G-triplex stability in human telomeric DNA with epigenetic modification/oxidative damage to thymine

Journal of Thermal Analysis and Calorimetry - Rigid polyurethane foam (PUF) is one of the outstanding insulation materials and has been widely used in freezers and cryogenic facilities. Among the...     

Nanoscale characterization of single Au nanorods by confocal microscopy

We analyzed the scattering patterns of individual Au nanorods detected by means of confocal interference scattering microscopy in combination with a higher order laser mode. We placed the Au nanorods at the interface between two dielectric media and examined the influence of different interfaces on the signal amplitude, the signal-to-noise ratio as well as on the precision of topological measurements. Approaching the index matching regime allows for topological measurements with high accuracy minimizing the acquisition time. We were also able to track the position and the orientation of particles embedded in water even when they were not thoroughly sticking to the glass surface. These results underscore the potential of the presented technique for applications in life sciences.     

Application of second-order density functional methods to the calculation of the BeFH potential energy surface

Second-order density functional methods (where the correlation energy depends on the second-order density matrix and on a density functional) are used to introduce the electron correlation in two-configuration direct minimization (TCDM) ab initio electronic energy calculations of three-dimensional potential energy surfaces (PES). We analyzed the behavior of these methods in PES calculations by applying them to the Be + FH reaction. This system was studied also by the usual techniques, allowing a full comparison for the lowest ¹A′ adiabatic state. In particular, we compared the results obtained using the TCDM and multiple reference single and double excitations configuration interaction (MRDCI) methods with the corresponding results obtained using the Colle-Salvetti (CS) and Moscardó-San Fabián (MSF) procedures, within the correlation factor method, using as starting point the TCDM results. We found that the CS and MSF results are in a good overall agreement with the more accurate ab initio results, including the heights of the saddle points and the transition state. © 1997 John Wiley & Sons, Inc.     

Surface tension for octafluorocyclobutane,n-butane and their mixtures from 233 K to 254 K,and vapour pressure,excess Gibbs function and excess volume for the mixture at 233 K

The surface tensions of octafluorocyclobutane (234 to 267 K), n-butane (238 to 273 K) and of their mixtures (232 to 254 K) have been measured by differential capillary rise; there is a slight minimum in the isotherms near x(c-C₄F₈) ≈ 0.8 but no maximum. The total vapour pressure and density of the liquid mixture were measured at the triple point temperature of c-C₄F₈, 233 K. The mixture displays marked positive azeotropy. The excess Gibbs function and excess volume are both large and positive but the deviation from ideality is insufficient for liquid—liquid immiscibility whose absence was confirmed by visual observation at temperatures down to the solid—liquid phase boundary. All the foregoing are consistent with theoretical expectations based upon the dominant effect of an interaction energy between the unlike components which is smaller than that predicted by the Berthelot geometric mean rule. No inferences can be drawn as to the role of chain flexibility.     

Toxicity of citrate-capped AuNPs: an in vitro and in vivo assessment

In this study, we show that 15 nm citrate-capped AuNPs exert a remarkable toxicity in living systems. The assessment was performed by using well-characterized AuNPs, the combination of in vitro and in vivo models (namely two different cell lines and Drosophila melanogaster), exposure to low dosages of nanoparticles (in the sub-nanomolar concentration range), along with the application of several biological assays to monitor different aspects of the toxic effects, such as viability, genotoxicity, and molecular biomarkers.     

Surfactant protein C metabolism in human infants and adult patients by stable isotope tracer and mass spectrometry

Surfactant protein C (SP-C) is deemed as the surfactant protein most specifically expressed in type II alveolar epithelial cells and plays an important role in surfactant function. SP-C turnover in humans and its meaning in the clinical context have never been approached. In this study, we used mass spectrometry to investigate SP-C turnover in humans. We studied four infants and eight adults requiring mechanical ventilation. All patients had no lung disease. Patients received a 24-h continuous infusion of ¹³C-leucine as precursor of SP-C, and serial tracheal aspirates and plasma samples were obtained every 6 h till 48 h. SP-C was isolated from tracheal aspirates by sorbent-phase chromatography. ¹³C-leucine SP-C enrichment could be successfully measured in three infant and in four adult samples by using mass spectrometry coupled with a gas chromatographer. Median SP-C fractional synthesis rate, secretion time, and peak time were 15.7 (14.1–27.5) %/day, 6.0 (4.7–11.5) h, and 24 (20–27) h. In conclusion, this study shows that it is feasible to accurately determine SP-C turnover in humans by stable isotopes.     

