. This selectivity for C=O versus C=C hydrogenation is consistent with a mechanism involving the outer sphere transfer of hydride and proton to the polar bond. Further extensions to complexes with peptides with N-terminal histidine groups appear feasible on the basis of the current work.     

Ultrasensitive Anion Detection by NMR Spectroscopy: A Supramolecular Strategy Based on Modulation of Chemical Exchange Rate

NMR spectroscopy is a powerful tool for monitoring molecular interactions and is widely used to characterize supramolecular systems at the atomic level. NMR is limited for sensing purposes, however, due to low sensitivity. Dynamic processes such as conformational changes or binding events can induce drastic effects on NMR spectra in response to variations in chemical exchange (CE) rate, which can lead to new strategies in the design of supramolecular sensors through the control and monitoring of CE rate. Here, we present an indirect NMR anion sensing technique in which increased CE rate, due to anion‐induced conformational flexibility of a relatively rigid structure of a novel sensor, allows ultrasensitive anion detection as low as 120 nM .     

Identification of shikonin and its ester derivatives from the roots of Echium italicum L.

Nine shikonin pigments: shikonin (S), acetylshikonin (AS), propionylshikonin (PS), isobutyrylshikonin (IBS), tiglylshikonin (TS), 3,3-dimethylacrylshikonin (DAS), angelylshikonin (ANS), 2-methyl-n-butyrylshikonin (MBS) and isovalerylshikonin (IVS) were identified in the root epidermis of Echium italicum L. for the first time. A new thin-layer chromatographic (TLC) method for the separation of enantiomers alkannin and shikonin proved only shikonin after saponification of the root extract, and was afterwards esterified with the corresponding acyl chloride to acquire seven standard compounds (all except ANS). The developed isocratic high-peformance liquid chromatographic (HPLC) methods with VIS and mass spectrometry (MS) detection, allowed for the first time simultaneous separation of all nine compounds with similar structures including positional and geometric isomers in a short time. Structures of the main five compounds (AS, IBS, ANS, MBS, IVS) isolated from the extract by a new semi-preparative HPLC on C18 have additionally been confirmed by ¹H and ¹³C nuclear magnetic resonance spectra, which were reported for AS and MBS for the first time.     

F-actions and parallel-product decomposition of reflexible maps

The parallel product of two rooted maps was introduced by S.E. Wilson in 1994. The main question of this paper is whether for a given reflexible map M one can decompose the map into a parallel product of two reflexible maps. This can be achieved if and only if the monodromy (or the automorphism) group of the map has at least two minimal normal subgroups. All reflexible maps up to 100 edges, which are not parallel-product decomposable, are calculated and presented. For this purpose, all degenerate and slightly-degenerate reflexible maps are classified. In this paper the theory of F-actions is developed including a classification of quotients and parallel-product decomposition. Projections and lifts of automorphisms for quotients and for parallel products are studied. The theory can be immediately applied on rooted maps and rooted hypermaps as they are special cases of F-actions.     

Chemistry of ruthenium(II) monohydride and dihydride complexes containing pyridyl donor ligands including catalytic ketone H2-hydrogenation

In this study we determine the changes to the properties of dihydride catalysts for ketone H2-hydrogenation by successively replacing the amine donors in the known dach complex RuH2(PPh3)2(dach) (2a), dach = 1,2-(R,R)-diaminocyclohexane, with one pyridyl group in the corresponding 2-(aminomethyl)pyridine (ampy) complexes RuH2(PPh3)2(ampy) (2b) and with two pyridyl groups in the complexes RuH2(PPh3)2(bipy) (2c) and RuH2(PPh3)2(phen) (2d). The ruthenium monohydride complex, (OC-6-54)-RuHCl(PPh3)2(ampy), (1b with Cl trans to H) was prepared by the addition of 1 equiv of ampy to RuHCl(PPh3)3 in THF. Treatment of the monohydride complex with K[BH(sec-Bu)3] in THF or KOtBu/H2 in toluene resulted in the formation of a mixture of at least two isomers of the highly reactive, air-sensitive ruthenium dihydride complex 2b. One is the cis dihydride (OC-6-14)-2b or more simply c,t-2b with trans PPh3 groups and another is the cis dihydride c,c-2b (OC-6-42) that has PPh3 trans to H and PPh3 trans to N(pyridyl). The isomer c,c-2b slowly converts to c,t-2b in solution. The reaction of 1b with KOtBu under Ar results in the formation of a mixture that includes a complex with an imino ligand HN=CH-2-py while the same reaction under H2 leads to c,c-2b and then c,t-2b. The dach complex c,t-2a, reacts with ampy, 2,2'-bipyridine (bipy), and 1,10-phenanthroline (phen) in refluxing THF to form the substituted cis-dihydride complexes c,t-2b, (OC-6-13)-RuH2(PPh3)2(bipy) (c,t-2c with trans PPh3 groups) and (OC-6-13)-RuH2(PPh3)2(phen), c,t-2d, respectively. The dihydrides containing amino groups and cis-PPh3 groups, i.e., c,c-2a or c,c-2b, are active precatalysts for the H2-hydrogenation of acetophenone (neat or in benzene) under mild reaction conditions, whereas those with trans-PPh3 groups, c,t-2a and c,t-2b are much less active. The combination of ampy complex 1b and KOtBu also provides a catalyst in benzene that is more active than the corresponding dach system. The complexes without amino groups c,t-2c and c,t-2d are air-stable and inactive as hydrogenation catalysts under comparable conditions. The mechanism of hydrogenation of ketones catalyzed by isomers of 2a,b is thought to be similar and to proceed via a trans-dihydride complex, t,c-2a or t,c-2b, and an amido complex, neither of which are directly observed for the ampy complexes. The dihydride complex c,t-2b reacts with formic acid to give (OC-6-45)-RuH(OCHO)(PPh3)2(ampy), 3b, with formate trans to hydride. The structures of 1b, c,t-2b, c,t-2c, and 3b have been determined by single-crystal X-ray diffraction.