Lithiation of (tBuNH)3PNSiMe3 and formation of tetraimidophosphate complexes containing M3O3 rings (M = Li, K): X-ray structure of the stable radical [(Me3SiN)P(mu3-N(t)Bu)3[mu3-Li(THF)]3(OtBu))

The reaction of ((t)BuNH)(3)PNSiMe(3) (1) with 1 equiv of (n)BuLi results in the formation of Li[P(NH(t)Bu)(2)(N(t)Bu)(NSiMe(3))] (2); treatment of 2 with a second equivalent of (n)BuLi produces the dilithium salt Li(2)[P(NH(t)Bu)(N(t)Bu)(2)(NSiMe(3))] (3). Similarly, the reaction of 1 and (n)BuLi in a 1:3 stoichiometry produces the trilithiated species Li(3)[P(N(t)Bu)(3)(NSiMe(3))] (4). These three complexes represent imido analogues of dihydrogen phosphate [H(2)PO(4)](-), hydrogen phosphate [HPO(4)](2)(-), and orthophosphate [PO(4)](3)(-), respectively. Reaction of 4 with alkali metal alkoxides MOR (M = Li, R = SiMe(3); M = K, R = (t)Bu) generates the imido-alkoxy complexes [Li(3)[P(N(t)Bu)(3)(NSiMe(3))](MOR)(3)] (8, M = Li; 9, M = K). These compounds were characterized by multinuclear ((1)H, (7)Li, (13)C, and (31)P) NMR spectroscopy and, in the cases of 2, 8, and 9.3THF, by X-ray crystallography. In the solid state, 2 exists as a dimer with Li-N contacts serving to link the two Li[P(NH(t)Bu)(2)(N(t)Bu)(NSiMe(3))] units. The monomeric compounds 8 and 9.3THF consist of a rare M(3)O(3) ring coordinated to the (LiN)(3) unit of 4. The unexpected formation of the stable radical [(Me(3)SiN)P(mu(3)-N(t)Bu)(3)[mu(3)-Li(THF)](3)(O(t)Bu)] (10) is also reported. X-ray crystallography indicated that 10 has a distorted cubic structure consisting of the radical dianion [P(N(t)Bu)(3)(NSiMe(3))](.2)(-), two lithium cations, and a molecule of LiO(t)Bu in the solid state. In dilute THF solution, the cube is disrupted to give the radical monoanion [(Me(3)SiN)((t)BuN)P(mu-N(t)Bu)(2)Li(THF)(2)](.-), which was identified by EPR spectroscopy.     

An E.S.R. study of the triplet dianions of 1,3,5-triphenylbenzene and 2,4,6-triphenyl-sym-triazine

Upon prolonged alkali reduction in ethereal solvents 1,3,5-triphenylbenzene (Tpb), 2,4,6-triphenyl-sym-triazine (Tpt) and 2,4,6-tritolyl-sym-triazine (Ttt) can be reduced to their dinegative ions. Dissolved in rigid solvent matrices these ions produce E.S.R. spectra which are characteristic for randomly oriented triplet systems. Hückel and SCF MO calculations indicate that these dianions have a twofold degenerate lowest anti-bonding level.

Although the ions Tpb^2- and Tpt^2- are iso-electronic their magnetic properties prove to be strikingly different. While Tpb^2- has a triplet ground state irrespective of solvent, counter ion and temperature, Tpt^2- (and also Ttt^2-) has a singlet ground state with a thermally accessible triplet state in solvents with poorly solvating properties and has a triplet ground state in better solvating media. Furthermore, the zero field splitting parameters D and E of the lowest triplet states of Tpt^2- and Ttt^2- are markedly different from those obtained from Tpb^2-. The former show a considerably larger D value than Tpb^2- and, in contrast to Tpb^2-, the ions Tpt^2- and Ttt^2- have a non-zero E value in poorly solvating solvents, pointing to a non-trigonal spin distribution of the triplet systems.

