Fluorescence of Supported Phospholipid Bilayers Recorded in a Conventional Horizontal-Beam Spectrofluorometer

Supported phospholipid bilayers are a convenient model of cellular membranes in studies of membrane biophysics and protein-lipid interactions. Traditionally, supported lipid bilayers are formed on a flat surface of a glass slide to be observed through fluorescence microscopes. This paper describes a method to enable fluorescence detection from the supported lipid bilayers using standard horizontal-beam spectrofluorometers instead of the microscopes. In the proposed approach, the supported lipid bilayers are formed on the inner optical surfaces of the standard fluorescence microcell. To enable observation of the bilayer absorbed on the cell wall, the microcell is placed in a standard fluorometer cell holder and specifically oriented to expose the inner cell walls to both excitation and emission channels with a help of the custom cell adaptor. The signal intensity from supported bilayers doped with 1 % (mol) of rhodamine-labeled lipid in the standard 3-mm optical microcell was equivalent to fluorescence of the 70–80 nM reference solution of rhodamine recorded in a commercial microcell adaptor. Because no modifications to the instruments are required in this method, a variety of steady-state and time-domain fluorescence measurements of the supported phospholipid bilayers may be performed with the spectral resolution using standard horizontal-beam spectrofluorometers.     

Unravelling the Complexities of Pseudocontact Shift Analysis in Lanthanide Coordination Complexes of Differing Symmetry

In two closely related series of eight‐coordinate lanthanide complexes, a switch in the sign of the dominant ligand field parameter and striking variations in the sign, amplitude and orientation of the main component of the magnetic susceptibility tensor as the Ln³⁺ ion is permuted conspire to mask modest changes in NMR paramagnetic shifts, but are evident in Yb EPR and Eu emission spectra.     

Link Prediction for Partially Observed Networks

Link prediction is one of the fundamental problems in network analysis. In many applications, notably in genetics, a partially observed network may not contain any negative examples, that is, edges known for certain to be absent, which creates a difficulty for existing supervised learning approaches. We develop a new method that treats the observed network as a sample of the true network with different sampling rates for positive (true edges) and negative (absent edges) examples. We obtain a relative ranking of potential links by their probabilities, using information on network topology as well as node covariates if available. The method relies on the intuitive assumption that if two pairs of nodes are similar, the probabilities of these pairs forming an edge are also similar. Empirically, the method performs well under many settings, including when the observed network is sparse. We apply the method to a protein–protein interaction network and a school friendship network.     

Concentration and regularization of random graphs

This paper studies how close random graphs are typically to their expectations. We interpret this question through the concentration of the adjacency and Laplacian matrices in the spectral norm. We study inhomogeneous Erdös‐Rényi random graphs on n vertices, where edges form independently and possibly with different probabilities p_ij. Sparse random graphs whose expected degrees are fail to concentrate; the obstruction is caused by vertices with abnormally high and low degrees. We show that concentration can be restored if we regularize the degrees of such vertices, and one can do this in various ways. As an example, let us reweight or remove enough edges to make all degrees bounded above by O(d) where . Then we show that the resulting adjacency matrix concentrates with the optimal rate: . Similarly, if we make all degrees bounded below by d by adding weight d / n to all edges, then the resulting Laplacian concentrates with the optimal rate: . Our approach is based on Grothendieck‐Pietsch factorization, using which we construct a new decomposition of random graphs. We illustrate the concentration results with an application to the community detection problem in the analysis of networks. © 2017 Wiley Periodicals, Inc. Random Struct. Alg., 51, 538–561, 2017     

Cover Picture: A Practical One-Pot Synthesis of Positron Emission Tomography (PET) Tracers via Nickel-Mediated Radiofluorination (ChemistryOpen 4/2015)

