Experimental and theoretical electron density study of estrone

The electron density and the electrostatic potential (ESP) distributions of estrone have been determined using X-ray diffraction analysis and compared with theoretical calculations in the solid and gas phases. X-ray diffraction measurements are performed with a Rigaku Rapid rotating anode diffractometer at 20 K. The electron density in the estrone crystal has been described with the multipole model, which allowed extensive topological analysis and calculation of the ESP. From DFT calculations in the solid state a theoretical X-ray diffraction data set has been produced and treated in the same way as the experimental data. Two sets of single molecule DFT calculations were performed: (a) An electron density distribution was obtained via a single-point calculation with a large basis set at the experimental geometry and subsequently analyzed according to the quantum theory of atoms in molecules (AIM) to obtain the bond and most atomic properties, and (b) another electron density distribution was obtained with a smaller basis set, but at a geometry optimized using the same basis set for the analysis of atomic energies. An interesting locally stabilizing hydrogen-hydrogen bond path linking H(1) and H(11B) is found which represents the first characterization of such bonding in a steroid molecule. AIM delocalization indices were shown to be well correlated to the experimental electron density at the bond critical points through an exponential relationship. The aromaticity of ring A, chemical bonding, the O(1)...O(2) distance necessary for estrogenic activity, and the electrostatic potential features are also discussed.     

A hydrogen-bonded adduct containing seven-component supramolecular aggregates

The title compound is a salt, 3,6,9,16,19,22-hexaaza­tri­cyclo­[22.2.2.2^11,14]­triaconta-1(26),11(29),12,14(30),24,27-hexa­ene–3,5-di­nitro­benzoic acid–methanol (1/4/2), C₂₄H₄₂N₆⁴⁺·4C₇H₃N₂O₆⁻·2CH₄O, in which the cation lies across a centre of inversion and one of the two independent anions is positionally disordered over two sets of atom sites having equal occupancy. The components are linked by four types of N—H⃛O hydrogen bond [N⃛O 2.674 (2)–2.815 (2) Å; N—H⃛O 149–163°] and one type of O—H⃛O hydrogen bond in which the acceptor is disordered over two closely adjacent sites [O⃛O 2.67 (4) and 2.75 (4) Å; O—H⃛O 172 and 173°], forming centrosymmetric seven-component aggregates.     

Vanadium(V) tartrato complexes: speciation in the H3O+(OH-)/H2VO4-/(2R,3R)-tartrate system and X-ray crystal structures of Na4[V4O8(rac-tart)2].12H2O and (NEt4)4[V4O8((R,R)-tart)2].6H2O (tart = C4H2O6(4-))

A study of the aqueous H3O+(OH-)/H2VO4-/(2R,3R)-tartrate system has been performed at 273 K in a 1.0 mol/L Na+(Cl-) ionic medium using 51V NMR spectroscopy. In this relatively complicated system, more than 12 different species were observed. Ligand concentration, vanadate concentration, and pH variation studies were carried out, particularly for the range of pH 5.8-8.0 and for pH 2.4. Chemical shifts, vanadium-ligand stoichiometry, and also composition and formation constants for some, but not all, species are given. Despite some reduction of vanadium(V) to vanadium(IV) in an acidic medium at pH approximately 2.4, the stoichiometries of the principal species in solution at this pH were determined. Electrospray ionization mass spectra for some solutions were obtained and were in accordance with the conclusions drawn from the speciation studies. A series of crystalline vanadium(V) tartrato complexes M4[V4O8(tart)2].aq were also prepared and characterized. X-ray diffraction studies of Na4[V4O8(rac-tart)2].12H2O (1) and (NEt4)4[V4O8((R,R)-tart)2].6H2O (2) revealed unique tetranuclear [V4O8(tart)2]4- ions for which the {V4O4} rings have boat conformations.     

