Opening Enediyne Scissors Wider: pH‐Dependent DNA Photocleavage by meta‐Diyne Lysine Conjugates

Photochemical activation of meta‐diynes incapable of Bergman and C1–C5 cyclizations still leads to efficient double‐strand DNA cleavage. Spatial proximity of the two arylethynyl groups is not required for efficient DNA photocleavage by the enediyne‐lysine conjugates. Efficiency of the cleavage is a function of the external pH and DNA damage is strongly enhanced at pH < 7. The pH‐dependence of the DNA photocleavage activity stems from the protonation states of lysine amino groups, the internal electron donors responsible for intramolecular PET quenching and deactivation of the photoreactive excited states. DNA‐binding analysis suggests intercalative DNA binding for phenyl substituted conjugate and groove binding for TFP‐substituted conjugate. Additional insights in the possible mechanism for DNA damage from the ROS (Reactive Oxygen Species) scavenger experiments found that generation of singlet oxygen is partially involved in the DNA damage.     

Poly(HEMA-co-AA) microparticles for removal of aluminum: The reason for Alzheimer's

Aluminum is one of the most toxic metals causing a variety of neurologic diseases, especially Alzheimer's disease. It is impossible to avoid contact with aluminum because of its existence in food to medications. Therefore, removal of aluminum from the blood or wastewater is urgently important. The cost-effective and easy-to-prepare adsorbents are needed to get efficient aluminum removal. For that purpose, the poly(2-hydroxyethylmethacrylate-co-acrylic acid), poly(HEMA-co-AA), microparticles was synthesized to remove aluminum in a very short interaction time. The achievement of the desired polymeric structure was confirmed via Fourier transform infrared spectroscopy (FTIR), scanning electron microscope (SEM) and transmission electron microscope (TEM), etc. Additionally, particle features such as swelling ratio, size, and surface area were determined. The microparticles synthesized in this study have been determined with very good adsorption capacity even in small aluminum concentrations.     

An ILP and simulation model to optimize search and rescue helicopter operations

Maritime search and rescue (SAR) operations, conducted for rendering aid to the victims in need of help at sea, play a crucial role in dropping the number of causalities. Therefore, it is of high importance to organize SAR operations properly. In this paper, we compose a hybrid methodology which combines optimization and simulation to allocate SAR helicopters. First, we build an integer linear programming (ILP) model to provide an effective deployment plan and use it as an input to a simulation model which includes constraints that the ILP model cannot tackle. Next, using a rule-based algorithm, we generate alternative solutions and seek better plans that exist in the vicinity of the ILP model solution. We perform our methodology on the historical incident data in the Aegean Sea region. Results show that the hybrid methodology we adopted leads to a more effective utilization of resources than the optimization model alone.     

Effects of timber skidding on chemical characteristics of herbaceous cover, forest floor and topsoil on skidroad in an oak (Quercus petrea L.) forest

This paper examines the effects of timber harvesting by skidding on some soil properties (sand, silt, clay, pH, organic carbon, bulk density and compaction), herbaceous cover (unit mass) and forest floor (unit weight) properties. Also N (%), P, K, Na, Ca, Mg, Fe, Zn, Cu and Mn (ppm) were determined in all herbaceous cover, forest floor and two soil depth (0–5 cm and 5–10 cm) on skidroad of an oak (Quercus petrea L.) stand in Istanbul Belgrad Forest – Turkey. In this study, obtained results are; the forest floor and the herbaceous cover amount on the skidroad have been found considerably lower than undisturbed area. There were some crucial changes in the characteristics of the soil which has been investigated down to 10 cm depth. Soil bulk density was found quite high in the samples taken from the skidroad subject to compaction compared to the ones on the undisturbed area. Nevertheless, no important difference had been detected between the skidroad and the undisturbed area at both soil depths in terms of organic carbon contents. Moreover, the soil acidity (pH) values showed noteworthy differences in the analysis of soil samples taken from both soil depths on the skidroad and on the undisturbed area. Fe and Cu contents of herbaceous samples on skidroad were significantly higher than undisturbed area. Forest floor on skidroad had significantly higher K content, and significantly lower Zn, Mn and N content compared to undisturbed area. P, Fe, Zn and Mn contents were found significantly lower in 0–5 cm soil depth on skidroad than undisturbed area. In 5–10 cm soil depth, concentrations of N, P, Fe, Zn and Mn were significantly lower, while Mg and Cu contents were significantly higher than undisturbed area. Results indicate that long-term harvest using skidding techniques on these sites had adversely affected soil cation concentrations, physical soil conditions and mass of herbaceous cover and forest floor.     