Invited for this months cover picture is the group of Professor Bernd Neumaier at the Institute of Radiochemistry and Experimental Molecular Imaging at the University Clinic of Cologne. The cover picture shows the differences in brain metabolism of a healthy young and a healthy old subject, as well as a patient suffering from Parkinsons disease (left to right) uncovered by 6-[¹⁸F]FDOPA-positron emission tomography (PET). Morbus Parkinson occurs when nerve cells that produce dopamine begin to die. The shortage of dopamine leads to movement problems in affected individuals. 6-[¹⁸F]FDOPA is extensively used to evaluate the progression of Parkinsons disease. Bold stick projections of this PET tracer, as well as a neuronal network, are seen in the background. Unfortunately, conventional procedures to produce 6-[¹⁸F]FDOPA are cumbersome. Thus, several recent developments aim at the simplification of this radiosynthesis. In our work, we studied the applicability of the recently reported Ni-mediated radiofluorination approach for daily routine production of 6-[¹⁸F]FDOPA. For more details, see the Full Paper on p. 457 ff.     

Efficient 1 W continuous-wave diode-pumped Er,Yb:YAl3(BO3)4 laser

We report the spectroscopy and high-power continuous-wave (CW) diode-pumped laser operation of Er:Yb:YAl3(BO3) crystal. Absorption and stimulated emission spectra, emission lifetimes, and efficiency of energy transfer from Yb3+ to Er3+ ions were determined. A CW Er:Yb:YAB laser emitting at 1602, 1555, and 1531 nm with output power as high as 1W and slope efficiency up to 35% was demonstrated.     

Isolation,Chemical Characterization and Antioxidant Activity of Pectic Polysaccharides of Fireweed (Epilobium angustifolium L.)

The aim of this study was to isolate pectins with antioxidant activity from the leaves of Epilobium angustifolium L. Two pectins, EA-4.0 and EA-0.8, with galacturonic acid contents of 88 and 91% were isolated from the leaves of E. angustifolium L. by the treatment of plant raw materials with aqueous hydrochloric acid at pH 4.0 and 0.8, respectively. EA-4.0 and EA-0.8 were found to scavenge the DPPH radical in a concentration-dependent manner at 17–133 μg/mL, whereas commercial apple pectin scavenged at 0.5–2 mg/mL. The antioxidant activity of EA-4.0 was the highest and exceeded the activity of EA-0.8 and a commercial apple pectin by 2 and 39 times (IC₅₀—0.050, 0.109 and 1.961 mg/mL), respectively. Pectins EA-4.0 and EA-0.8 were found to possess superoxide radical scavenging activity, with IC₅₀s equal to 0.27 and 0.97 mg/mL, respectively. Correlation analysis of the composition and activity of 32 polysaccharide fractions obtained by enzyme hydrolysis and anionic exchange chromatography revealed that the antioxidant capacity of fireweed pectins is mainly due to phenolics and is partially associated with xylogalacturonan chains. The data obtained demonstrate that pectic polysaccharides appeared to be bioactive components of fireweed leaves with high antioxidant activity, which depend on pH at their extraction.     

Mobility op polymer micelles

The nanosecond mobility of polymer micelles in aqueous solution of poly(N-propylmethacrylamide) and that of reversed micelles of a surfactant in organic solvents were studied by polarized luminescence. The factors affecting the polymer micelles formation and the effect of polymers solubilized in systems of reversed micelles of a surfactant on their relaxation properties were established.     

A novel reaction producing the rhodium(I) complexes with π-coordinated tetraphenylborate anion, (π-PhBPh3). X-ray study of [Rh(PPh3)2(π-PhBPh3)]

Treating the complexes [Rh(TFA)(PPh₃)₂], [Rh(HFA)(PPh₃)₂], and [Rh(TFA)(Cod)] (TFA - trifluoroacetylacetonate, HFA - hexafluoroacetylacetonate, Cod - 1,5 cyclooctadiene) with an excess of NaBPh₄ in acetonitrile yields the rhodium(I) complexes with coordinated [BPh₄]⁻ anion, [Rh(PPh₃)₂(π-PhBPh₃)] · 2MeCN (I) and [Rh(Cod)(π-PhBPh₃)] (II). The reactions present a new example of β-diketonate ligand replacement. The ¹H, ³¹P, and ¹¹B NMR spectra of I and II are discussed. [Rh(PPh₃)₂(π-PhBPh₃)] has been characterized by single crystal X-ray analysis.