Simplified method for microlitre deuterium measurements in water and urine by gas chromatography-high-temperature conversion-isotope ratio mass spectrometry

Deuterium (2H) in water and urine can be measured by off-line and, more recently, on-line techniques using isotope ratio mass spectrometry (IRMS). We describe a new simple on-line pyrolysis method for the analysis of 2H/1H in water and urine samples by continuous flow IRMS, normally used for 2H/1H measurements in organic compounds. A deactivated column connected the split injector to a high-temperature conversion reactor (TC HD), and 0.5 microL of sample was injected. Accuracy and precision were determined with Vienna Standard Mean Ocean Water (VSMOW), Standard Light Antarctic Precipitation (SLAP), and Greenland Ice Sheet Precipitation (GISP). The range of linearity was measured with a calibration curve of enriched water from 0 up to 0.1 atom percent excess (APE) (i.e. -72 up to 6323 delta per mil (deltaD per thousand)) with a precision of <5 per thousand and accuracy ranging between 1 and 55 per thousand. Blinded reanalysis of urine samples by an equilibration device (Gas Bench) and by a dedicated pyrolysis system (TC/EA) was performed and results compared by the Bland-Altman test. Enrichments ranged between 600 and 2400 per thousand deltaD(VSMOW) with a precision of +/-5 per thousand. Urine enrichments described by our method were strongly correlated with values obtained by Gas Bench and TC/EA (p < 0.0001). There was a significant memory effect that was reduced by injecting the sample 15 times and discarding the first 10 injections, together with accurate furnace conditioning and appropriate cleaning of the syringe. Data indicate that the method is accurate, and that it can be used for water and urine deuterium determination when a Gas Bench or TC/EA instrument is not available and the amount of sample is limited.     

Determination of the carbon isotopic composition of whole/intact biological specimens using at-line direct thermal desorption to effect thermally assisted hydrolysis/methylation

In this paper, we discuss the use of a direct thermal desorption (DTD) interface as an alternative to Curie-point flash pyrolysis system as an inlet technique in gas chromatography-combustion isotope-ratio mass spectrometry (GC/C-IRMS) analysis of whole/intact phytoplankton and zooplankton specimens. The DTD in combination with a combipal auto-injector is programmed to perform the injection, evaporation of solvents, transport of capped programmed-temperature vaporizer (PTV) liners to the PTV injector and chemical derivatisation (thermally assisted hydrolysis/methylation; THM) such that a profile of a cellular fatty acids is obtained. Flow-cytometric sorted microalgae and handpicked zooplankton are used as samples with trimethylsulfonium hydroxide (TMSH) as methylating reagent. A major advantage of this novel approach over the Curie-point technique is the automation of the total procedure, which allows unattended analysis of large sample series. The profiles and delta(13)C carbon isotopic signatures of the fatty acid methyl esters (FAMEs) produced are very similar to those obtained using the Curie-point flash pyrolysis method. It is shown that algal samples must be kept no longer than 48 h in the DTD sample tray prior to the THM-analysis in order to maintain the integrity of their FAME profile.     

Towards ultra-responsive biodegradable polysaccharide humidity sensors

Sodium alginate is a biodegradable natural polymer that is derived from algae and is water soluble. Upon immersion in a CaCl₂ solution, a sodium alginate water solution is cross-linked to form water-insoluble calcium alginate. When the sodium alginate water solution is immersed in the CaCl₂ bath via a syringe pump, calcium alginate fibers are produced. By changing the CaCl₂ concentration, calcium alginate fibers with different degrees of cross-linking can be produced. Such fibers were found to differ in mechanical and morphological properties, and more interestingly, were found to possess humidity sensing and conductive properties. Interestingly, the higher the CaCl₂ concentration, the lower the degree of cross-linking, which produced softer fibers with better humidity sensing and conductive properties. The fibers were able to trap water in their structures, and a higher water content increased the conductivity due to the presence of an electrolyte salt in the fiber and due to the polyelectrolyte nature of the fiber itself. The cross-linking and percent shrinking degree, morphology and mechanical properties of the fibers were found to create significant changes in the conductivity and humidity sensing properties of the fibers. High humidity environments led to an increase in the conductivity of the fibers, whereas dry environments led to a decrease in the conductivity. The fibers, especially those with the highest CaCl₂ concentration, were determined to be ultra-responsive to humidity changes and exhibited very good repetition in humidity cycles. These tailored fibers are proposed as novel biodegradable conductive materials for various humidity sensing, robotic and bio-robotic applications.