Interaction of anti-aggregation agent dimethylethylammonium propane sulfonate with acidic fibroblast growth factor

Prevention of aggregation is critical for analyzing protein structure. Non-detergent sulfobetaines (NDSBs) are known to prevent protein aggregation, but the molecular mechanisms of their anti-aggregation effect are poorly understood. To elucidate the underlying mechanisms, we analyzed the effects of dimethylethylammonium propane sulfonate (NDSB-195) on acidic fibroblast growth factor (aFGF). NDSB-195 (0.5M) increased both aggregation and denaturation temperatures of aFGF by 4 degrees C. Chemical shift perturbation analyses indicated that many affected residues were located at the junction between a beta-strand (or 3(10)-helix) and a loop, irrespective of the chemical properties of the residue. The apparent dissociation constants of the interaction ranged from 0.04 to 3M, indicating weak interactions between NDSB and protein molecules.     

Pulsed versus continuous laser multiphoton dissociation of iodobenzene cations

In the two-photon visible dissociation of the iodobenzene cation, laser pulse shape is unimportant when collisional relaxation is slow compared to the time between pulses but becomes important when the relaxation rate is comparable to time between pulses. The dissociation can be simulated using an internal energy-governed computer model.     

Characteristics of voltage holding ratio and residual direct current voltage for polymer-sustained-alignment liquid crystal cells formed from mixed monomers containing biphenyl- and benzilketal-groups

Abstract

For improving process efficiency of polymer-sustained-alignment liquid crystal displays (PSA-LCDs), new photo-initiation monomers (PI-monomers), 2-methoxy-2-methacryloyl-oxy-ethoxy-2-phenylacetophenon (2-MMOEP) and 2,2-dimethacryloyl-oxy-ethoxy-2-phenylacetophenon (2,2-DMOEP), were developed and investigated image sticking characteristics. LC cells having PSA layers formed from a monomer 4,4′-dimethacryloyl-oxy-biphenyl (4,4′-DMABiph) and each PI-monomer were fabricated, and voltage holding ratio (VHR) and residual direct current voltage (V_rDC) were clarified as the image sticking characteristics. The VHR and the V_rDC were improved with the LC cells having the PSA layers formed from 4,4′-DMABiph and 2,2-DMOEP owing to large rate constant of polymerization. In contrast, the VHR and the V_rDC were deteriorated with the LC cells having the PSA layers formed from 4,4′-DMABiph and 2-MMOEP. The deterioration of the VHR and the V_rDC was derived from the increase in the concentration of radical and/or ion generated from 2-MMOEP. The results indicate that the number of polymerizable group in the PI-monomer is important, and plural number of polymerizable group in the PI-monomer leads to high VHR and low V_rDC.     

Substituent effects in selenoxide elimination chemistry

2α-(Arylseleno)cholestan-3-ones (3), 2α-(arylseleno)cholest-4-en-3-ones (4), and 4β-(arylseleno)-24-nor-5β-cholan-3-ones (5) were prepared and their stabilities toward oxidative elimination assessed. Simple competitive experiments demonstrate that electron-withdrawing substituents stabilize arylselenides toward oxidation, while electron-donating groups accelerate the oxidation process. In addition, ab initio and density functional calculations on model systems reveal that selenoxides are relatively insensitive to the nature of substituents on selenium toward elimination, suggesting that the oxidation step is rate-determining during oxidative elimination of selenides. Some results for sulfur and tellurium are also presented.     

Anion-(π)n-π Catalytic Micelles

Anion-π catalysis operates by stabilizing anionic transition states on π-acidic aromatic surfaces. In anion-(π)_n-π catalysis, π stacks add polarizability to strengthen interactions. In search of synthetic methods to extend π stacks beyond the limits of foldamers, the self-assembly of micelles from amphiphilic naphthalenediimides (NDIs) is introduced. To interface substrates and catalysts, charge-transfer complexes with dialkoxynaphthalenes (DANs), a classic in supramolecular chemistry, are installed. In π-stacked micelles, the rates of bioinspired ether cyclizations exceed rates on monomers in organic solvents by far. This is particularly impressive considering that anion-π catalysis in water has been elusive so far. Increasing rates with increasing π acidity of the micelles evince operational anion-(π)_n-π catalysis. At maximal π acidity, autocatalytic behavior emerges. Dependence on position and order in confined micellar space promises access to emergent properties. Anion-(π)_n-π catalytic micelles in water thus expand supramolecular systems catalysis accessible with anion-π interactions with an inspiring topic of general interest and great perspectives.     

