Isomerization of hydrocarbon ions. VIII—The electron impact induced decomposition of n-dodecane

The literature on the mass spectrometry of ²H and ¹³C labelled higher alkanes is reviewed and the decomposition behaviour of both the molecular and the fragment ions of n-dodecane, n-dodecane-1, 12-[¹³C₂] and n-dodecane-1,1,1,12,12,12-[²H₆] studied with special emphasis on metastable decompositions. It is shown that the elimination of alkane molecules and alkyl radicals from the n-dodecane molecular ion occurs primarily by simple splitting of the C? C bond. In addition, both small alkane molecule and alkyl radicals are eliminated with low probability from centreal parts of the molecular ion. The alkane elimination is less specific than the alkyl elimination. The methyl elimination shows an exceptionally high non-specificity, but is of negligible abundance in the 70 e V electron impact spectrum. The metastable ion spectra suggest, but do not prove unambiguously, that those small alkyl ions (with up to four carbon atoms) originating directly from the molecular ion, may be formed both by direct cleavage of the terminal groups and from central parts of the molecular ion. However, the majority of the small alkyl fragment ions in the 70 eV spectrum are formed by secondary decomposition explaining their apparent non-specific formation. The strikingly different fragmentation behaviour of even electron, [C_nH_2n+1]⁺, and odd electron fragment ions, results from differences in the product stabilities. Using collisional activation and metastable ion spectra it is shown that the odd electron fragments have the structure of the linear alkene (most probably the 1-alkene) molecular ion. In contrast to the molecular ions, alkyl fragment ions decompose with complicated skeletal rearrangements, which lead to substantial, but not complete, carbon randomization. The terminal hydrogen atoms, however, show little scrambling.     

Interaction of mixed-donor macrocycles containing the 1,10-phenanthroline subunit with selected transition and post-transition metal ions: metal ion recognition in competitive liquid-liquid solvent extraction of Cu(II), Zn(II), Pb(II), Cd(II), Ag(I), and Hg(II)

Two new mixed aza-thia crowns 5-aza-2,8-dithia[9]-(2,9)-1,10-phenanthrolinophane (L(4)) and 2,8-diaza-5-thia[9]-(2,9)-1,10-phenanthrolinophane (L(7)) have been synthesized and characterized. The coordination behavior of L(4) and L(7) toward the metal ions Cu(II), Zn(II), Pb(II), Cd(II), Hg(II), and Ag(I) was studied in aqueous solution by potentiometric methods, in CD3CN/D2O 4:1 (v/v) by (1)H NMR titrations and in the solid state. The data obtained were compared with those available for the coordination behavior toward the same metal ions of structurally analogous mixed donor macrocyclic ligands L(1)-L(3), L(5), L(6): all these contain a phenanthroline subunit but have only S/O/N(aromatic) donor groups in the remaining portion of the ring and are, therefore, less water-soluble than L(4) and L(7). The complexes [Cd(NO3)2(L(5))], [Pb(L(7))](ClO4)2 x 1/2MeCN, [Pb(L(4))](ClO4)2 x MeCN, and [Cu(L(7))](ClO4)2 x 3/2MeNO2 were characterized by X-ray crystallography. The efficacy of L(1)-L(7) in competitive liquid-liquid metal ion extraction of Cu(II), Zn(II), Cd(II), Pb(II), Ag(I), and Hg(II) was assessed. In the absence of Hg(II), a clear extraction selectivity for Ag(I) was observed in all systems investigated.     

Molybdenum and tungsten structural differences are dependent on ndz(2)/(n + 1)s mixing: comparisons of (silox)3MX/R (M = Mo, W; silox = (t)Bu3SiO)