Interaction of the antimicrobial peptide dicynthaurin with membrane phospholipids at the air-liquid interface

This paper reports the first study on the interaction of the antimicrobial peptide dicynthaurin with 1,2-dipalmitoyl-glycerophosphatidyl-glycerol investigated in monolayers at the air-liquid interface. The influence of the peptide on the two-dimensional phase behavior of the negatively charged lipid was elucidated by means of pressure-area isotherm measurements, fluorescence microscopy, and grazing incidence X-ray diffraction measurements. The pure peptide forms a stable monolayer at the air-liquid interface up to 30 mN/m as shown for both the monomeric and the dimeric cynthaurins. The peptide lipid interaction was monitored in isotherm measurements showing a strong adsorption of the peptide and stabilization at the interface promoted by the lipid monolayer. The X-ray diffraction measurements in agreement with fluorescence microscopy studies showed that the peptide destabilizes the condensed chain lattice, leading to a complete fluidization of the condensed lipid phase on physiological buffer. The adsorption of the peptide to the negatively charged lipid monolayer and the fluidization of the condensed chain lattice suggest a direct link to the peptides' ability to expand the bacterial membrane that would be relevant for the in vivo mode of action.     

Propane fuel cells using phosphoric-acid-doped polybenzimidazole membranes

Propane fuel cells using H(3)PO(4)-doped polybenzimidazole polymer membranes produce low and unsustainable current densities at temperatures up to 250 degrees C under anhydrous conditions. Stable intermediate species blocked the surface of noble metal anode catalysts, and the intermediate species could not react further into desorbable final products. In contrast, when water was introduced by light humidification (S(r) 0.08%) of the propane stream, sustainable and higher current densities were achieved. Water participated in the reaction sequence to form surface-bound hydrocarbon and then oxygen-containing intermediates and thereby generated CO and CO(2) as the only carbon-containing products.     

Effects of the attractive interactions in the thermodynamic, dynamic, and structural anomalies of a two length scale potential

Using molecular dynamic simulations, we study a system of particles interacting through a continuous core-softened potentials consisting of a hard core, a shoulder at closest distances, and an attractive well at further distance. We obtain the pressure-temperature phase diagram of this system for various depths of the tunable attractive well. Since this is a two length scale potential, density, diffusion, and structural anomalies are expected. We show that the effect of increasing the attractive interaction between the molecules is to shrink the region in pressure in which the density and the diffusion anomalies are present. If the attractive forces are too strong, particle will be predominantly in one of the two length scales and no density of diffusion anomaly is observed. The structural anomalous region is present for all the cases.     

Lithol Red: a systematic structural study on salts of a sulfonated azo pigment

The first systematic series of single-crystal diffraction structures of azo lake pigments is presented (Lithol Red with cations=Mg(II), Ca(II), Sr(II), Ba(II), Na(I) and Cd(II)) and includes the only known structures of non-Ca examples of these pigments. It is shown that these commercially and culturally important species show structural behaviour that can be predicted from a database of structures of related sulfonated azo dyes, a database that was specifically constructed for this purpose. Examples of the successful structural predictions from the prior understanding of the model compounds are that 1) the Mg salt is a solvent-separated ion pair, whereas the heavier alkaline-earth elements Ca, Sr and Ba form contact ion pairs, namely, low-dimensional coordination complexes; 2) all of the Lithol Red anions exist as the hydrazone tautomer and have planar geometries; and 3) the commonly observed packing mode of alternating inorganic layers and organic bilayers is as expected for an ortho-sulfonated azo species with a planar anion geometry. However, the literature database of dye structures has no predictive use for organic solvate structures, such as that of the observed Na Lithol Red DMF solvate. Interestingly, the Cd salt is isostructural with the Mg salt and not with the Ca salt. It is also observed that linked eight-membered [MOSO](2) rings are the basic coordination motif for all of the known structures of Ca, Sr and Ba salts of sulfonated azo pigments in which competing carboxylate groups are absent.     

General and efficient insertion of carbons carrying benzotriazole

Anions formed from the lithiation of 1-(1-benzotriazolylalkyl)benzotriazoles (1, 6) and 1-(1-methylthioalkyl)benzotriazoles (10 and 10a) with n-BuLi underwent additions to cyclic and acyclic ketones giving intermediates 3a-f, 7b-f, and 11b-d, respectively, in excellent yields. Thermal rearrangements of intermediates 3a,b,d-f and 7b-d,f in the presence of zinc bromide provided one-carbon chain-extended or ring-expanded alpha-benzotriazolyl ketones 4a,b,d-f and 8b-d,f in moderate yields with excellent regioselectivity. By contrast, intermediates 11b-d on treatment with zinc bromide loose a molecule of benzotriazole followed by intramolecular cyclization of the resulting intermediates 12b-d to provide the 2,3- and 1,2,3-substituted indenes 13b-d in good yields.     