Nanoparticle-reinforced associative network hydrogels

ABA triblock copolymers in solvents selective for the midblock are known to form associative micellar gels. We have modified the structure and rheology of ABA triblock copolymer gels comprising poly(lactide)-poly(ethylene oxide)-poly(lactide) (PLA-PEO-PLA) through addition of a clay nanoparticle, laponite. Addition of laponite particles resulted in additional junction points in the gel via adsorption of the PEO corona chains onto the clay surfaces. Rheological measurements showed that this strategy led to a significant enhancement of the gel elastic modulus with small amounts of nanoparticles. Further characterization using small-angle X-ray scattering and dynamic light scattering confirmed that nanoparticles increase the intermicellar attraction and result in aggregation of PLA-PEO-PLA micelles.     

Synthesis of the N-Amykitanosyl Tetramic Acid Moiety of Amycolamicin

An improved five-step synthetic route from l -fucose to an N-glycosyl l -valine methyl ester has been developed. The new route involves glycosidation of l -fucose with phenol in a β-selective manner without protection/deprotection steps and one-pot stereochemical inversion of a secondary alcohol intermediate and is superior to our previous one both in the number of steps and in overall yield. An N-glycosyl l -valine benzyl ester, prepared from l -fucose in an analogous way, has been elaborated into an N-amykitanosyl tetramic acid derivative, Li's synthetic intermediate for amycolamicin, via a four-step sequence which features the utilization of Bestmann's ylide to stereoconvergently construct an N-glycosyl tetramic acid intermediate in a single step, opening of a cyclic carbonate ring with an amine to regioselectively install a carbamate functionality, and visible light-mediated oxidative debenzylation of an N,N-dibenzyl carbamate.     

Synthetic pores with sticky pi-clamps

In this report, we describe design, synthesis, evaluation and molecular dynamics simulations of synthetic multifunctional pores with pi-acidic naphthalenediimide clamps. Experimental evidence is provided for the formation of unstable but inert, heterogeneous and acid-insensitive dynamic tetrameric pores that are sensitive to base and ionic strength. Blockage experiments reveal that the introduction of aromatic electron donor-acceptor interactions provides access to the selective recognition of pi-basic intercalators within the pore. This breakthrough is important for the application of synthetic pores as multianalyte sensors.     

Zipper assembly of photoactive rigid-rod naphthalenediimide pi-stack architectures on gold nanoparticles and gold electrodes

We introduce zipper assembly as a simple and general concept to create complex functional architectures on conducting surfaces. Rigid-rod pi-stack architecture composed of p-oligophenyl rods and blue naphthalenediimide (NDI) stacks is selected as an example. First, short p-quaterphenyl initiators with four anionic NDIs are deposited on gold. Then, long p-octiphenyl propagators with eight cationic NDIs are added. The lower half of the propagator pi-stacks with the initiator, whereas the upper half of the molecule remains free. These cationic sticky-ends zip up with anionic propagators to produce anionic sticky-ends, and so on. Zipper assembly on gold nanoparticles is demonstrated by the appearance of the absorption of face-to-face NDI pi-stacks and the shift of the surface plasmon resonance band with increasing layer thickness. Complete inhibition by zipper capping demonstrates that zipper assembly affords complex architectures that are more ordered than those obtained by conventional layer-by-layer (LBL) approaches. Zipper assembly on gold electrodes produces increasing photocurrents with increasing number of zipped layers. The photocurrents obtained by this method are much higher than those obtained by conventional LBL controls; zipper termination by capping cleanly stops any increase in photocurrent.     

Temperature dependence of oxygen isotope acid fractionation for modern and fossil tooth enamels

The oxygen isotope ratio of CO(2) liberated from structural carbonate in tooth enamel apatite was measured at phosphoric acid reaction temperatures of 25 degrees C, 60 degrees C and 90 degrees C, and it was found that apparent acid fractionation factors for pristine enamel, fossilized enamel, and calcite follow different temperature relationships. Using sealed vessel reactions normalized to alpha(25) = 1.01025 (the fractionation factor for calcite at 25 degrees C), the apparent fractionation factor at 90 degrees C (alpha*(90)) for pristine enamel ranged between 1.00771 and 1.00820, and between 1.00695 and 1.00772 for fossilized enamel. Apparent fractionation factors for common acid bath reactions are similar to those for sealed vessel reactions. A significant correlation exists between alpha*(90) and F(-) content, suggesting that change in the acid fractionation factor may be related to the replacement of OH(-) with F(-) during fossilization of bioapatite. These results have important implications for making accurate comparisons between modern and fossil tooth enamel delta(18)O values, and for the uniformity of isotope data produced in different laboratories using different acid reaction temperatures.