Recent liquid chromatographic-(tandem) mass spectrometric applications in proteomics

Conventional proteomics makes use of two-dimensional gel electrophoresis followed by mass spectrometric analysis of tryptic fragments derived from in-gel digestion of proteins. Although being a very strong technique capable of separating and visualizing hundreds of proteins, 2D-gel electrophoresis has some well-documented disadvantages as well. More recently, liquid chromatographic-(tandem) mass spectrometric techniques have been developed to overcome some of the shortcomings of 2D-gel electrophoresis. In this review we have described several recent applications of liquid chromatography-(tandem) mass spectrometry in the field of proteomics and especially in the field of membrane proteomics, quantitative proteomics and in the analysis of post-translational modifications.     

Photodegradation of a 1,3,4-thiadiazole-urea herbicide. Isolation,characterization, X-ray crystal structure and synthesis of photoproducts

The photodegradation of 1,3-dimethyl-1-(2-(3-fluorobenzylthio)-1,3,4-thiadiazol-5-yl)urea as a thin film and in solution is described. The two photoproducts from thin-film photolysis were characterized by spectral and synthetic methods. The X-ray crystal structure of one of the photoproducts is also reported. The rearrangements were shown to involve an S-to-N benzyl migration, followed by a sulfur-oxygen substitution.     

The graphite furnace and its role in atomic spectroscopy

The diversity of applications of the graphite furnace is extraordinary, encompassing the fields of physics, thermochemistry, spectroscopy and analytical chemistry. In this respect, the graphite furnace has been used on a continuous basis as a research tool for nearly a century. Following its introduction as an atomization source for atomic absorption spectrometry by Lvov in 1959, its role in atomic spectrometry expanded considerably to encompass analytical applications in emision, fluorescence, absorption and mass spectrometry. In addition to its conspicuous use as an atomization source in these areas, it is frequently employed as a vaporizer when used in the format of combined and tandem sources with other instrumentation. The unique physico-chemical micro-environment which can be attained within the graphite furnace has also been used to advantage in a number of investigations, including the determination of gas- and solid-phase diffusion coefficients of high-temperature metal vapours, the heats of sublimation of refractory metals, fundamental optical constants and the measurement of the heats of desorption of adatoms from high-temperature surfaces. The range of such applications remains to be more fully explored. The attractive features of this source, viz., the high atomization/vaporization efficiency, comparatively long atomic vapour residence times, controllable chemical and thermal environment and its ability to handle high dissolved solids content samples (100%) serve to ensure its place in analytical atomic spectroscopy for years to come.     

Determination of total arsenic in serum and packed cellsof patients with renal insufficiency

In order to investigate the arsenic level in serum and packed cells of patients with renal insufficiency, total arsenic (As) concentrations were determined with hydride generation atomic absorption spectrometry (HGAAS) in serum (S) and packed cells (PC) of 31 non-dialyzed patients. The accuracy of the method was tested by the analysis of arsenic in 3 certified reference materials. Patients showed a three-fold increase of arsenic concentrations in serum and a two-fold increase of arsenic in packed cells compared with controls. Patients (n=10) with higher serum creatinine (>2.0 mg/dL), urea (>0.70 g/L) and urinary protein (mean+/-SD: 1.12+/-0.82 g/L) showed higher arsenic concentrations (5.8+/-3.3 microg/L in serum and 18.0+/-16.7 microg/kg in packed cells) compared with those with lower creatinine (<1.6 mg/dL), urea (<0.6 g/L) and urinary protein (mean+/-SD: 0.27+/-0.82 g/L) (n=16, serum arsenic 1.2+/-1.2 microg/L, packed cells arsenic 2.6+/-1.9 microg/kg). The significant differences (both p < 0.001) in S and PC-arsenic levels of patients in group I and II implies a relationship between the arsenic level and the degree of chronic renal insufficiency.     

Simultaneous separation and determination (in serum) of phenytoin and carbamazepine and their deuterated analogues by high-performance liquid chromatography--ultraviolet detection for tracer studies

The use of stable isotope-labeled tracer compounds is the safest and most effective method to perform many steady state pharmacokinetic and drug interaction studies. We describe a method by which the heavily deuterated 2H10 analogues of carbamazepine (2H10 CBZ) and phenytoin (2H10 PHT) can be chromatographically separated by high-performance liquid chromatography from unlabeled CBZ and PHT. All compounds are quantitated against an internal standard (IS) (10,11-dihydrocarbamazepine) and measured using conventional UV detection rather than mass spectrometry. Baseline resolution of extracted serum containing 2H10 CBZ, CBZ, 2H10 PHT, PHT and IS is achieved on a heated (55 degrees C) 25 cm x 4.6 mm BioAnalytical Systems Phase II 5 microns ODS column with an isocratic mobile phase consisting of water-acetonitrile-tetrahydrofuran (80:16:4, v/v/v) at 1.2 ml/min. Eluting compounds were monitored at a UV wavelength of 214 nm. Calculated resolution of 2H10 CBZ from CBZ and of 2H10 PHT from PHT were 1.3. Serum standard curves were linear (R greater than or equal to 0.999) over a range of 0.5-14 micrograms/ml for 2H10 CBZ, 0.5-20 micrograms/ml for CBZ, 0.5-20 micrograms/ml for 2H10 PHT, and 0.5-30 micrograms/ml for PHT. Within-day percent relative standard deviations (precision) were less than 6% in all cases.     

Peroxides of higher aliphatic ethers

The oxidation of higher aliphatic ethers with oxygen at 50° yields two peroxides as the main oxidation products for each ether, namely a dihydroperoxy-dialkyl ether and a dihydroperoxy-dialkyl peroxide. The mass spectra of these compounds are recorded and the main fragmentation pattern is discussed.     

Study of the direct detection of crosslinks in hydrocarbons by 13C-NMR. I. Preparation and characterization of model compound 1,1,2,2-tetra(tridecyl) ethane

The present series of papers is the commencement of a study aimed at the direct detection and quantification of crosslinking in hydrocarbons with the ultimate objective of a precise study of radiation-induced crosslinking in polyethylene. The subject of the present paper is the synthesis of a model compound containing a crosslink in a well-defined position sufficiently remote from the chain ends to be representative of an average crosslink in polyethylene. Such a compound in the form of 1,1,2,2-tetra(tridecyl) ethane has been synthetized and isolated in pure form in the course of the present work. Melting points and x-ray spacings of the new compound have been determined, and a comparison with the corresponding linear paraffins has been made. Effects are noted relating to the influence of molecular shape on the GPC elution volume, in which context an observation on a cyclic paraffin is also quoted.     

On the extraction of mineral acids and uranium from alcoholic and acetonic solutions with tri-N-butyl phosphate

The extraction of hydrochloric, nitric, and sulphuric acids with TBP was studied as a function of methanol, ethanol, isopropanol, and acetone concentration in the aqueous phase. Extraction increases in the order: methanol相似文献   

Acylsilanes from the pyrolysis of silyl esters of α-ketoacids

The pyrolyses of silyl esters of pyruvic acid and phenylglyoxylic acid gave rise to acylsilanes in high yield. An intramolecular rearrangement involving an intermediate siloxycarbene is proposed to account for the reaction.