Integrated microfabricated systems including a purification module and an on-chip nano electrospray ionization interface for biological analysis

We report here on an integrated microfabricated device dedicated to the preparation of biological samples prior to their on-line analysis by electrospray ionization-mass spectrometry (ESI-MS). This microfluidic device is fabricated using the negative photoresist SU-8 by microtechnology techniques. The device includes a chromatographic module plus an ESI interface for MS. The chromatographic module is dedicated to sample purification and is based on a polymer monolithic phase which includes hydrophobic moieties. The ESI interface is integrated onto the chip and is based on a capillary slot. We present here the integration of these different modules onto a single system that is fabricated via a SU-8-based microtechnology route. We present also their testing for the purification of peptide samples. This started with a partial integration step with the combination of at least two of the modules (microsystem + monolith; microsystem + nib) and their test before the fabrication and testing of fully integrated microsystems.     

Local and global chirality at surfaces: succinic acid versus tartaric acid on Cu110

A detailed comparison of tartaric acid (HOOC-CHOH-CHOH-COOH) and succinic acid (HOOC-CH(2)-CH(2)-COOH) molecules on a Cu(110) surface is presented with a view to elucidate how the two-dimensional chirality exhibited by such robust, chemisorbed systems is affected when both OH groups of the former molecule are replaced with H groups, a stereochemical change that leaves the metal-bonding functionalities of the molecule untouched but destroys both chiral centers. It is found that this change does not significantly affect the thermodynamically preferred chemical forms that are adopted, namely the doubly deprotonated bicarboxylate at low coverages (theta 相似文献   

A stereoelectronic effect on turn formation due to proline substitution in elastin-mimetic polypeptides

Stereoelectronic effects have been identified as contributing factors to the conformational stability of collagen-mimetic peptide sequences. To assess the relevance of these factors within other protein structural contexts, three polypeptide sequences were prepared in which the sequences were derived from the canonical repeat unit (Val-Pro-Gly-Val-Gly) of the protein material elastin. These elastin-mimetic polypeptides, elastin-1, elastin-2, and elastin-3, incorporate (2S)-proline, (2S,4S)-4-fluoroproline, and (2S,4R)-4-fluoroproline, respectively, at the second position of the elastin repeat. Calorimetric and spectroscopic investigations of these three polypeptides indicate that the incorporation of the substituted proline residues had a dramatic effect upon the self-assembly of the corresponding elastin peptide. The presence of (2S,4R)-4-fluoroproline in elastin-3 lowered the temperature of the phase transition and increased the type II beta-turn population with respect to the parent polypeptide, while the presence of (2S,4S)-4-fluoroproline in elastin-2 had the opposite effect. These results suggest that stereoelectronic effects could either enhance or hinder the self-assembly of elastin-mimetic polypeptides, depending on the influence of the proline analogue on the energetics of the beta-turn conformation that develops within the pentapeptide structural repeats above the phase transition. Density functional theory (DFT) was employed to model three possible turn types (betaI-, betaII-, and inverse gamma-turns) derived from model peptide segments (MeCO-Xaa-Gly-NHMe) (Xaa = Pro, 4S-F-Pro, or 4R-F-Pro) corresponding to the turn-forming residues of the elastin repeat unit (Val-Pro-Gly-Val-Gly). The results of the these calculations suggested a similar outcome to the experimental data for the elastin-mimetic polypeptides, in that type II beta-turn structures were stabilized for peptide segments containing (2S,4R)-fluoroproline and destabilized for segments containing (2S,4S)-fluoroproline relative to the canonical proline residue.     

