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131.
Time-dependent density functional theory (TDDFT) calculations of charge-transfer excitation energies omegaCT are significantly in error when the adiabatic local density approximation (ALDA) is employed for the exchange-correlation kernel fxc. We relate the error to the physical meaning of the orbital energy of the Kohn-Sham lowest unoccupied molecular orbital (LUMO). The LUMO orbital energy in Kohn-Sham DFT--in contrast to the Hartree-Fock model--approximates an excited electron, which is correct for excitations in compact molecules. In CT transitions the energy of the LUMO of the acceptor molecule should instead describe an added electron, i.e., approximate the electron affinity. To obtain a contribution that compensates for the difference, a specific divergence of fxc is required in rigorous TDDFT, and a suitable asymptotically correct form of the kernel fxc(asymp) is proposed. The importance of the asymptotic correction of fxc is demonstrated with the calculation of omegaCT(R) for the prototype diatomic system HeBe at various separations R(He-Be). The TDDFT-ALDA curve omegaCT(R) roughly resembles the benchmark ab initio curve omegaCT CISD(R) of a configuration interaction calculation with single and double excitations in the region R=1-1.5 A, where a sizable He-Be interaction exists, but exhibits the wrong behavior omegaCT(R)相似文献   
132.
Rotational effects in the dissociative adsorption of H2 on the Pt211 stepped surface have been studied using classical trajectory calculations on a six-dimensional, density-functional theory potential-energy surface. Reaction of rotating molecules via an indirect trapping mechanism exhibits an unexpected nonmonotonic dependence on the initial rotational quantum number J. Indirect reaction is first quenched with increasing J but is enhanced again for high J initial states. The quenching is attributed to rotational-to-translational energy transfer, which facilitates escape from the chemisorption wells responsible for molecular trapping. For high J, rotational and translational motions decouple, and the energy transfer is no longer possible, which leads again to trapping. Degeneracy-resolved calculations show that for high initial J, molecules rotating in a "cartwheel" fashion (mJ=0) are more likely to become trapped and react indirectly than "helicoptering" molecules (mJ=J). Experimental confirmation of this finding would lend strong support to the existence of the chemisorption wells that trap molecules prior to reaction.  相似文献   
133.
We utilize classical trajectory calculations to study the reaction dynamics of the dissociative adsorption of H2 on the stepped Pt(211) surface. The potential-energy surface has been obtained through an accurate interpolation of density-functional theory data at the generalized gradient approximation level, using the corrugation reduction procedure. New techniques for visualizing the collective dynamics of trajectories are introduced to elucidate the reaction mechanisms involved. Reaction exhibits a nonmonotonic dependence on collision energy, first decreasing with energy, and then increasing. A strong component of direct nonactivated reaction exists at the top edge of the step over the entire range of energies. The inverse relationship between reaction and collision energy at low energies is attributed to trapping in weak chemisorption wells. These wells also influence the direct reaction at the step, leading to a strong asymmetric dependence on incidence angle. Reaction on the terrace is activated, and only contributes significantly at high energies. Agreement with experiments on Pt(533) [A. T. Gee, B. E. Hayden, C. Mormiche, and T. S. Nunney, J. Chem. Phys. 112, 7660 (2000); Surf. Sci. 512, 165 (2002)] is good, and we are able to suggest new interpretations of the experimental data.  相似文献   
134.
We present a theoretical study on the vibrational structure of a circular dichroism (CD) spectrum using time-dependent density-functional theory in combination with a Franck-Condon-type approach. This method is applied to analyze the complex CD spectrum of dimethyloxirane, which involves delicate cancellations of positive and negative CD bands. Our approach reveals that these cancellations are strongly affected by the shapes of the CD bands, and that it is vital for an accurate simulation of the spectrum to take the different envelopes of these bands into account. One crucial point in some former theoretical studies on this compound, which were restricted to vertical excitations, was the appearance of a strong negative CD band in the energy range of 7.0-7.5 eV, which is not present in the experimental spectrum. We can explain the disappearance of this 2B band by a strong vibrational progression along normal modes with C-O stretching character, so that the band extends over an energy range of almost 1.1 eV. Thus, it overlaps with many other (mostly positive) CD bands, leading to a cancellation of its intensity. The dominant vibrational features in the experimental spectrum can be assigned to the 1B, 3B, and 5B bands, which show several clear vibrational peaks and a total bandwidth of only 0.3-0.5 eV. In order to obtain close agreement between the simulated and the experimental spectrum we have to apply small shifts to the vertical excitation energies that enter the calculation. These shifts account both for possible errors in the time-dependent density-functional theory calculations and for the neglect of differential zero-point energy between ground and excited states in our gradient-based vertical Franck-Condon approach.  相似文献   
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137.
