Implicitly representing arrangements of lines or segments

Anarrangement ofn lines (or line segments) in the plane is the partition of the plane defined by these objects. Such an arrangement consists ofO(n ²) regions, calledfaces. In this paper we study the problem of calculating and storing arrangementsimplicitly, using subquadratic space and preprocessing, so that, given any query pointp, we can calculate efficiently the face containingp. First, we consider the case of lines and show that with (n) space¹ and (n ^3/2) preprocessing time, we can answer face queries in (n)+O(K) time, whereK is the output size. (The query time is achieved with high probability.) In the process, we solve three interesting subproblems: (1) given a set ofn points, find a straight-edge spanning tree of these points such that any line intersects only a few edges of the tree, (2) given a simple polygonal path , form a data structure from which we can find the convex hull of any subpath of quickly, and (3) given a set of points, organize them so that the convex hull of their subset lying above a query line can be found quickly. Second, using random sampling, we give a tradeoff between increasing space and decreasing query time. Third, we extend our structure to report faces in an arrangement of line segments in (n ^1/3)+O(K) time, given(n ^4/3) space and (n ^5/3) preprocessing time. Lastly, we note that our techniques allow us to computem faces in an arrangement ofn lines in time (m ^2/3 n ^2/3+n), which is nearly optimal.The first author is pleased to acknowledge the support of Amoco Fnd. Fac. Dev. Comput. Sci. 1-6-44862 and National Science Foundation Grant CCR-8714565. Work on this paper by the fifth author has been supported by Office of Naval Research Grant N00014-87-K-0129, by National Science Foundation Grant NSF-DCR-83-20085, by grants from the Digital Equipment Corporation, and the IBM Corporation, and by a research grant from the NCRD—the Israeli National Council for Research and Development. The sixth author was supported in part by a National Science Foundation Graduate Fellowship. This work was begun while the non-DEC authors were visiting at the DEC Systems Research Center.     

High-tech breakthrough DNA scanner for reading sequence and detecting gene mutation

The 17″×14″ X-ray film, gels, and blots are widely used in DNA research. However, DNA laser scanners are costly and unaffordable for the majority of surveyed biotech scientists who need it. The high-tech breakthrough analytical personal scanner (PS) presented in this report is an inexpensive 1 lb hand-held scanner priced at 2–4% of the bulky and costly 30–95 lb conventional laser scanners. This PS scanner is affordable from an operation budget and biotechnologists, who originate most science breakthroughs, can acquire it to enhance their speed, accuracy, and productivity. Compared to conventional laser scanners that are currently available only through hard-to-get capital-equipment budgets, the new PS scanner offers improved spatial resolution of 20 μm, higher speed (scan up to 17″×14″ molecular X-ray film in 48 s), 1–32,768 gray levels (16-bits), student routines, versatility, and, most important affordability. Its programs image the film, read DNA sequences automatically, and detect gene mutation. In parallel to the wide laboratory use of PC computers instead of mainframes, this PS scanner might become an integral part of a PC-PS powerful and cost-effective system where the PS performs the digital imaging and the PC acts on the data.     

An Eclipsed C(sp3)-CH3 Bond in a Crystalline Hydrated Tricyclic Orthoamide: Evidence for C?H…︁O hydrogen bonds

Accurate, low-temperature (81 K) X-ray analyses have been made for two crystalline modifications of the tricyclic orthoamide 1b : a cubic trihydrate in space group Pa3 (Z = 8), where the molecule has crystallographic threefold rotation symmetry, and an anhydrous monoclinic form in space group P2₁/c (Z = 8) where two symmetry-independent molecules have different configurations, one ail-trans. (as in the cubic trihydrate), the other cis, cis, trans. In the cubic trihydrate, each orthoamide molecule is attached to a triad of H₂o molecules by OH…?N H-bonds. A remarkable feature of this structure is the nearly eclipsed conformation about the central C-CH₃ bond. In the anhydrous crystal, both types of molecule have the normal staggered orientation of their Me groups. The reversal of the Me orientation in the trihydrate is attributed to C? H…?O H-bonding, which must be much stronger and more directionally specific than has been previously assumed.     