Basis set and density functional dependence of vibrational Raman optical activity calculations

We present an extensive investigation of the dependence of the scattering intensity difference of right and left circularly polarized light observed in vibrational Raman optical activity (VROA) on the choice of basis set and exchange-correlation functional. These dependencies are investigated for five molecules for which accurate experimental data are available: (S)-methyloxirane, (R)-epichlorhydrin, (S)-glycidol, (M)-spiro[2,2]pentane-1,4-diene, and (M)-sigma-[4]-helicene. Calculations are presented using the SVWN exchange-correlation functional (LDA), the BLYP exchange-correlation functional, and the B3LYP hybrid functional, using six different basis sets: the cc-pVDZ, cc-pVTZ, aug-cc-pVDZ, aug-cc-pVTZ, Sadlej's polarized basis set, and a minimal VROA basis set recently proposed by Zuber and Hug. It is demonstrated that results from pure gradient-corrected and hybrid functionals are comparable and that the aug-cc-pVDZ and aug-cc-pVTZ basis sets yield similar results. Furthermore, the combination of the small basis set by Zuber and Hug with an accurate force field represents the best compromise between computational accuracy and computational efficiency.     

Microgels and ionic associations in solutions of cellulose diacetate

Solutions of cellulose diacetate (CDA) from two sources (cotton linters and wood pulp Floranier) were analysed in various solvents by size exclusion chromatography (SEC). Without special precautions, the SEC chromatograms presented three peaks — or prehumps — before the main polymer peak. The first prehump which could be eliminated by ultracentrifugation corresponded to microgels whose sugar composition was determined. These microgels were also investigated by electron microscopy, X-ray and electron diffraction analysis. They corresponded mainly to cellulose triacetate (CTA-II) in the case of CDA from cotton linters and a mixture of CTA-II and xylan diacetate (XDA) in the case of CDA from the wood pulp Floranier. The second and third prehumps could be attributed to ionic effects corresponding to the association of remaining sulfate groups on the CDA molecules with residual calcium. It was found that these ionic effects could be eliminated by the addition of LiBr or LiCl to the elution solvents. This led to chromatograms devoid of prehumps.Presented in part at the Cellulose '91 meeting in New Orleans.     

New dehydration in the pyrrolo[1,2–6-b]isoquinoline series. Preparation and structural identification of 3,5-dihydrobenz[f]indolizin-3-one

3,5-Dihydrobenz[f]indolizin-3-one was prepared by a novel dehydration reaction involving the heating of 1,2,3,5,10,10a-hexahydro[f]indolizine-3,10-dione with polyphosphoric acid. The structure of this new compound was established by X-ray crystallography, by nmr spectroscopy and by reduction to the known products 1,2,3,5-tetrahydrobenz[f]indolizin-3-one and 1,2,3,5,10,10a-hexahydrobenz[f]indolizin-3-one.     

Catalytic (3 + 2) annulation of donor–acceptor aminocyclopropane monoesters and indoles

The efficient catalytic activation of donor–acceptor aminocyclopropanes lacking the commonly used diester acceptor is reported here in a (3 + 2) dearomative annulation with indoles. Bench-stable tosyl-protected aminocyclopropyl esters were converted into cycloadducts in 46–95% yields and up to 95 : 5 diastereomeric ratio using catalytic amounts of triethylsilyl triflimide. Tricyclic indoline frameworks containing four stereogenic centers including all-carbon quaternary centers were obtained.

A catalytic dearomatization of indoles with D–A aminocyclopropane monoesters for the synthesis of highly substituted indolines.     

Digests or extracts?—Some interesting but conflicting results for three widely differing polluted sediment samples

Three sets of samples have been investigated in some detail. One set is from a river polluted by mine workings, containing substantial levels of Fe, Mn,Cu, Zn and Ni with traces of many other metals. The second set consists of typical estuarine sediments contaminated from a wide range of industrial sources, and the third set consists of oily drilling cuttings from the sea bottom in the vicinity of a North Sea oil production platform.These samples have been subjected to treatment 1) with EDTA at two different pH's (extracts) 2) with HNO₃/H₂O₂ 3) with HNO₃/HCl and 4) with HNO₃/HCl/HF (digests). EDTA recoveries, compared toaqua regia digests, are often very reproducible, not dependent on pH, and usually significantly low. Nitric/peroxide andaqua regia digests often give very close results suggesting that these are meaningful values indicating the maximum levels of polluting metals in the sediments. However, the triple acid digest with HF does sometimes give higher values (and reasonable agreement for CRM's such as MESS-1) but with poorer reproducibility.     

