Evaluation of the redox properties and anti/pro-oxidant effects of selected flavonoids by means of a DNA-based electrochemical biosensor

Quercetin and rutin as well as catechin and epigallocatechin gallate were investigated, as widely distributed representatives of flavonols and flavanols, respectively, regarding their anti/pro-oxidant properties. The flavonoids are irreversibly oxidized at a dsDNA-modified screen-printed electrode within 0.368 to 0.449 V vs. SHE without binding to DNA. Using the DNA biosensor the detection scheme of a DNA prevention/degradation exploits the [Co(phen)(3)](3+) complex as an electrochemical DNA marker. Antioxidant activity of flavonoids was tested in a model cleavage mixture composed of 5 x 10(-7) mol L(-1) [Cu(phen)(2)](2+) as the catalyst, 1 x 10(-3) mol L(-1) ascorbic acid as the chemical reductant and atmospheric oxygen as the natural oxidant where reactive oxygen radicals are generated. The antioxidant activity increases with the concentration of flavonoids reaching a maximum where pro-oxidative behaviour becomes of importance. The pro-oxidant potency of flavonoids depends on the presence of atmospheric oxygen and follows the order quercetin>rutin>epigallocatechin gallate>catechin.     

Poly(vinyl alcohol)/poly(<Emphasis Type="Italic">N</Emphasis>-isopropylacrylamide) semi-interpenetrating polymer network hydrogels with rapid response to temperature changes

A series of thermosensitive and fast-response poly(vinyl alcohol) (PVA)/poly(N-isopropylacrylamide) (PNIPA) hydrogels were prepared by incorporating PVA into cross-linked PNIPA to form a semi-interpenetrating polymeric network (semi-IPN). Compared to the conventional PNIPA hydrogel, the semi-IPN hydrogels thus prepared exhibit significantly faster response rates and undergo full deswelling in 1 min (lose about 95% water within 1 min) when the temperature is raised above their lower critical solution temperature, and have larger equilibrium swelling ratios at room temperature. These improved properties are attributed to the incorporation of PVA, which forms water-releasing channels and results in increased hydrophilicity, into the PNIPA hydrogel networks.     

How does product isotope effect prove the operation of a two-state "rebound" mechanism in C-H hydroxylation by cytochrome P450?

C-H hydroxylation is a fundamental process. In Nature it is catalyzed by the enzyme cytochrome P450, in a still-debated mechanism that poses a major intellectual challenge for both experiment and theory; currently, the opinions keep swaying between the original single-state rebound mechanism, a two-oxidant mechanism (where ferric peroxide participates as a second oxidant, in addition to the primary active species, the high-valent iron-oxo species), and two-state reactivity (TSR) mechanism (where two spin states are involved). Recent product isotope effect (PIE) measurements for the trans-2-phenyl-methyl cyclopropane probe (1), led Newcomb and co-workers (Newcomb, M.; Aebisher, D.; Shen, R.; Esala, R.; Chandrasena, P.; Hollenberg, P.; Coon, M. J. J. Am. Chem. Soc. 2003, 125, 6064-6065) to rule out TSR in favor of the two-oxidant scenario, since the direction of the PIE was at odds with the one predicted from calculations on methane hydroxylation. The present report describes a density functional theoretical study of C-H hydroxylation of the Newcomb probe, 1, leading to rearranged (3) and unrearranged (2) products. Our study shows that the reaction occurs via TSR in which the high-spin pathway gives dominant rearranged products, whereas the low-spin pathway favors unrearranged products. The calculated PIE(2/3) values based on TSR are found to be in excellent agreement with the experimental data of Newcomb and co-workers. This match between experiment and theory makes a strong case that the reaction occurs via TSR mechanism.     

On the Importance of H-Bonding Interactions in Organic Ammonium Tetrathiotungstates

Four new organic ammonium tetrathiotungstates (N–Me–enH₂)[WS₄] (1), (N,N′-dm-1,3-pnH₂)[WS₄] (2), (1,4-bnH₂)[WS₄] (3), and (mipaH)₂[WS₄] (4), (N–Me–enH₂ = N-methylethylenediammonium, N,N′-dm-1,3-pnH₂ = N,N′-dimethyl-1,3-propanediammonium, 1,4-bnH₂ = 1,4-butanediammonium, and mipaH = monoisopropylammonium) were synthesized by the base promoted cation exchange reaction and characterized by elemental analysis, infrared, Raman, UV-Vis and ¹H NMR spectroscopy as well as single crystal X-ray crystallography. The structures of 1–4 consist of [WS₄]²⁻ tetrahedra which are linked to the organic ammonium cations via N–H⋯S hydrogen bonding. The strength and number of the S⋯H interactions affect the W–S bond lengths as evidenced by distinct short and long W–S bonds. The IR spectra exhibit splitting of the W–S vibrations, which can be attributed to the distortion of the [WS₄]²⁻ tetrahedron. From a comparative study of several known tetrathiotungstates it is observed that a difference of more than 0.033 ? between the longest and shortest W–S bonds in a tetrathiotungstate will result in the splitting of the asymmetric stretching vibration of the W–S bond.     

