A highly sensitive detection platform based on surface-enhanced Raman scattering for Escherichia coli enumeration

A very sensitive and highly specific heterogeneous immunoassay system, based on surface-enhanced Raman scattering (SERS) and gold nanoparticles, was developed for the detection of bacteria and other pathogens. Two different types of gold nanoparticles (citrate-stabilized gold nanosphere and hexadecyltrimethylammonium bromide (CTAB)-stabilized gold nanorod particles) were examined and this immunoassay was applied for the detection of Escherichia coli. Raman labels were constructed by using these spherical and rod-shaped gold nanoparticles which were first coated with 5,5′-dithiobis(2-nitrobenzoic acid) (DTNB) and subsequently with a molecular recognizer. The working curve was obtained by plotting the intensity of the SERS signal of the symmetric NO₂ stretching of DTNB at 1,333 cm⁻¹ versus the concentration of the E. coli. The analytical performance of gold particles was evaluated via a sandwich immunoassay, and linear calibration graphs were obtained in the E. coli concentration range of 10¹–10⁵ cfu/mL with a 60-s accumulation time. The sensitivity of the Raman label fabricated with gold nanorods was more than three times higher than spherical gold nanoparticles. The selectivity of the developed sensor was examined with Enterobacter aerogenes and Enterobacter dissolvens, which did not produce any significant response. The usefulness of the developed immunoassay to detect E. coli in real water samples was also demonstrated.     

Radical scavenging and antioxidant activity of tannic acid

Tannic acid, a naturally occurring plant polyphenol, is composed of a central glucose molecule derivatized at its hydroxyl groups with one or more galloyl residues. In the present paper, we examines the in vitro radical scavenging and antioxidant capacity of tannic acid by using different in vitro analytical methodologies such as 1,1-diphenyl-2-picryl-hydrazyl free radical (DPPH) scavenging, 2,2′-azino-bis(3-ethylbenzthiazoline-6-sulfonic acid) (ABTS) radical scavenging activity, total antioxidant activity determination by ferric thiocyanate, total reducing ability determination using by Fe³⁺–Fe²⁺ transformation method, superoxide anion radical scavenging by riboflavin–methionine-illuminate system, hydrogen peroxide scavenging and ferrous ions (Fe²⁺) chelating activities. Also, butylated hydroxyanisole (BHA), butylated hydroxytoluene (BHT), α-tocopherol and trolox, a water-soluble analogue of tocopherol, were used as the reference antioxidant radical scavenger compounds.Tannic acid inhibited 97.7% lipid peroxidation of linoleic acid emulsion at 15 μg/mL concentration. On the other hand, the above mentioned standard antioxidants indicated an inhibition of 92.2%, 99.6%, 84.6% and 95.6% on peroxidation of linoleic acid emulsion at 45 μg/mL concentration, respectively. In addition, tannic acid had an effective DPPH scavenging, ABTS⁺ radical scavenging, superoxide anion radical scavenging, hydrogen peroxide scavenging, Fe³⁺ reducing power and metal chelating on ferrous ions activities. Also, those various antioxidant activities were compared to BHA, BHT, α-tocopherol and trolox as references antioxidant compounds. The present study shows that tannic acid is the effective natural antioxidant component that can be used as food preservative agents or nutraceuticals.     

Numerical simulation of partially coherent broadband optical imaging using the finite-difference time-domain method

Rigorous numerical modeling of optical systems has attracted interest in diverse research areas ranging from biophotonics to photolithography. We report the full-vector electromagnetic numerical simulation of a broadband optical imaging system with partially coherent and unpolarized illumination. The scattering of light from the sample is calculated using the finite-difference time-domain (FDTD) numerical method. Geometrical optics principles are applied to the scattered light to obtain the intensity distribution at the image plane. Multilayered object spaces are also supported by our algorithm. For the first time, numerical FDTD calculations are directly compared to and shown to agree well with broadband experimental microscopy results.     

Exact and explicit solutions to the discrete nonlinear Schrödinger equation with a saturable nonlinearity

We analyze the discrete nonlinear Schrödinger equation with a saturable nonlinearity through the (G^′/G)-expansion method to present some improved results. Three types of analytic solutions with arbitrary parameters are constructed; hyperbolic, trigonometric, and rational which have not been explicitly computed before.     