X-Ray Study of the Deformation Density in Tetrafluoroterephthalodinitrile: Weak Bonding Density in the C,F-Bond

A careful deformation density study of tetrafluoroterephthalodinitrile at 98K has been made from X-ray diffraction measurements. Prominent ‘bonding density’ peaks are found at or near the mid-points of the C, C- and C, N-bonds but not for the C, F-bonds, which show only weak density. Similarly weak bonding densities for C, F-bonds are also found for 1, 1, 4, 4-tetrafluorocyclohexane. The possible significance of these results in terms of bonding theory is briefly discussed.     

Photochemical reactions of Ru3(CO)12 involving metalmetal bond fission

Photolysis of Ru₃(CO)₁₂ in the presence of donor ligands rapidly produces monomeric ruthenium species.     

Surface modification of surface sol-gel derived titanium oxide films by self-assembled monolayers (SAMs) and non-specific protein adsorption studies

Biological events occurring at the implant-host interface, including protein adsorption are mainly influenced by surface properties of the implant. Titanium alloys, one of the most widely used implants, has shown good biocompatibility primarily through its surface oxide. In this study, a surface sol-gel process based on the surface reaction of metal alkoxides with a hydroxylated surface was used to prepare ultrathin titanium oxide (TiOx) coatings on silicon wafers. The oxide deposited on the surface was then modified by self-assembled monolayers (SAMs) of silanes with different functional groups. Interesting surface morphology trends and protein adhesion properties of the modified titanium oxide surfaces were observed as studied by non-specific protein binding of serum albumin. The surface properties were investigated systematically using water contact angle, ellipsometry, X-ray photoelectron spectroscopy (XPS), and atomic force microscopy (AFM) measurements. Results showed that the surface sol-gel process predominantly formed homogeneous, but rough and porous titanium oxide layers. The protein adsorption was dependent primarily on the silane chemistry, packing of the alkyl chains (extent of van der Waals interaction), morphology (porosity and roughness), and wettability of the sol-gel oxide. Comparison was made with a thermally evaporated TiOx-Ti/Si-wafer substrate (control). This method further extends the functionalization of surface sol-gel derived TiOx layers for possible titanium alloy bioimplant surface modification.     

Field-portable, high-speed GC/TOFMS

This work is focused on developing a fast gas chromatograph, time-of-flight mass spectrometer (GC/TOFMS) for man-portable field use. The goal is to achieve a total system solution for meeting performance, size, weight, power, cost, and ruggedness requirements for a laboratory in the field. The core technology will also be adaptable to specific applications including real-time point detection for hazardous chemical releases (e.g., chemical weapons), for biological agent signature identification, and for mobile monitoring platforms (e.g., air, ship, truck). Previously we presented results of a feasibility demonstration for a 30-lb field-portable TOFMS system. In this work we present recent progress in integrating a low-power, high-speed GC and show the capability for accurately recording fast GC transients for targeted compound detection using a quadrupole ion trap, time-of-flight instrument (QitTof).     

Non-radiative decay processes in isolated SO2 molecules excited within the first allowed absorption band (2500–3200 Å)

New and previously published SO₂ fluorescence emission data related to non-radiative decay processes are considered in light of the recent observations of Brus and McDonald. All the present data are consistent with the previous conclusion of Mettee that non-radiative processes in SO₂ singlet photochemistry are unimportant. It appears that any small inefficiency in the emission of light quanta for SO₂ excited at short wavelengths (2650 A) is largely due to the population of a second very short-lived state which is quenched effectively even at pressures down to 1 μ. The very low efficiency of quanta production which we observed at long wavelengths (3020 Å) appears to have its origin not only in the second easily quenched state, but more importantly, in the diffusional loss of the long-lived singlet which for these conditions has a 20-fold greated lifetime than was expected previously.     

On the synthesis of pyrinodemin A. Part 1: The location of the olefin

The elucidation of the structure of the cytotoxic marine sponge alkaloid pyrinodemin A by synthesis is described. Based on the ¹³C NMR spectra of three double bond positional isomers and the natural product, it is concluded the C14′-C15′ isomer best represents the true structure of pyrinodemin A. In addition, the structural assignment of pyrinodemin C is evaluated.