Properties of the polyhydride anions [WH5(PMe2Ph)3]- and [ReH4(PMePh2)3]- and periodic trends in the acidity of polyhydride complexes

The new anionic complexes [K(18-crown-6)][WH5(PMe2Ph)3], [K(1,10-diaza-18-crown-6)][WH5(PMe2Ph)3], [K(2,2,2-crypt)][ReH4(PMePh2)3], and [K(1,10-diaza-18-crown-6)][ReH4(PMePh2)3] were prepared by reaction of KH/crown or KH/crypt with the appropriate neutral polyhydride WH6(PMe2Ph)3 or ReH5(PMePh2)3. The rate of deprotonation of the rhenium hydride in THF is much greater for the reaction involving crypt compared with that of crown. The structure of [ReH4(PMePh2)3]- is distorted pentagonal bipyramidal as determined by an X-ray diffraction study of the crypt salt. No hydridic-protonic M-H...HN bonding is detected between the hydrides of the anionic hydrides and the amino hydrogens of the cations [K(1,10-diaza-18-crown-6)]+ suggesting that stronger M-H...K interactions are present. Acid dissociation constants Ka of polyhydride complexes in THF, approximately corrected for ion pairing, are determined by NMR in order to better understand the periodic trends of metal hydrides. The pKalphaTHF of (WH6(PMe2Ph)3/[WH5(PMe2Ph)3]-) is 42+/-4 according to the equilibrium set up by reacting WH6(PMe2Ph)3 with [K(2,2,2-crypt)][ReH6(PCy3)2]. The pKalphaTHF for ReH5(PMePh2)3 can be estimated as greater than the pKalphaTHF of 38 for HNPh2 and less than the pKalphaTHF of 41 for ReH7(PCy3)2. Reaction of the phosphazene base P4-tBu with ReH7(PCy3)2 gave an equilibrium with [HP4-tBu]+[ReH6(PCy3)2]- whereas reaction with WH6(PMe2Ph)3 gave an equilibrium with [HP4-tBu]+[WH5(PMe2Ph)3]-. From these and a related equilibrium, the pKalphaTHF of [HP4-tBu]+ is found to be 40+/-4. In general, neutral complexes MHx(PR3)n (M=W, Re, Ru, Os, Ir; n=3, 2) studied to date have pKalphaTHF values from 30 to 44 on going from phenyl-substituted to alkyl-substituted phosphine ligands whereas MHx(PR3)n+ (M=Re, Fe, Ru, Os, Co, Rh, Ni, Pd, Pt; n=4, 3), including diphosphine ligands ((PR3)2=PR2-PR2), have values from 12 to 23. From the equilibrium established from the reaction of [HP2-tBu][BPh4] and [K(2,2,2-crypt)][OP(OEt)2NPh], [HP2-tBu]+ was calculated to have a pKalphaTHF of 30+/-4. The equilibrium constant for the similar deprotonation reaction with [K(18-crown-6)][{ReH2(PMePh2)2}2(mu-H)3] confirmed this value.     

Selective addition to iridium of aryl C-H bonds ortho to coordinating groups. Not chelation-assisted

Precursors of the pincer-ligated iridium species, (PCP)Ir, react with nitrobenzene or acetophenone at ambient temperature to give O,C-chelated complexes resulting from addition of an aryl C-H bond and coordination of a nitro or acetyl oxygen. The C-H additions appear to be completely regioselective for the position ortho to the functional group; however, structural characterization and low-temperature NMR studies demonstrate that the reaction does not proceed via coordination of the functional group followed by C-H addition. In the case of nitrobenzene, kinetic preference for the para and meta positions is demonstrated at low temperature. Addition occurs more slowly at the ortho position, without assistance by the functional group; the ortho-C-H addition product is then trapped by chelation.