Electron spin resonance studies of spin-labelled polymers—18: Adsorption of spin-labelled poly(vinyl acetate) on silica surfaces

The adsorption of spin-labelled poly(vinyl acetate) from dilute solutions in ethyl acetate, chloroform and toluene onto three silica adsorbents of different surface silanol contents was studied. The adsorption capacities of the three silica samples, which decreased with decreasing surface silanol content, were dependent on the nature of the solvent, being greatest in the poor solvent toluene and least in the good solvent ethyl acetate. The ESR spectra of the polymer adsorbed on the silica of highest silanol content suggested that the polymer had a relatively flat conformation when toluene or chloroform was solvent and a more looped conformation when ethyl acetate was solvent. With the silica of intermediate silanol content, the polymer adsorbed from chloroform solution also had a loopy conformation. The silica of lowest silanol content was prepared by treating the first silica absorbent with trimethylchlorosilane. The line-shapes in the ESR spectrum of the labelled polymer adsorbed on this modified silica indicated a change in mode of adsorption.     

Coherence spectroscopy in dissipative media: a Liouville space pathway approach

We address the possibility of using coherent control tools to extract useful information about the interaction of a system with a dissipative environment. To that end we extend previous work, which developed a coherence spectroscopy based on two-pathway excitation phase control, from the isolated molecule limit to dense media. Specifically, we explore the properties of the channel phase, an observable of energy-domain two-pathway excitation experiments that was shown in the isolated molecule limit to carry information about the phase properties of the material system. Our analysis is based on the combination of steady state and time-dependent analytical perturbative approaches within the density matrix formalism, complemented by nonperturbative numerical simulations. We find that the channel phase carries significantly richer information in the presence of decoherence mechanisms than in their absence. In particular, rescattering events in the structured continuum introduce new features in the channel phase spectrum, whose structure conveys information about both the molecular continuum and the system bath interaction.     

Poly(amideimide)s containing pendant pentadecyl chains: Synthesis and characterization

A new aromatic diacylhydrazide monomer viz., 4-[4′-(hydrazinocarbonyl)phenoxy]-2- pentadecylbenzohydrazide was synthesized starting from cardanol, which in turn is obtainable from cashew nut shell liquid - a renewable resource material. A series of new poly(amideimide)s containing flexibilizing ether linkages and pendant pentadecyl chains was synthesized from 4-[4′-(hydrazinocarbonyl)phenoxy]-2-pentadecylbenzohydrazide and commercially available aromatic dianhydrides, viz., benzene-1,2,4,5-tetracarboxylic dianhydride, 3,3′,4,4′-biphenyltetracarboxylic dianhydride, benzophenone-3,3′,4,4′-tetracarboxylic dianhydride, 4,4′-oxydiphthalic anhydride and 4,4′-(hexafluoro isopropylidene)diphthalic anhydride by a two-step solution polycondensation in N,N-dimethylacetamide via the poly(hydrazide acid) intermediate. Inherent viscosities of poly(amideimide)s were in the range 0.60-0.64 dL/g in N,N-dimethylacetamide at 30 ± 0.1 °C. Poly(amideimide)s could be solution cast into tough, transparent and flexible films from their N,N-dimethylacetamide solutions. The solubility of poly(amideimide)s was significantly improved by incorporation of pendant pentadecyl chains and were found to be soluble in N,N-dimethylacetamide, 1-methyl-2-pyrrolidinone, pyridine and m-cresol at room temperature or upon heating. Wide angle X-ray diffraction patterns of poly(amideimide)s revealed a broad halo at around 2θ = ∼19° suggesting that polymers were amorphous in nature. In the small-angle region, diffuse to sharp reflections of a typically layered structure resulting from the packing of pentadecyl side chains were observed. The temperature at 10% weight loss (T₁₀), determined by TGA in nitrogen atmosphere, of poly(amideimide)s was in the range of 388-410 °C indicating their good thermal stability. Glass transition temperatures of poly(amideimide)s were in the range 162-198 °C. It was observed that the plasticization effect of attached pentadecyl side chains induced the depression of T_g.     