An explanation of the observed differences is given in terms of current MO theories. The results suggest that in the case of Tpt^2- and Ttt^2- the association with the counter ions even in strongly solvating solvents is very strong.     

Importance sampling for non-Markovian tandem queues using subsolutions

Queueing Systems - In this paper, we use importance sampling simulation to estimate the probability that the number of customers in a d-node GI|GI|1 tandem queue reaches some high level N in a busy...     

Improved Identification and Relative Quantification of Sites of Peptide and Protein Oxidation for Hydroxyl Radical Footprinting

Protein oxidation is typically associated with oxidative stress and aging and affects protein function in normal and pathological processes. Additionally, deliberate oxidative labeling is used to probe protein structure and protein–ligand interactions in hydroxyl radical protein footprinting (HRPF). Oxidation often occurs at multiple sites, leading to mixtures of oxidation isomers that differ only by the site of modification. We utilized sets of synthetic, isomeric “oxidized” peptides to test and compare the ability of electron-transfer dissociation (ETD) and collision-induced dissociation (CID), as well as nano-ultra high performance liquid chromatography (nanoUPLC) separation, to quantitate oxidation isomers with one oxidation at multiple adjacent sites in mixtures of peptides. Tandem mass spectrometry by ETD generates fragment ion ratios that accurately report on relative oxidative modification extent on specific sites, regardless of the charge state of the precursor ion. Conversely, CID was found to generate quantitative MS/MS product ions only at the higher precursor charge state. Oxidized isomers having multiple sites of oxidation in each of two peptide sequences in HRPF product of protein Robo-1 Ig1-2, a protein involved in nervous system axon guidance, were also identified and the oxidation extent at each residue was quantified by ETD without prior liquid chromatography (LC) separation. ETD has proven to be a reliable technique for simultaneous identification and relative quantification of a variety of functionally different oxidation isomers, and is a valuable tool for the study of oxidative stress, as well as for improving spatial resolution for HRPF studies.

Measuring methotrexate polyglutamates in red blood cells: a new LC-MS/MS-based method

The folate antagonist methotrexate (MTX) is the anchor drug in the treatment of rheumatoid arthritis. The therapeutic effects of MTX are attributed to the intracellular levels of MTX, present in the cell as polyglutamates (MTXPGn). We developed a new liquid chromatography-electrospray ionization-tandem mass spectrometry (LC-ESI-MS/MS)-based assay to separately quantitate MTXPGn in red blood cells using stable-isotope-labelled internal standards. Samples were analyzed by LC-ESI-MS/MS using a Waters Acquity UPLC BEH C18 column with a 5–100% organic gradient of 10 mM ammonium bicarbonate (pH 10) and methanol. The analysis consisted of simple sample preparation and a 6-min run time. Detection was done using a Waters Acquity UPLC coupled to a Waters Quattro Premier XE with electrospray ionization operating in the positive ionization mode. Assay validation was performed following recent Food and Drug Administration guidelines. The method was linear from 1–1,000 nM for all MTXPGn (R ²?>?0.99). The coefficient of variation ranged from 1–4% for intraday precision and 6–15% for interday precision. Samples were stable for at least 1 month at ?80 °C. Recovery ranged from 98–100%, and the relative matrix-effect varied from 95–99%. The lower limit of quantitation was 1 nM for each MTXPGn. Fifty patient samples from the tREACH study were analyzed. The MTXPGn concentration and distribution of these samples were comparable with values reported in literature. The developed LC-ESI-MS/MS method for the quantitative measurement of MTXPGn in red blood cells is both sensitive and precise within the clinically relevant range. The method can be easily applied in clinical laboratories due to the combination of simple pre-treatment with robust LC-ESI-MS/MS.