Uniqueness and the maximum principle for quasilinear elliptic equations with quadratic growth conditions

In this paper, we show that the maximum principle holds for quasilinear elliptic equations with quadratic growth under general structure conditions.Two typical particular cases of our results are the following. On one hand, we prove that the equation (1) {ie77-01} where {ie77-02} and {ie77-03} satisfies the maximum principle for solutions in H ¹()L(), i.e., that two solutions u ₁, u ₂H¹() L() of (1) such that u ₁u₂ on , satisfy u ₁u₂ in . This implies in particular the uniqueness of the solution of (1) in H ₀ ¹ ()L().On the other hand, we prove that the equation (2) {ie77-04} where fH^–1() and g(u)>0, g(0)=0, satisfies the maximum principle for solutions uH¹() such that g(u)¦Du|{²L¹(). Again this implies the uniqueness of the solution of (2) in the class uH ₀ ¹ () with g(u)¦Du|{²L¹().In both cases, the method of proof consists in making a certain change of function u=(v) in equation (1) or (2), and in proving that the transformed equation, which is of the form (3) {ie77-05}satisfies a certain structure condition, which using ((v₁ -v ₂)⁺)ⁿ for some n>0 as a test function, allows us to prove the maximum principle.     

Stereochemistry and reactivity of F- and H-vinyldiazocarbonyl compounds and their phosphazines: synthesis of pyrazoles and pyridazines

3-(Trifluoromethyl)-substituted (F) 2-vinyl-2-diazocarbonyl compounds, having cis-relationship of functional groups (AlkO₂C, CN₂), do not undergo 1,5-electrocyclization, but readily take part in the tandem Staudinger-diaza-Wittig reactions to produce trifluoromethyl-substituted pyridazines, whereas their non-fluorinated analogs (H), with trans-configuration, easily cyclize to pyrazoles, but remain intact under Staudinger-diaza-Wittig reaction conditions. The difference in the reactivity of H- and F-vinyldiazoketones, vinyldiazoacetates, and derived phosphazines is apparently caused by the different stereochemical arrangements of the AlkO₂C and CN₂ groups.     

Ruthenium complexes of aminophosphine ligands and their use as pre-catalysts in the transfer hydrogenation of aromatic ketones: X-ray crystal structure of thiophene-2-(N-diphenylthiophosphino)methylamine