Schwarzian derivative as a proof of the chaotic behaviour

In recent years, a sufficient condition for determining chaotic behaviours of the non-linear systems has been characterized by the negative Schwarzian derivative (Hac?bekiro?lu et al, Nonlinear Anal.: Real World Appl. 10, 1270 (2009)). In this work, the Schwarzian derivative has been calculated for investigating the quantum chaotic transition points in the high-temperature superconducting frame of reference, which is known as a nonlinear dynamical system that displays some macroscopic quantum effects. In our previous works, two quantum chaotic transition points of the critical transition temperature, T _c, and paramagnetic Meissner transition temperature, T _PME, have been phenomenologically predicted for the mercury-based high-temperature superconductors (Onba?l? et al, Chaos, Solitons and Fractals 42, 1980 (2009); Aslan et al, J. Phys.: Conf. Ser. 153, 012002 (2009); Çataltepe, Superconductor (Sciyo Company, India, 2010)). The T _c, at which the one-dimensional global gauge symmetry is spontaneously broken, refers to the second-order phase transition, whereas the T _PME, at which time reversal symmetry is broken, indicates the change in the direction of orbital current in the system (Onba?l? et al, Chaos, Solitons and Fractals 42, 1980 (2009)). In this context, the chaotic behaviour of the mercury-based high-temperature superconductors has been investigated by means of the Schwarzian derivative of the magnetic moment versus temperature. In all calculations, the Schwarzian derivatives have been found to be negative at both T _c and T _PME which are in agreement with the chaotic behaviour of the system.     

Exact solutions of the Korteweg-de Vries equation with space and time dependent coefficients by the extended unified method

Recently the unified method for finding traveling wave solutions of nonlinear evolution equations was proposed by one of the authors. It was shown that, this method unifies all the methods being used to find these solutions. In this paper, we extend this method to find a class of formal exact solutions to Korteweg-de Vries equation with space-time dependent coefficients.     

Palladium(II)?NHC complexes containing benzimidazole ligand as a catalyst for C?N bond formation

The reaction of 2‐(2‐bromoethyl)‐1,3‐dioxane with 1‐alkylbenzimidazole derivatives results in the formation of the new benzimidazolium salts (1). The reaction of Pd(OAc)₂ with 1,3‐dialkylbenzimidazolium salts (1a–c) yields palladium N‐heterocyclic carbene (NHC) complexes (2a–c). All synthesized compounds were characterized by ¹H NMR, ¹³ C NMR, IR and elemental analysis techniques which support the proposed structures. As catalysts, these new palladium complexes offer a simple and efficient methodology for the synthesis of triarylamines and secondary amines from anilines and amines and in a single step with potassium tertiary butoxide as a base. Copyright © 2010 John Wiley & Sons, Ltd.     

Dynamic compensation temperature in the kinetic spin-1 Ising model in an oscillating external magnetic field on alternate layers of a hexagonal lattice

The dynamic behavior of a two-sublattice spin-1 Ising model with a crystal-field interaction (D) in the presence of a time-varying magnetic field on a hexagonal lattice is studied by using the Glauber-type stochastic dynamics. The lattice is formed by alternate layers of spins σ=1 and S=1. For this spin arrangement, any spin at one lattice site has two nearest-neighbor spins on the same sublattice, and four on the other sublattice. The intersublattice interaction is antiferromagnetic. We employ the Glauber transition rates to construct the mean-field dynamical equations. Firstly, we study time variations of the average magnetizations in order to find the phases in the system, and the temperature dependence of the average magnetizations in a period, which is also called the dynamic magnetizations, to obtain the dynamic phase transition (DPT) points as well as to characterize the nature (continuous and discontinuous) of transitions. Then, the behavior of the total dynamic magnetization as a function of the temperature is investigated to find the types of the compensation behavior. Dynamic phase diagrams are calculated for both DPT points and dynamic compensation effect. Phase diagrams contain the paramagnetic (p) and antiferromagnetic (af) phases, the p+af and nm+p mixed phases, nm is the non-magnetic phase, and the compensation temperature or the L-type behavior that strongly depend on the interaction parameters. For D<2.835 and H₀>3.8275, H₀ is the magnetic field amplitude, the compensation effect does not appear in the system.     

Density Based Problem Space Search for the Capacitated Clustering p-Median Problem

In the Capacitated Clustering Problem (CCP), a given set of n weighted points is to be partitioned into p clusters such that, the total weight of the points in each cluster does not exceed a given cluster capacity. The objective is to find a set of p centers that minimises total scatter of points allocated to them. In this paper a new constructive method, a general framework to improve the performance of greedy constructive heuristics, and a problem space search procedure for the CCP are proposed. The constructive heuristic finds patterns of natural subgrouping in the input data using concept of density of points. Elements of adaptive computation and periodic construction–deconstruction concepts are implemented within the constructive heuristic to develop a general framework for building efficient heuristics. The problem-space search procedure is based on perturbations of input data for which a controlled perturbation strategy, intensification and diversification strategies are developed. The implemented algorithms are compared with existing methods on a standard set of bench-marks and on new sets of large-sized instances. The results illustrate the strengths of our algorithms in terms of solution quality and computational efficiency.