Treatment of trans-(Et 2O) 2MoCl 4 with 2 or 3 equiv of Na(silox) (i.e., NaOSi (t) Bu 3) afforded (silox) 3MoCl 2 ( 1-Mo) or (silox) 3MoCl ( 2-Mo). Purification of 2-Mo was accomplished via addition of PMe 3 to precipitate (silox) 3ClMoPMe 3 ( 2-MoPMe 3), followed by thermolysis to remove phosphine. Use of MoCl 3(THF) 3 with various amounts of Na(silox) produced (silox) 2ClMoMoCl(silox) 2 ( 3-Mo). Alkylation of 2-Mo with MeMgBr or EtMgBr afforded (silox) 3MoR (R = Me, 2-MoMe; Et, 2-MoEt). 2-MoEt was also synthesized from C 2H 4 and (silox) 3MoH, which was prepared from 2-Mo and NaBEt 3H. Thermolysis of WCl 6 with HOSi ( t )Bu 3 afforded (silox) 2WCl 4 ( 4-W), and sequential treatment of 4-W with Na/Hg and Na(silox) provided (silox) 3WCl 2 ( 1-W, tbp, X-ray), which was alternatively prepared from trans-(Et 2S) 2WCl 4 and 3 equiv of Tl(silox). Na/Hg reduction of 1-W generated (silox) 3WCl ( 2-W). Alkylation of 2-W with MeMgBr produced (silox) 3WMe ( 2-WMe), which dehydrogenated to (silox) 3WCH ( 6-W) with Delta H (double dagger) = 14.9(9) kcal/mol and Delta S (double dagger) = -26(2) eu. Magnetism and structural studies revealed that 2-Mo and 2-MoEt have triplet ground states (GS) and distorted trigonal monopyramid (tmp) and tmp structures, respectively. In contrast, 2-W and 2-WMe possess squashed-T d (distorted square planar) structures, and the former has a singlet GS. Quantum mechanics/molecular mechanics studies of the S = 0 and S = 1 states for full models of 2-Mo, 2-MoEt, 2-W, and 2-WMe corroborate the experimental findings and are consistent with the greater nd z (2) /( n + 1)s mixing in the third-row transition-metal species being the dominant feature in determining the structural disparity between molybdenum and tungsten.     

Transient innermolecular carbene-hemicarcerand complex of fluorophenylcarbene

Laser flash photolysis of fluorophenyldiazirine incarcerated in hemicarcerand 2 affords incarcerated fluorophenylcarbene [2⊙3], which forms a metastable, innermolecular π-complex with aryl moieties of 2. This carbene complex can be observed spectroscopically. Extensive computational studies provide insights into the structure, spectroscopy, energetics, and kinetics of the 2⊙3 carbene complex.     

Synthesis of bifunctional Au/Pt/Au Core/shell nanoraspberries for in situ SERS monitoring of platinum-catalyzed reactions

The synthesis of bifunctional Au/Pt/Au nanoraspberries for use in quantitative in situ monitoring of platinum-catalyzed reactions by surface-enhanced Raman scattering (SERS) is presented. Highly convolved SERS spectra of reaction mixtures can be decomposed into the contributions of distinct molecular species by multivariate data analysis.     

Synthesis and characterization of (smif)2M(n) (n = 0, M = V, Cr, Mn, Fe, Co, Ni, Ru; n = +1, M = Cr, Mn, Co, Rh, Ir; smif =1,3-di-(2-pyridyl)-2-azaallyl)

A series of Werner complexes featuring the tridentate ligand smif, that is, 1,3-di-(2-pyridyl)-2-azaallyl, have been prepared. Syntheses of (smif)(2)M (1-M; M = Cr, Fe) were accomplished via treatment of M(NSiMe(3))(2)(THF)(n) (M = Cr, n = 2; Fe, n = 1) with 2 equiv of (smif)H (1,3-di-(2-pyridyl)-2-azapropene); ortho-methylated ((o)Mesmif)(2)Fe (2-Fe) and ((o)Me(2)smif)(2)Fe (3-Fe) were similarly prepared. Metatheses of MX(2) variants with 2 equiv of Li(smif) or Na(smif) generated 1-M (M = Cr, Mn, Fe, Co, Ni, Zn, Ru). Metathesis of VCl(3)(THF)(3) with 2 Li(smif) with a reducing equiv of Na/Hg present afforded 1-V, while 2 Na(smif) and IrCl(3)(THF)(3) in the presence of NaBPh(4) gave [(smif)(2)Ir]BPh(4) (1(+)-Ir). Electrochemical experiments led to the oxidation of 1-M (M = Cr, Mn, Co) by AgOTf to produce [(smif)(2)M]OTf (1(+)-M), and treatment of Rh(2)(O(2)CCF(3))(4) with 4 equiv Na(smif) and 2 AgOTf gave 1(+)-Rh. Characterizations by NMR, EPR, and UV-vis spectroscopies, SQUID magnetometry, X-ray crystallography, and DFT calculations are presented. Intraligand (IL) transitions derived from promotion of electrons from the unique CNC(nb) (nonbonding) orbitals of the smif backbone to ligand π*-type orbitals are intense (ε ≈ 10,000-60,000 M(-1)cm(-1)), dominate the UV-visible spectra, and give crystals a metallic-looking appearance. High energy K-edge spectroscopy was used to show that the smif in 1-Cr is redox noninnocent, and its electron configuration is best described as (smif(-))(smif(2-))Cr(III); an unusual S = 1 EPR spectrum (X-band) was obtained for 1-Cr.     