Determination of methylmercury fluxes across the air–water and air–soil interfaces by gas chromatography with electron capture detection

A method for the determination of methylmercury (MeHg) fluxes across the air–water and air–soil interfaces was developed using an in situ chamber. The MeHg in the air coming out of the chamber was captured by a column containing sulfhydryl cotton fiber adsorbent. MeHg was then desorbed from the column by using 2 mol L^–1 HCl. The MeHg in the effluent was extracted with benzene, and determined by gas chromatography with electron capture detection. Finally, the MeHg flux was calculated using the chamber. The method was applied to simulated experiments, and the results showed that the MeHg fluxes in the air–water system were higher than those in the air–soil–water system. The method was also successfully applied to the field measurements of an environment polluted by a chemical factory, and the results showed that the MeHg fluxes across the air–soil and air–water interfaces were 0.21–3.09 and 0.14–0.79 ng m^–2 h^–1, respectively. The method will be a useful tool in the environmental study of MeHg.     

LC-mass spectrometry analysis of N- and C-terminal boundary sequences of polypeptide fragments by limited proteolysis

Limited proteolysis is an important and widely used method for analyzing the tertiary structure and determining the domain boundaries of proteins. Here we describe a novel method for determining the N- and C-terminal boundary amino acid sequences of products derived from limited proteolysis using semi-specific and/or non-specific enzymes, with mass spectrometry as the only analytical tool. The core of this method is founded on the recognition that cleavage of proteins with non-specific proteases is not random, but patterned. Based on this recognition, we have the ability to determine the sequence of each proteolytic fragment by extracting a common association between data sets containing multiple potential sequences derived from two or more different mass spectral molecular weight measurements. Proteolytic product sequences derived from specific and non-specific enzymes can be accurately determined without resorting to the conventional time-consuming and laborious methods of SDS-PAGE and N-terminal sequencing analysis. Because of the sensitivity of mass spectrometry, multiple transient proteolysis intermediates can also be identified and analyzed by this method, which allows the ability to monitor the progression of proteolysis and thereby gain insight into protein structures.     

The role of esterification on detection of protonated and deprotonated peptide ions in matrix assisted laser desorption/ionization (MALDI) mass spectrometry (MS)

Esterification was used to investigate how introduction of aliphatic chains within the peptide structure affects the MALDI response of ions analyzed in both polarity regimes. In binary mixtures containing equimolar amounts of a peptide with its correspondent alkyl ester, derivatization of the carboxylic groups has the tendency to increase MALDI detection of the modified protonated peptide ions. This positive effect on ion yield is more pronounced when longer alcohols are employed. In negative mode, the situation is antithetic and esterification produces a deleterious effect on the ion yield of the corresponding deprotonated species. From the data reported here we postulate that modifications of the acidic character of peptides prevent formation of anionic species under MALDI analysis. Furthermore, suppression of the formation pathway for anions alters the overall number of molecules which can undergo protonation. This results in an increased ion yield for the protonated esters.     

Analysis of cerebrospinal fluid from patients with psychiatric and neurological disorders by two-dimensional electrophoresis: identification of disease-associated polypeptides as fibrin fragments

Two-dimensional electrophoresis (2-DE) of cerebrospinal fluid (CSF) samples--from 347 patients with various psychiatric and neurological disorders--and subsequent silver staining revealed two additional polypeptides (Mr 40,000) in 49% of 111 schizophrenics, 46% of 43 schizoaffective patients, 36% of 41 patients with affective disorders, 43% of 28 patients with multiple sclerosis, but not in 25 patients without neurological symptomatology, nor in 9 patients with Lues, and in only 2 of 25 patients with AIDS. The two polypeptides, as detected by 2-DE, eluted after size exclusion chromatography in fractions containing proteins with Mr greater than 200,000. After 2-DE of CSF samples, enriched by gel chromatography, the polypeptides were immobilized by blotting onto glass-fiber membranes and subjected to N-terminal sequencing. Polypeptide A was identified as beta-chain remnant (beta 2), derived from plasmin cleavage of fibrin(ogen). After size exclusion chromatography, 2-DE, and Western blotting, polypeptide A and B, as well as several other spots, reacted with fibrinogen antibodies, suggesting that the polypeptides are subunits of a fibrin degradation complex.     

Cycloaddition reactions of 1.3-benzothiazines v synthesis of new tetracyclic ring systems

New tetracyclic derivatives (3a,$\text{b}$, 5, 8) similar to protoberberines, but containing a lactam structural element and other hetero atoms besides the bridge-head nitrogen in rings B and C, were prepared by cycloaddition of 6,7-dimethoxy-2H-1,3-benzothiazine (1a) with $\text{o}$-substituted aromatic carboxylic acid derivatives (2a,$\text{b}$, 4) and from 4- methyl-6,7-dimethoxy-2$\text{H}$-1,3-benzothiazine (1b) with 3.5-dinitrobenzoyl chloride.     

Comparative study of C(2) epimerization of d-glucose and d-mannose catalyzed by water soluble organometallic complexes with nitrogen ligands

Epimerization of d-glucose and d-mannose, catalyzed by the water soluble complexes of Cu(II), Ni(II), Co(II) and Cd(II) with bisnitrogen ligands 4–7, and by Mo(VI) complexes prepared in situ from ammonium heptamolybdate (AHM) with ligands 4–9 is compared. All examined complexes exhibit lower catalytic activity than AHM: strong coordination of the ligands by both (N,O) heteroatoms to metal ions, presumably affords catalytically less active species. Some free ligands and their metal (II) complexes catalyze both C(2) epimerization and isomerization of aldoses to d-fructose.