Molecular recognition in a uradinyl-functionalized stable radical

Stable radical 2-(6-uradinyl)-4,4,5,5-tetramethyl-4,5-dihydro-1H-imidazole-1-oxyl (1) binds to hydrogen-bonding complement 2,6-di(propylamido)pyridine (DAP) in chloroform with Ka=220 M(-1) at 33 degrees C; ESI-MS shows not only 1:DAP complementary dyad formation, but also 1:(DAP)2 formation at higher concentrations of DAP.     

Vaporisation et dissociation thermique des sulfures de phosphore P4S3, P4S7 et P4S10 a l'etat gazeux

Résumé Nous avons montré par spectrométrie Raman à chaud et mesure des tensions de vapeur que P₄S₃ se vaporise de façon congruente tandis que P₄S₇ et P₄S₁₀ se dissocient dès le début de leur vaporisation. P₄S₇ donne réversiblement P₄S₃ et soufre. P₄S₁₀ se dissocie irréversiblement en P₄S₇ et soufre. A l'état de vapeur non saturante, P₄S₃ se dissocie au-dessus de 600° avec formation de phosphore, de soufre et d'autres espèces non identifiées.Nous avons mesuré expérimentalement la capacité calorifique de P₄S₃ liquide, calculé celle de P₄S₃ gazeux et son entropie standard. Nous avons aussi estimé l'enthalpie standard de vaporisation de P₄S₃ à l'aide des mesures des tensions de vapeur saturante. Nous en avons déduit l'entropie standard de P₄S₃ liquide et son point d'ébullition.

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It is shown by Raman spectroscopy at high temperature and by vapor tensimetric measurements that the vaporisation of P₄S₃ is congruent, whereas P₄S₇ and P₄S₁₀ dissociate at the beginning of vaporisation. P₄S₇ gives P₄S₃ and sulfur reversibly. The dissociation of P₄S₁₀ into P₄S₇ and sulfur is irreversible. Above 600°, in non-saturated vapour the dissociation of P₄S₃ gives phosphorus, sulfur and some unidentified gaseous species. The heat capacity of liquid P₄S₃ has been measured. That of gaseous P₄S₃ and its standard entropy have been calculated. The vaporisation standard enthalpy of P₄S₃ has been estimated from the experimental results on the saturated vapour pressures. The standard entropy of liquid P₄S₃ and its boiling point have been derived from these data.

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Zusammenfassung Mittels Raman-Spektrometrie bei erhöhter Temperatur und durch Messung der Dampfdrucke wurde festgestellt, daß sich P₄S₃ verflüchtigt, während P₄S₇ und P₄S₁₀ mit Beginn der Verflüchtigung dissoziieren. P₄S₇ ergibt reversibel P₄S₃ und Schwefel. Im Zustand ungesättigten Dampfes dissoziiert P₄S₃ oberhalb von 600° unter Bildung von Phosphor, Schwefel und anderer nicht identifizierter Substanzen.Die Wärmekapazität von flüssigem P₄S₃ wurde gemessen, während die vom gasförmigem P₄S₃ sowie seine Standard-Entropie berechnet wurden. Die Standard-Enthalpie der Verflüchtigung des P₄S₃ wurde durch Messungen der Sättigungs-Dampfdrucke ermittelt. Daraus wurden die Standard-Entropie des flüssigen P₄S₃ sowie sein Siedepunkt berechnet.

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- - , P₄S₃ , P₄S₇ P₄S₁₀ . P₄S₇ P₄S₃ , P₄S₁₀ P₄S₇ . 600° P₄S₃ , . P₄S₃, P₄S₃ . P₄S₃. P₄S₃ .

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Nous remercions Monsieur Letoffe du laboratoire du Professeur J. Bousquet, INSA de Lyon, 20 Avenue Albert Einstein 401, 69621 Villeurbanne, qui a r6alis6 pour nous les déterminations expérimentales des capacités calorifiques de P₄S₈ liquide.