Interactions of multicationic bis(guanidiniocarbonylpyrrole) receptors with double-stranded nucleic acids: syntheses, binding studies, and atomic force microscopy imaging

Compounds 1-3, composed of two guanidiniocarbonylpyrrole moieties linked by oligoamide bridges and differing in number and type of basic groups, were prepared. The sites and degree of protonation of 1-3 depend strongly on the pH value. The interactions of these compounds with several double-stranded (ds) DNA and dsRNA were investigated by means of UV/Vis and CD spectroscopy as well as isothermal titration microcalorimetry (ITC). These studies revealed that the binding of 1-3 to the polynucleotides is driven by three factors, the presence of aliphatic amino groups, the protonation state of the compounds, and the steric properties of the polynucleotide binding site, that is, the shape and structure of their grooves. The results obtained by all applied methods consistently indicated that receptors 1-3 bind to the minor groove of DNA, but, by contrast, to the major groove of RNA. Additionally, it was shown by atomic force microscopy (AFM) imaging that upon interaction of compound 2 with calf thymus (ct) DNA induced aggregation of the DNA occurs, leading to pronounced changes in its secondary structure.     

Total synthesis of (+)-xyloketal D, a secondary metabolite from the mangrove fungus Xylaria sp.

(+)-Xyloketal D was prepared in a one-pot multistep domino reaction by heating optically active 5-hydroxy-4-methyl-3-methylenepentan-2-one (R) in toluene with 2,4-dihydroxyacetophenone. The absolute configuration of the natural product was confirmed by preparation of the starting enone from a lactone of established absolute configuration.     

Even-electron ions: a systematic study of the neutral species lost in the dissociation of quasi-molecular ions

The collision-induced dissociations of the even-electron [M + H](+) and/or [M - H](-) ions of 121 model compounds (mainly small aromatic compounds with one to three functional groups) ionized by electrospray ionization (ESI) or atmospheric pressure chemical ionization (APCI) have been studied using an ion trap instrument, and the results are compared with the literature data. While some functional groups (such as COOH, COOCH(3), SO(3)H in the negative ion mode, or NO(2) in both the positive and negative ion modes) generally promote the loss of neutrals that are characteristic as well as specific, other functional groups (such as COOH in the positive ion mode) give rise to the loss of neutrals that are characteristic, but not specific. Finally, functional groups such as OH and NH(2) in aromatic compounds do not lead to the loss of a neutral that reflects the presence of these substituents. In general, the dissociation of [M + H](+) and [M - H](-) ions generated from aliphatic compounds or compounds containing an aliphatic moiety obeys the even-electron rule (loss of a molecule), but deviations from this rule (loss of a radical) are sometimes observed for aromatic compounds, in particular for nitroaromatic compounds. Thermochemical data and ab initio calculations at the CBS-QB3 level of theory provide an explanation for these exceptions. When comparing the dissociation behaviour of the even-electron [M + H](+) and/or [M - H](-) ions (generated by ESI or APCI) with that of the corresponding odd-electron [M](+) ions (generated by electron ionization, EI), three cases may be distinguished: (1) the dissociation of the two ionic species differs completely; (2) the dissociation involves the loss of a common neutral, yielding product ions differing in mass by one Da, or (3) the dissociations lead to a common product ion.