Thiolate-bridged heterometallic complexes of manganese and platinum: Synthesis and molecular structures of (CO)4Mn(μ-SPh)Pt(PPh3)2, (CO)3(PPh3)Mn(μ-SPh)Pt(PPh3)(CO), and (CO)3Mn(μ-SPh)Pt(PPh3)(Dppm)

A reaction of the dimer [Mn(CO)₄(SPh)]₂ with (PPh₃)₂Pt(C₂Ph₂) gave the heterometallic complex (CO)₄Mn(μ-SPh)Pt(PPh₃)₂ (I) and its isomer (CO)₃(PPh₃)Mn(μ-SPh)Pt(PPh₃)(CO) (II). A reaction of complex I with a diphosphine ligand (Dppm) yielded the heterometallic complex (CO)₃Mn(μ-SPh)Pt(PPh₃)(Dppm) (III). Complexes I–III were characterized by X-ray diffraction. In complex I, the single Mn-Pt bond (2.6946(3) ?) is supplemented with a thiolate bridge with the shortened Pt-S and Mn-S bonds (2.3129(5) and 2.2900(6) ?, respectively). Unlike complex I, in complex II, one phosphine group at the Pt atom is exchanged for one CO group at the Mn atom. The Mn-Pt bond (2.633(1) ?) and the thiolate bridge (Pt-S, 2.332(2) ?; Mn-S, 2.291(2) ?) are retained. In complex III, the Mn-Pt bond (2.623(1) ?) is supplemented with thiolate (Pt-S, 2.341(2) ?; Mn-S, 2.292(2) 0?) and Dppm bridges (Pt-P, 2.240(1)?; Mn-P, 2.245(2) ?). Apparently, the Pt atom in complexes I–III is attached to the formally double bond , as in Pt complexes with olefins.     

Separation-based approach to study dissociation kinetics of noncovalent DNA-multiple protein complexes

Noncovalent binding of DNA with multiple proteins is pivotal to many regulatory cellular processes. Due to the lack of experimental approaches, the kinetics of assembly and disassembly of DNA-multiple proteins complexes have never been studied. Here, we report on a first method capable of measuring disassembly kinetics of such complexes. The method is based on continuous spatial separation of different complexes. The kinetics of multiple complex dissociation processes are also spatially separated, which in turn facilitates finding their rate constants. Our separation-based approach was compared with a conventional no-separation approach by using computer simulation of dissociation kinetics. It proved to be much more accurate than the no-separation approach and to be a powerful tool for testing hypothetical mechanisms of the disassembly of DNA-multiple proteins complexes. An experimental implementation of the separation-based approach was finally demonstrated by using capillary electrophoresis as a separation method. The interaction between an 80 nucleotide long single-stranded DNA and single-stranded DNA binding protein was studied. DNA-protein complexes with one and two proteins were observed, and rate constants of their dissociation were determined. We foresee that a separation approach will be also developed to study the kinetics of the formation of DNA-multiple protein complexes.     

Electronic structure of the two isomers of the anionic form of p-coumaric acid chromophore

A theoretical study of the electronic structure of the photoactive yellow protein (PYP) model chromophore, para-coumaric acid (p-CA), is presented. Electronically excited states of the phenolate and carboxylate isomers of the deprotonated p-CA are characterized by high-level ab initio methods including state-specific and multistate multireference pertrubation theory (SS-CASPT2, and MS-CASPT2), equation-of-motion coupled-cluster methods with single and double substitutions (EOM-CCSD) and with an approximate account of triple excitations (CC3). We found that the two isomers have distinctly different patterns of ionization and excitation energies. Their excitation energies differ by more than 1 eV, in contradiction to the experimental report [Rocha-Rinza et al., J. Phys. Chem. A 113, 9442 (2009)]. The calculations confirm metastable (autoionizing) character of the valence excited states of both phenolate and carboxylate isomers of p-CA(-) in the gas phase. The type of resonance is different in the two forms. In the phenolate, the excited state lies above the detachment continuum (a shape resonance), whereas in the carboxylate the excited π→π(*) state lies below the π-orbital ionization continuum, but is above the states derived from ionization from three other orbitals (Feshbach resonance). The computed oscillator strength of the bright electronic state in the phenolate is higher than in the carboxylate, in agreement with Hu?ckel's model predictions. The analysis of photofragmentation channels shows that the most probable products for the methylated derivatives of the phenolate and carboxylate forms of p-CA(-) are CH(3), CH(2)O and CH(3), CH(2)O, CO(2), respectively, thus suggesting an experimental probe that may discriminate between the two isomers.     