Quantum‐Chemical and Electrochemical Investigation of the Electrochemical Windows of Halogenated Carborate Anions

The range of electrochemical stability of a series of weakly coordinating halogenated (Hal=F, Cl, Br, I) 1‐carba‐closo‐dodecaborate anions, [1‐R‐CB₁₁X₅Y₆]^? (R=H, Me; X=H, Hal, Me; Y=Hal), has been established by using quantum chemical calculations and electrochemical methods. The structures of the neutral and dianionic radicals, as well as the anions, have been optimized by using DFT calculations at the PBE0/def2‐TZVPP level. The calculated structures are in good agreement with existing experimental data and with previous calculations. Their gas‐phase ionization energies and electron affinities were calculated based on their optimized structures and were compared with experimental (cyclic and square‐wave) voltammetry data. Electrochemical oxidation was performed in MeCN at room temperature and in liquid sulfur dioxide at lower temperatures. All of the anions show a very high resistance to the onset of oxidation (2.15–2.85 V versus Fc^0/+), with only a minor dependence of the oxidation potential on the different halogen substituents. In contrast, the reduction potentials in MeCN are strongly substituent dependent (?1.93 to ?3.32 V versus Fc^0/+). The calculated ionization energies and electron affinities correlate well with the experimental redox potentials, which provide important verification of the thermodynamic validity of the mostly irreversible redox processes that are observed for this series. The large electrochemical windows that are afforded by these anions indicate their suitability for electrochemical applications, for example, as supporting electrolytes.     

Semi-permeable surface analytical reversed-phase column for the improved trace analysis of acidic pesticides in water with coupled-column reversed-phase liquid chromatography with UV detection. Determination of bromoxynil and bentazone in surface water.

The coupled-column (LC-LC) configuration consisting of a 3 microm C18 column (50 x 4.6 mm I.D.) as the first column and a 5 microm C18 semi-permeable-surface (SPS) column (150 x 4.6 mm I.D.) as the second column appeared to be successful for the screening of acidic pesticides in surface water samples. In comparison to LC-LC employing two C18 columns, the combination of C18/SPS-C18 significantly decreased the baseline deviation caused by the hump of the co-extracted humic substances when using UV detection (217 nm). The developed LC-LC procedure allowed the simultaneous determination of the target analytes bentazone and bromoxynil in uncleaned extracts of surface water samples to a level of 0.05 microg/l in less than 15 min. In combination with a simple solid-phase extraction step (200 ml of water on a 500 mg C18-bonded silica) the analytical procedure provides a high sample throughput. During a period of about five months more than 200 ditch-water samples originating from agricultural locations were analyzed with the developed procedure. Validation of the method was performed by randomly analyzing recoveries of water samples spiked at levels of 0.1 microg/l (n=10), 0.5 microg/l (n=7) and 2.5 microg/l (n=4). Weighted regression of the recovery data showed that the method provides overall recoveries of 95 and 100% for bentazone and bromoxynil, respectively, with corresponding intra-laboratory reproducibilities of 10 and 11%, respectively. Confirmation of the analytes in part of the samples extracts was carried out with GC-negative ion chemical ionization MS involving a derivatization step with bis(trifluoromethyl)benzyl bromide. No false negatives or positives were observed.     

The mechanical waveform of the basilar membrane. IV. Tone and noise stimuli

Analysis of mechanical cochlear responses to wide bands of random noise clarifies many effects of cochlear nonlinearity. The previous paper [de Boer and Nuttall, J. Acoust. Soc. Am. 107, 1497-1507 (2000)] illustrates how closely results of computations in a nonlinear cochlear model agree with responses from physiological experiments. In the present paper results for tone stimuli are reported. It was found that the measured frequency response for pure tones differs little from the frequency response associated with a noise signal. For strong stimuli, well into the nonlinear region, tones have to be presented at a specific level with respect to the noise for this to be true. In this report the nonlinear cochlear model originally developed for noise analysis was modified to accommodate pure tones. For this purpose the efficiency with which outer hair cells modify the basilar-membrane response was made into a function of cochlear location based on local excitation. For each experiment, the modified model is able to account for the experimental findings, within 1 or 2 dB. Therefore, the model explains why the type of filtering that tones undergo in the cochlea is essentially the same as that for noise signals (provided the tones are presented at the appropriate level).