We report a study of heavy oil recovery by combined water flooding and electromagnetic (EM) heating at a frequency of 2.45 GHz used in domestic microwave ovens. A mathematical model describing this process was developed. Model equations were solved, and the solution is presented in an integral form for the one-dimensional case. Experiments consisting of water injection into Bentheimer sandstone cores, either fully water saturated or containing a model heavy oil, were also conducted, with and without EM heating. Model prediction was found to be in rather good agreement with experiments. EM energy was efficiently absorbed by water and, under dynamic conditions, was transported deep into the porous medium. The amount of EM energy absorbed increases with water saturation. Oil recovery by water flooding combined with EM heating was up to \(37.0\%\) larger than for cold water flooding. These observations indicate that EM heating induces an overall improvement in the mobility ratio between the displacing water and the displaced heavy oil.  相似文献   
138.
The electronic absorption spectra of the bis(porphyrin) sandwich complexes of the metals Zr, Ce, and Th are studied with time-dependent density functional theory (TDDFT). A ground-state electronic structure analysis reveals that the highest occupied one-electron levels are, as expected, composed of the porphyrin a(1u) and a(2u) highest occupied orbitals (the Gouterman orbitals), but the level pattern is not simply a pair of low-lying nearly degenerate in-phase combinations and a pair of high-lying approximately degenerate antibonding combinations. Instead, the a(1u) split strongly and the a(2u) do not. Since the calculated spectrum agrees very well with experiment, the assignment leaves little doubt that although the experimental spectrum has porphyrin-like features, such as the well-known Q and B bands, the actual composition of the states is rather different from that in porphyrin. In particular the strong mixing of a(1u) --> e(g) and a(2u) --> e(g) is absent, there is mixing with excitations of non-Gouterman type, and, in Ce, ring to metal charge-transfer transitions play an important role. The composition of the states as calculated in this work does not lead to a classification of the excitations as purely "excitonic" or "charge-resonance".  相似文献   
139.
140.
This paper describes the application of two novel screening technologies, i.e. Domain Scan (24- and 30-mer peptides) and Matrix Scan (24-mer peptides) technology, in the mapping of a discontinuous epitope on FSH-beta for a series of 20 monoclonal antibodies. 11 out of 20 mAb's, mapping of which was not successful by conventional Pepscan technology (12-mer peptides), showed selective binding to peptide-constructs corresponding to the beta3-loop of FSH in the Domain and/or Matrix Scan. Systematic replacement analysis studies with peptide-construct 57VYETVRVPGCAC-SAc-ADSLYTYPVATQ81 revealed that for most mAb's the amino acids R62, A70, D71, and L73 form the core of the epitope. A Domain Scan performed in the C-O format showed highly selective binding for mAb's 1 and 2 with only three beta1-beta3 peptide-constructs covering the residues 60TVRVPGCAHHADSLY74 in combination with 10IAIEKEECRFAI21, while for mAb 10 binding was observed with peptide-constructs containing the C-terminal residues 97RGLGPSYCSFGEMKE114 in combination with the residues 10IAIEKEECRFAI21. A Matrix Scan of mAb 17 showed that peptides from four different regions on FSH (1st strand beta3-loop, alpha 1-loop, long alpha2-loop, det. loop) showed enhanced binding in combination with several 70ADSL73-containing peptides. BIACORE measurements with mAb's 1, 2, 13, and 17 using a set of 21 different peptide(-construct)s partially confirmed the Domain and Matrix Scan screening results. Only 24- and 33-mer peptides covering both the 1st and 2nd strand of the beta3-loop showed measurable binding. Cyclic beta3-loop peptide mimics were found to bind significantly stronger (Kd approximately 5 microM) than the lineair analogues, in agreement with the fact that the discontinuous epitope is part of a loop structure. Coupling of the lineair beta1-peptide 1oIAIEKEECRFAI21 to the linear beta3-peptide *52TFKELVYETVRVPGCAHHADSLYTYPVATQAH83# via disulfide bond formation showed a 2-3 fold increase in Kd, thus conforming participation of the beta 1-loop in antibody binding for these mAb's.  相似文献   
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