THE 'OPSIN SHIFT' IN BACTERIORHODOPSIN: STUDIES WITH ARTIFICIAL BACTERIORHODOPSINS

Abstract— The difference (in cm⁻¹) in absorption maxima between the protonated Schiff base of retinals and the pigment derived therefrom has been defined as the opsin shift. It represents the influence of the opsin binding site on the chromophore. The analysis of the opsin shifts of a series of dihydrobacteriorhodopsins has led to the external point-charge model, which in addition to a counter anion near the Schiff base ammonium, carries another negative charge in the vicinity of the β-ionone ring. This is in striking contrast to the external point-charge model proposed earlier for the bovine visual pigment. The absorption maxima of rhodopsins formed from bromo- and phenyl retinals support the two models. A retinal carrying a photoaffinity label has yielded a nonbleachable bacteriorhodopsin.     

Enthalpic relaxation of convective desiccated trehalose-water glasses

Minimizing molecular mobility for desiccation preservation of biologics close to ambient temperature using trehalose glasses require quantitative characterization of their enthalpic relaxation at various end water contents. Differential scanning calorimetry (DSC) was used to characterize three different water contents: 0%, 1.5% and 10% over a wide range of aging temperatures. Results showed the characteristic time (τ) varies both with the water content and the aging temperature. τ increased with lowered aging temperature but showed a non-monotonous relationship as a function of water content. Fragility of trehalose glasses was analyzed using thermophysical parameters obtained from relaxation studies. The study showed trehalose to be a fragile glass former at all water contents, with 0% water samples showing a relatively stronger glass. A compromise between molecular mobility and glass fragility led to an optimal water content close to 1.5% and an aging temperature close to room temperature. This would ensure a τ value of 9000 h, which corresponds to a storage period of a year.     

The synthesis and conformational analysis of tetrahydro-1,2,4-oxadiazines

The synthesis and variable temperature ¹H and ¹³C NMR spectra of three tetrahydro-1,2,4-oxadiazines are reported. The N(4)-Me inversion barriers are 6.8–7.0 (ax→ts) and 7.4–7.9 kcal mol^?1 (eq→ts) with ΔG° 0.6–0.9 kcal mol^?1. The N(2)-Me inversion barriers are 10.4–11.4 (ax→ts) and 11.6–13.1 kcal mol^?1 (eq→ts) with ΔGδ 1.2–1.7 kcal mol^?1. The barrier to ring inversion is ca. 12.7 kcal mol^?1. “R value” analysis shows the ring to have a 56.5±2δ dihedral angle about the C(5)-(6) bond, indicative of the expected chair conformation.     

A study on the electronic effect of <Emphasis Type="Italic">para</Emphasis> substituents in the aryloxy ring of the hydrazone ligands on the vanadium centre in a family of mixed-ligand [V<Superscript>V</Superscript>O(ONO)(OO)] complexes

[V^IVO(acac)₂] reacts with the methanolic solutions of tridentate dibasic ONO donor hydrazone ligands derived from the condensation of benzoyl hydrazine with either 2-hydroxyacetophenone (H₂L¹) or its para-substituted derivatives (H₂L^2–4) (general abbreviation H₂L), in the presence of vanillin (Hvan) in equimolar ratio under aerobic conditions generating the mixed-ligand oxovanadium(V) complexes of the type [V^VO(L)(van)], (1)–(4) in good yield. All the complexes are diamagnetic and exhibit only ligand-to-metal charge transfer (l.m.c.t.) band near 510 nm in addition to intra-ligand (π → π*) transition band near 330 nm in CH₂Cl₂ solution. ¹H-n.m.r. spectra of the complexes in CDCl₃ solution indicate the presence of two isomeric forms [(1A), (1B); (2A), (2B); (3A), (3B) and (4A), (4B)] in different ratios, which is explained by the interchange of the two binding sites of van⁻ motif between its coordinated equatorial and axial positions. Complexes display two quasi-reversible one electron reduction peaks near +0.10 V and near +0.30 V versus s.c.e. in CH₂Cl₂ solution which are attributed to the successive reduction of V^V→ V^IV and the V^IV→ V^III motifs, respectively. λ_max (for l.m.c.t. transition), and the two reduction potential values (E _1/2)^I (average of the first step anodic and first step cathodic peak potentials) and (E _1/2)^II (average of the second step anodic and second step cathodic peak potentials) of the complexes, are found to be linearly related to the Hammett constants (σ) of the substituents in the aryloxy ring of the hydrazone ligands. λ_max, (E _1/2)^I and (E _1/2)^II values show large dependence: dλ_max/dσ = 37.29 nm, d(E _1/2)^I/dσ = 0.21 V and d(E _1/2)^II/dσ = 0.21 V, respectively, on σ.     

Synthesis and characterization of styrene grafted carbon nanotube and its polystyrene nanocomposite

Effective side wall functionalization of single-walled carbon nanotube (SWCNT) with 4-vinylaniline was carried out through solvent free functionalization. The functionalized SWCNT was characterized through FT-IR and NMR. Typical peaks to identify the functionalization were observed. Thermal analysis shows around 48% weight loss in functionalized SWCNT in comparison to the pure SWCNT. The ratio of disordered to order transition (I_D/I_G) in FT-Raman, indicated the generation of some surface defects due to functionalization. Near infrared spectrum of functionalized SWCNT also confirmed the functionalization of SWCNT. The polystyrene nanocomposite materials were prepared with functionalized SWCNT as fillers by solution casting from tetrahydrofuran. The functionalized SWCNT nanocomposite showed significant improvement in mechanical properties and electrical properties. The dispersibility of the carbon nanotube in the composite was investigated by using scanning electron microscopy.     

Condensed cyclic and bridged-ring systems : part 12: A novel synthetic route to 4-p-methoxyphenyl-bicyclo[ 2.2.2 ]octan-2-ones and some bicyclo [ 3.2.1 ] octane derivatives by acid-catalyzed intramolecula

The efficacy of a new acid-catalyzed intramolecular C-alkylation has been demonstrated by the synthesis of 1-methyl-4-$\text{p}$-methoxyphenylbicyclo [2.2.2] octan-2-one ($\text{5}$) and 4-$\text{p}$-methoxyphenylbicyclo [2.2.2] octan-2-one ($\text{6}$) from easily accessible starting materials. The carbinol $\text{20}$, derived from $\text{5}$, undergoes facile rearrangement leading to 1-$\text{p}$-methoxyphenyl-4-methyl bicyclo [3.2.1] oct-3-ene ($\text{22}$), which has been transformed to $\text{endo}$-1-$\text{p}$-methoxyphenyl-4-methylbicyclo [3.2.1] octan-3-one ($\text{25}$).