A truncated Newton minimizer adapted for CHARMM and biomolecular applications

We report the adaptation of the truncated Newton minimization package TNPACK for CHARMM and biomolecular energy minimization. TNPACK is based on the preconditioned linear conjugate–gradient technique for solving the Newton equations. The structure of the problem—sparsity of the Hessian—is exploited for preconditioning. Experience with the new version of TNPACK is presented on a series of molecular systems of biological and numerical interest: alanine dipeptide (N-methyl-alanyl-acetamide), a dimer of N-methyl-acetamide, deca-alanine, mellitin (26 residues), avian pancreatic polypeptide (36 residues), rubredoxin (52 residues), bovine pancreatic trypsin inhibitor (58 residues), a dimer of insulin (99 residues), and lysozyme (130 residues). Detailed comparisons among the minimization algorithms available in CHARMM, particularly those used for large-scale problems, are presented along with new mathematical developments in TNPACK. The new TNPACK version performs significantly better than ABNR, the most competitive minimizer in CHARMM, for all systems tested in terms of CPU time when curvature information (Hessian/vector product) is calculated by a finite-difference of gradients (the numeric option of TNPACK). The remaining derivative quantities are, however, evaluated analytically in TNPACK. The CPU gain is 50% or more (speedup factors of 1.5 to 2.5) for the largest molecular systems tested and even greater for smaller systems (CPU factors of 1 to 4 for small systems and 1 to 5 for medium systems). TNPACK uses curvature information to escape from undesired configurational regions and to ensure the identification of true local minima. It converges rapidly once a convex region is reached and achieves very low final gradient norms, such as of order 10^?8, with little additional work. Even greater overall CPU gains are expected for large-scale minimization problems by making the architectures of CHARMM and TNPACK more compatible with respect to the second-derivative calculations. © 1994 by John Wiley & Sons, Inc.     

Noncovalent synthesis in aqueous solution and spectroscopic characterization of multi-porphyrin complexes

The interactions of the tetracationic meso-tetrakis(N-methyl-4-pyridyl)porphyrin (H(2)TMPyP) and its metallo derivatives (MTMPyP) (where M=copper(II), zinc(II), and gold(III) with the octa-anionic form (at neutral pH) of 5,11,17,23-tetrasulfonato-25,26,27,28-tetrakis(hydroxycarbonylmethoxy)calix[4]arene (C(4)TsTc) lead to a series of complex species whose stoichiometry and porphyrin sequence can be easily tuned. Crystallographic, spectroscopic, and diffusion NMR studies converge towards a common picture in which a central 1:4 porphyrin/calixarene unit serves as a template for the formation of more complex species. These species arise by successive, stepwise addition of single porphyrin molecules above and below the plane of the 1:4 central core to ultimately give a 7:4 complex. Noticeably, the stoichiometry of the various complex species corresponds to the actual concentration ratio of porphyrins and calixarenes in solution allowing the stoichiometry of these species to be easily tuned. This behavior and the remarkable stability of these species allow homo-porphyrin and hetero-(metallo)porphyrin species to be formed with control of not only the stoichiometry but also the sequence of the porphyrin array. The flexibility and ease of this approach permit, in principle, the design and synthesis of porphyrin arrays for predetermined purposes. For example, we have shown that it is very easy to design and obtain mixed porphyrin species in which a foreseen photoinduced electron-transfer is indeed observed.     

Total Synthesis of the Putative Structure of Xylarinol B

The total synthesis of the putative structure of xylarinol B is described and the need to revise its structure is demonstrated. The central benzoxepine skeleton was constructed by employing a cobalt‐mediated bimolecular [2+2+2] Reppe–Vollhardt alkyne cycloaddition reaction.     

ZnO multipods, submicron wires, and spherical structures and their unique field emission behavior

A simple method of vapor deposition for the shape selective synthesis of ZnO structures, namely, multipods, submicron wires, and spheres, has been successfully demonstrated. A plausible growth mechanism based on the studies of scanning electron microscopy (SEM), transmission electron microscopy (TEM), X-ray diffraction (XRD), and X-ray photoelectron spectroscopy (XPS) is proposed. Our studies suggest that the growth of a multipod structure is governed by the screw dislocation propagation while the vapor-liquid-solid (VLS) mechanism is responsible for the formation of submicron wires and spheres. Moreover, the flow rate of the carrier gas plays a crucial role in governing the morphology. Further, these structures exhibit an enhanced field emission behavior. The nonlinearity in the Fowler-Nordheim (F-N) plot, a characteristic feature of electron emission from semiconductors, is explained by considering the contributions from both the conduction and the valence bands of ZnO.