The mechanism of bacteriorhodopsin functioning. I. The light-induced proton throw-over by retinal

The path of proton motion in protein bacteriorhodopsin is constructed: Tyr 43 → Tyr 26 → Asp 212 → Tyr 83 → Tyr 57 → Tyr 79 → Glu 204 → Tyr 64 → Glu 74. From the position of quantum theory the light-induced isomerization of retinal, the process carrying out the proton and throw-over from the inlet H-bond chain (Tyr 43 → Tyr 26 → Lys 216) to the outlet one (Lys 216 → Asp 212 → … → Glu 74) are investigated. The kinetics of the transition of the excitation from the π-electron subsystem to the vibrational one is studied; the function of the nonequilibrial excitation distribution of the collective intramolecular retinal vibrations is found. The mechanism of deprotonation of Schiff base (transmission of proton to the outlet channel) is considered. The correspondence between the theoretically estimated states and spectroscopically identified forms of bacteriorhodosin (initial form bR, intermediates J, K) is proposed.     

Hydroformylation and hydrocarbethoxylation of 1,2-dicarbethoxy-1,2,3,6-tetrahydropyridazine and 1,2-dicarbethoxy-1,2,3,4-tetrahydropyridazine

The unsaturated compounds 1,2-dicarbethoxy-1,2,3,6-tetrahydropyridazine 1 and 1,2-dicarbethoxy-1,2,3,4-tetrahydropyridazine 2 have been hydroformylated and hydrocarbethoxylated in the presence of some well known cobalt, rhodium, palladium and platinum catalysts. The hydroformylation reaction can be tuned by a suitable choice of the catalyst precursor and reaction conditions, thus allowing the synthesis with high selectivity of one of the two possible isomeric aldehydes. The carbonylation reaction is less synthetically useful, since it shows low activity and unsatisfactory chemo- and regio-selectivity. However, the ester 1,2,4-tricarbethoxyhexahydropyridazine 10 can be prepared in good yield from olefin 1 by using the complex [PdCl₂(PPh₃)₂] as the catalyst precursor.     

A CNDO/INDO crystal orbital model for transition metal polymers of the 3d series—basis equations

The crystal orbital formalism in the tight-binding approximation is combined with a recently developed CNDO/INDO model for transition metal species of the 3d series in order to allow band structure calculations on the Hartree-Fock (HF) SCF level for one-dimensional (1D) chains with organometallic unit cells. The band structure approach based on the CNDO and INDO approximation can be used for any atom combination up to bromine under the inclusion of the 3d series. The matrix elements for the tight-binding Hamiltonian are derived for an improved CNDO and INDO framework. The total energy of the 1D chain is partitioned into one-center contributions and into two-center increments of the intracell and intercell type. Semiempirical band structure calculations on simple model systems are compared with available ab initio data of high quality.     

Crystallization of filled nylon 6 III. Non-isothermal crystallization

Summary DSC data on crystallization kinetics from the melt at different cooling rates of nylon 6 containing various amonts of untreated and surface-treated fillers, were analyzed in terms of a modified Kolmogorov-Avrami equation. It was established that mechanism of crystallinity development in molten nylon 6 does not change appreciably in presence of aminosilane-treated glass beads and small amounts of untreated glass beads, whereas time exponentn was found to decrease with increasing filler content in samples containing untreated glass beads and Aerosil. On the other hand, dependence of temperature of the onset of crystal nucleation on cooling rate obeyedm = 2 law for pure nylon 6 and samples containing surface-treated filler, whilem = 4 law seemed to hold for samples containing large amounts of untreated fillers at low cooling rates (m is the exponent at degree of supercooling). It was concluded that although isothermal conditions of crystallization should be preferred for further quantitative investigations of polymer-filler interactions in highly filled polymer melts, the above results qualitatively are consistent with trends discovered in isothermal crystallization experiments.     

Synthesis of(E)7-[[2-[4-(m-trifluoromethylphenoxy)-3α and 3β-hydroxy-1-butenyl]-5-oxo-1 -pyrrolidinyl]]heptanoic acids

The synthesis of an 8-aza-PGE₁ analog, (E)-7-[[2-[4-(m-trifluoromethylphenoxy)-3α and 3β-hydroxy-1-butenyl]-5-oxo-pyrrolidinyl]]heptanoic acids is reported.     

On the synthesis of the N2F+5 cation. A critical comment on the paper by Toy and Stringham.

Toy and Stringham recently reported [1] the synthesis of N₂F⁺₅ (CF₃)₃CO^-, a salt containing the novel pentafluorohydrazinium cation. This cation would be of significant academic and practical interest [2] since it would constitute the first known example of a substituted NF⁺₄ cation, i.e. an NF⁺₄ cation in which a fluorine ligand is replaced by an NF₂ group. According to the authors of [1], N₂F⁺₅(CF₃)₃CO^- was formed in a very unusual reaction involving the transfer of a fluorine cation from (CF₃)₃COF to N₂F₄ according to:

     

Direct detection of the biradicals generated in the Norrish type II reaction

The biradicals generated in the Norrish type II reaction from the triplet manifold have been observed using laser flash photolysis techniques. The spectra and extinction coefficients closely resemble those of typical ketyl radicals. Typical lifetimes are in the 40–100 ns range depending on the solvent. Their interaction with oxygen is essentially diffusion controlled.     

Random peptide synthesis using immobilized enzymes in high concentrations of organic solvents

Trypsin, leucine aminopeptidase, and carboxypeptidase B were separately immobilized on controlled pore glass and reacted with a dipeptide substrate in high concentrations of either acetone or 1-propanol. Hydrolytic activity was demonstrated and evidence for the possible synthesis of peptide polymer is presented. Directed synthesis using amino acids and blocked amino acids as substrates was not successful.