Reaction of thiophene-2-methylamine with one or two equivalents of PPh₂Cl in the presence of NEt₃, proceeds in thf to give thiophene-2-(N-diphenylphosphino)methylamine, 1a and thiophene-2-(N,N-bis(diphenylphosphino))methylamine, 2a respectively, under anaerobic conditions. Oxidations of 1a and 2a with aqueous hydrogen peroxide, elemental sulfur or gray selenium in thf gives the corresponding oxides, sulfides and selenides [Ph₂P(E)NHCH₂-C₄H₃S] (E: O 1b, S 1c, Se 1d) and [(Ph₂P(E))₂NCH₂-C₄H₃S], (E: O 2b, S 2c, Se 2d) respectively, in high yield. Furthermore, two novel Ru(II) complexes with the P-N ligands 1a and 2a were synthesized starting with the complex [Ru(η⁶-p-cymene)(μ-Cl)Cl]₂. The complexes were fully characterized by analytical and spectroscopic methods. ³¹P-{¹H} NMR, DEPT, ¹H-¹³C HETCOR or ¹H-¹H COSY correlation experiments were used to confirm the spectral assignments. The molecular structure of thiophene-2-(N-diphenylthiophosphino)methylamine was also elucidated by single-crystal X-ray crystallography. Following activation by NaOH, compounds 3 and 4 catalyze the transfer hydrogenation of acetophenone derivatives to 1-phenylethanol derivatives in the presence of iso-PrOH as the hydrogen source. [Ru(Ph₂PNHCH₂-C₄H₃S)(η⁶-p-cymene)Cl₂], 3 and [Ru((PPh₂)₂NCH₂-C₄H₃S)(η⁶-p-cymene)Cl]Cl, 4 complexes are suitable catalyst precursors for the transfer hydrogenation of acetophenone derivatives in 0.1 M iso-PrOH solution. Notably 4 acts as an excellent catalyst giving the corresponding alcohols in excellent conversions up to 99% (TOF ? 744 h⁻¹). This transfer hydrogenation is characterized by low reversibility under the experimental conditions.     

Spectral measurements of inductively coupled and helicon discharge modes of a laboratory argon plasma source

An experimental study was conducted to investigate the effects of several operational parameters in the emission spectra, in the 400-850 nm wavelength region, of a laboratory Argon plasma source. In particular, the emission spectra of the inductively coupled plasma and the Helicon plasma modes of operation were compared. Comparisons of spectra point to a significant increase in the ionization fraction of the plasma for the Helicon mode of operation. The spectral measurements allow one to determine the major trends in the plasma electron density for various parameters such as power delivered to the helical antenna, propellant mass flow rate, and applied external magnetic field intensity.Analysis of a prominent Argon single ion line, at 434.8 nm, points out that the plasma electron density increases linearly with the power delivered to the helical antenna, and that there is an optimum propellant mass flow rate for maximum ionization fraction. Additional analysis of the same line shows that above a minimum applied axial magnetic field intensity, the variation in the magnetic field strength has little effect on the plasma electron density.     

Monosize microbeads for pseudo-affinity adsorption of human insulin

Affinity adsorption technique is increasingly used for protein purification, separation and other biochemical applications. Therapeutic molecules such as antibodies, cytokines, therapeutic DNA and plasma proteins must be purified before characterization and utilization. The aim of this study was to prepare micronsized spherical polymeric beads and to investigate the extent of their human insulin adsorption capability. Monosize poly(ethylene glycol dimethacrylate-N-methacryloyl-(L)-histidine) [poly(EDMA-MAH)] beads were prepared by modified suspension copolymerization. Functional monomer (MAH) was synthesized using methacryloyl chloride and L-histidine. The beads were characterized using scanning electron microscopy (SEM), Fourier transform infrared spectroscopy, swelling test and elemental analysis. MAH incorporation into monosize polymeric beads, having an average size around 2-3 μm, was estimated as 55.3 μmol MAH/g bead. Equilibrium swelling ratios of poly(EDMA-MAH) and poly(EDMA) beads were 65% and 55%, respectively. Adsorption experiments were performed under different conditions (i.e., pH, temperature, protein concentration and ionic strength). It was found that adsorption characteristics are strongly depend on these conditions. Maximum insulin adsorption capacity was achieved as 24.7 mg insulin/g poly(EDMA-MAH) beads. Results were well fitted to the Langmuir isotherm model. Compared with poly(EDMA-MAH), nonspecific insulin adsorption onto poly(EDMA) beads was very low (0.61 mg insulin/g bead) and can be negligible. It was observed that insulin could be repeatedly adsorbed and desorbed (at least 10 times) without significant loss in adsorption capacity.