Synthesis,characterization, DNA binding,antibacterial, and antioxidant activity of new bis-phthalimides

New bis-phthalimides were synthesized by 2: 1 condensation of phthalic anhydride and tetrachlorophthalic anhydride with 1,2,4-triazole-3,5-diamine, pyridine-2,6-diamine, and 4-hydroxypyrimidine- 2,6-diamine. The synthesized compounds were characterized by elemental analyses and IR, ¹H NMR, and mass spectra. Their interaction with calf thymus DNA (ct-DNA) was studied by UV-Vis spectrophotometry, cyclic voltammetry, and viscosity measurements, which revealed intercalative mode of binding to ct-DNA. Antibacterial activity of the synthesized compounds against Escherichia coli and Streptococcus mutans was assessed in vitro by the agar well diffusion method. The antioxidant activity of these compounds was estimated by DPPH assay.     

Influence of the chelate ligand structure on the amide methanolysis reactivity of mononuclear zinc complexes

Zinc complexes of three new amide-appended ligands have been prepared and isolated. These complexes, [(dpppa)Zn](ClO4)2 (4(ClO4)2; dpppa = N-((N,N-diethylamino)ethyl)-N-((6-pivaloylamido-2-pyridyl)methyl)-N-((2-pyridyl)methyl)amine), [(bdppa)Zn](ClO4)2 (6(ClO4)2; bdppa = N,N-bis((N,N-diethylamino)ethyl)-N-((6-pivaloylamido-2-pyridyl)methyl)amine), and [(epppa)Zn](ClO4)2 (8(ClO4)2; epppa = N-((2-ethylthio)ethyl)-N-((6-pivaloylamido-2-pyridyl)methyl)-N-((2-pyridyl)methyl)amine), have been characterized by X-ray crystallography (4(ClO4)2 and 8(ClO4)2), 1H and 13C NMR, IR, and elemental analysis. Treatment of 4(ClO4)2 or 8(ClO4)2 with 1 equiv of Me4NOH.5H2O in methanol-acetonitrile (5:3) results in amide methanolysis, as determined by the recovery of primary amine-appended forms of the chelate ligand following removal of the zinc ion. These reactions proceed via the initial formation of a deprotonated amide intermediate ([(dpppa-)Zn]ClO4 (5) and [(epppa-)Zn]ClO4 (9)) which in each case has been isolated and characterized (1H and 13C NMR, IR, elemental analysis). Treatment of 6(ClO4)2 with Me4NOH.5H2O in methanol-acetonitrile results in the formation of a deprotonated amide complex, [(bdppa-)Zn]ClO4 (7), which was isolated and characterized. This complex does not undergo amide methanolysis after prolonged heating in a methanol-acetonitrile mixture. Kinetic studies and construction of Eyring plots for the amide methanolysis reactions of 4(ClO4)2 and 8(ClO4)2 yielded thermodynamic parameters that provide a rationale for the relative rates of the amide methanolysis reactions. Overall, we propose that the mechanistic pathway for these amide methanolysis reactions involves reaction of the deprotonated amide complex with methanol to produce a zinc methoxide species, the reactivity of which depends, at least in part, on the steric hindrance imparted by the supporting chelate ligand. Amide methanolysis involving a zinc complex supported by a N2S2 donor chelate ligand (3(ClO4)2) is more complicated, as in addition to the formation of a deprotonated amide intermediate free chelate ligand is present in the reaction mixture.     

Convergence acceleration of segregated algorithms using dynamic tuning additive correction multigrid strategy

A convergence acceleration method based on an additive correction multigrid–SIMPLEC (ACM‐S) algorithm with dynamic tuning of the relaxation factors is presented. In the ACM‐S method, the coarse grid velocity correction components obtained from the mass conservation (velocity potential) correction equation are included into the fine grid momentum equations before the coarse grid momentum correction equations are formed using the additive correction methodology. Therefore, the coupling between the momentum and mass conservation equations is obtained on the coarse grid, while maintaining the segregated structure of the single grid algorithm. This allows the use of the same solver (smoother) on the coarse grid. For turbulent flows with heat transfer, additional scalar equations are solved outside of the momentum–mass conservation equations loop. The convergence of the additional scalar equations is accelerated using a dynamic tuning of the relaxation factors. Both a relative error (RE) scheme and a local Reynolds/Peclet (ER/P) relaxation scheme methods are used. These methodologies are tested for laminar isothermal flows and turbulent flows with heat transfer over geometrically complex two‐ and three‐dimensional configurations. Savings up to 57% in CPU time are obtained for complex geometric domains representative of practical engineering problems. Copyright © 1999 John Wiley & Sons, Ltd.     

Control of light in a quantized four level graphene atomic system via self and cross-Kerr nonlinearity

We investigate self and cross-Kerr nonlinearity in a four level quantized graphene atomic medium. The absorption, dispersion, transmission and subluminal/superluminal behaviors of a probe light field are studied. An amplification of the probe light field is observed in the absorption spectrum. The normal and anomalous slope of dispersion is also investigated at the positive/negative absorption region. It is shown that Kerr nonlinearity invert and enhance the subluminal/superluminal behaviors of the pulse and self-Kerr effect is found to be more subluminal/superluminal as compared to cross-Kerr effect. The results show significant applications in information storage, self and cross phase modulation and lasing without inversion.     

Analysis and use of fragment-occurrence data in similarity-based virtual screening

Current systems for similarity-based virtual screening use similarity measures in which all the fragments in a fingerprint contribute equally to the calculation of structural similarity. This paper discusses the weighting of fragments on the basis of their frequencies of occurrence in molecules. Extensive experiments with sets of active molecules from the MDL Drug Data Report and the World of Molecular Bioactivity databases, using fingerprints encoding Tripos holograms, Pipeline Pilot ECFC_4 circular substructures and Sunset Molecular keys, demonstrate clearly that frequency-based screening is generally more effective than conventional, unweighted screening. The results suggest that standardising the raw occurrence frequencies by taking the square root of the frequencies will maximise the effectiveness of virtual screening. An upper-bound analysis shows the complex interactions that can take place between representations, weighting schemes and similarity coefficients when similarity measures are computed, and provides a rationalisation of the relative performance of the various weighting schemes.     

Preparation of C3‐Symmetric Homochiral syn‐Trisnorbornabenzenes through Regioselective Cyclotrimerization of Enantiopure Iodonorbornenes

C₃‐symmetric homochiral (?)‐syn‐trisoxonorbornabenzene 1 possessing a rigid cup‐shaped structure was synthesized through a novel regioselective cyclotrimerization of enantiopure iodonorbornenes catalyzed by palladium nanoclusters. The yield of the cyclotrimerization was dependent on the stability of the palladium clusters, which was ascertained from the appearance and TEM images of the reaction mixtures. The efficient preparation of (?)‐syn‐ 1 was established in short steps, including the newly developed cyclotrimerization reaction. The thus‐prepared homochiral (?)‐syn‐ 1 can serve as a key intermediate for the synthesis of C₃‐symmetric homochiral cup‐shaped molecules with a helical arrangement of substituents. Introduction of several types of substituents was well demonstrated through palladium‐catalyzed coupling reactions with the corresponding phosphate and triflate of (?)‐syn‐ 1 .     

On k-uniformly close-to-convex functions of complex order

In this paper, we define and study some subclasses of analytic functions by using fractional derivative operator. Some interesting properties, coefficients problems and inclusion results of these classes are investigated. It is also shown that these classes are closed under convolution with convex functions and some applications are given.