Effect of electrosynthesis conditions on the electrochemical and spectral characteristics of copolymers of pyrrole and 3-phenylthiophene

Copolymers of pyrrole and 3-phenylthiophene were obtained by electrochemical polymerization. These copolymers were identified by IR and electronic spectroscopy. The composition, electrochemical properties, and spectral indices of the copolymers depend on the potential for deposition from the monomer mixture and the ratio of pyrrole to 3-phenylthiophene.Translated from Teoreticheskaya i Éksperimental'naya Khimiya, Vol. 29, No. 2, pp. 159–164, March–April, 1993.The authors express their gratitude Academician V. D. Pokhodenko of the Academy of Sciences of Ukraine for his advice and comments in a discussion of this work.     

Dyson orbitals for ionization from the ground and electronically excited states within equation-of-motion coupled-cluster formalism: theory, implementation, and examples

Implementation of Dyson orbitals for coupled-cluster and equation-of-motion coupled-cluster wave functions with single and double substitutions is described and demonstrated by examples. Both ionizations from the ground and electronically excited states are considered. Dyson orbitals are necessary for calculating electronic factors of angular distributions of photoelectrons, Compton profiles, electron momentum spectra, etc, and can be interpreted as states of the leaving electron. Formally, Dyson orbitals represent the overlap between an initial N-electron wave function and the N-1 electron wave function of the corresponding ionized system. For the ground state ionization, Dyson orbitals are often similar to the corresponding Hartree-Fock molecular orbitals (MOs); however, for ionization from electronically excited states Dyson orbitals include contributions from several MOs and their shapes are more complex. The theory is applied to calculating the Dyson orbitals for ionization of formaldehyde from the ground and electronically excited states. Partial-wave analysis is employed to compute the probabilities to find the ejected electron in different angular momentum states using the freestanding and Coulomb wave representations of the ionized electron. Rydberg states are shown to yield higher angular momentum electrons, as compared to valence states of the same symmetry. Likewise, faster photoelectrons are most likely to have higher angular momentum.     

Gas phase kinetic and theoretical studies of reactions of germylenes and dimethylstannylene

The results of time resolved gas phase studies of labile germylenes (GeH₂ and GeMe₂) and dimethylstannylene (SnMe₂) reactions reported to date are considered together with data of quantum-chemical investigations of the potential energy surfaces of these systems. Reaction mechanisms are discussed. A comparison of reactivity in the series of carbene analogs, ER₂ (E = Si, Ge, Sn, R = H, Me), is made.__________Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 3, pp. 477–505, March, 2005.     

Sorption of petrochemicals from aqueous solutions on thermally activated schungite rock

Thermal oxidative treatment enhances the activity of a schungite rock in the sorption of petrochemicals from aqueous solutions. The effect of the thermal oxidative activation on the content and distribution of carbon in the rock and the dependence of the sorption activity on the texture of sorbents were studied. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 10, pp. 2233–2238, October, 2005.     

Determination of Inorganic Fluorine in High-Purity Silane

A method was proposed for determining inorganic fluorine in high-purity silane. The method is based on the hydrolytic extraction of fluorine as fluorides to the aqueous phase, followed by the analysis of the extract by ion chromatography with a conductometric detector. The detection limit for inorganic fluorine was 1 × 10^–5mass %.     

The group Hom(<Emphasis Type="Italic">A,B</Emphasis>) as an Artinian E(<Emphasis Type="Italic">B</Emphasis>)-or E(<Emphasis Type="Italic">A</Emphasis>)-module

The conditions of Artinianity of the homomorphism group Hom(A, B) as a module over the endomorphism ring of the Abelian group B or A are found. __________ Translated from Fundamentalnaya i Prikladnaya Matematika, Vol. 13, No. 3, pp. 81–96, 2007.     

A raman scattering study of the phase transition in the ammonium oxyfluoride (NH4)3TiOF5

Raman spectra of a polycrystalline sample of the perovskite-like oxyfluoride (NH₄)₃TiOF₅ are measured in the frequency region 100–3600 cm^?1 at temperatures ranging from 91 to 370 K under hydrostatic pressures of up to 9 GPa, which include the range of the phase transition from the orientationally disordered cubic phase to the low-symmetry phase. Anomalies in the spectral parameters due to the phase transition are revealed in the range of vibrations of TiOF₅ octahedral groups.