Molecular alignment of biphenyl derivatives -a computational analysis

Molecular alignment of some biphenyl derivatives likes 4'-Nitro-2-biphenylamine (NBPA), 4-Acetyl-3'-chlorobiphenyl (ACBP) and 4-Acetyl-3'-florobiphenyl (AFBP) has been examined. The CNDO/2 method has been employed to compute the net atomic charge and atomic dipole-moment components at each atomic centre. Configurational energy has been computed using a modified Rayleigh- Schrodinger perturbation method at an interval of 0.1 A° in translation and 1° in rotation, and corresponding probabilities have been calculated using MB-statistics. A comparative study of molecular parameters like the total energy, the binding energy and the total dipole moment etc., has been made. On the basis of the stacking and the in-plane interaction energy calculations, all the possible geometrical arrangements between molecular pairing have been obtained. The investigation suggests that a strong intermolecular interaction energy between a pair of NBPA molecules, and the specific minimum energy configuration, determines the alignment of molecules with respect to one another. An attempt has been made to correlate the liquid crystalline properties exhibited by this class of molecules, and thereby develop a molecular model for the liquid crystallinity.     

Molecular ordering of Fluoro-Nematogen in a dielectric medium at phase-transition temperature: a statistical–mechanical approach based on computer simulation

A molecular-ordering study of p-phenylene-4-methoxy benzoyl 4-trifluoromethylbenzoate (FLUORO) in a dielectric medium (benzene) has been carried out on the basis of statistical mechanics and computer simulation. The atomic net charge and atomic dipole moment at each atomic centre has been evaluated using the CNDO/2 method. The modified Rayleigh–Schrodinger perturbation theory with multicentered–multipole expansion method has been employed to evaluate the long-range intermolecular interactions, while ‘6-exp’ potential function has been assumed for the short-range interactions. The total interaction energy values obtained through these computations were used to calculate the probability of each configuration in a dielectric medium at the phase-transition temperature (506?K), using the MB-formula. The flexibility of various interacting configurations was studied in terms of variation of probability due to departure from the most probable configuration. It has been observed that in dielectric medium the energies/probabilities are redistributed, and there is considerable rise in the probability of interaction, although the order of preference remains the same. The results are discussed in the light of experimental observations.     

Nematic Behavior of 5OCB in a Dielectric Medium at Phase Transition Temperature ‐A Statistical Analysis

A statistical analysis has been carried out to determine the configurationally preference of a pair of 5OCB (4′‐n‐pentyloxy‐4‐biphenylcarbonitrile) molecules with respect to translatory and orientational motions. The CNDO/2 method has been employed to evaluate the net atomic charge and atomic dipole components at each atomic centre of the molecule. Modified Rayleigh‐Schrodinger perturbation theory along with multicentered‐multipole expansion method has been employed to evaluate long‐range intermolecular interactions, while a ‘6‐exp’ potential function has been assumed for short‐range interactions. The total interaction energy values obtained through these computations were used to calculate the probability of each configuration in vacuum and in a dielectric medium at phase transition temperature using Maxwell‐Boltzmann formula. It has been observed that the probabilities are redistributed in dielectric medium and there is considerable rise in the probabilities of interactions, although the order of preference remains the same. On the basis of stacking, in‐plane and terminal interaction energy calculations, all possible geometrical arrangements of the molecular pairs have been considered. The results are discussed in the light of experimental as well as other theoretical observations.     

Statistical Study of Molecular Ordering in a Nematogenic Compound – A Computational Analysis

A computational Analysis has been carried out to determine the configurational preference of a pair of a nematogen, 4,4′‐azodiphenetole (C₂H₅‐O‐C₆H₄‐N=N‐C₆H₄‐O‐C₂H₅) [AZO] molecules with respect to translatory and orientational motions. The CNDO/2 method has been employed to compute the atomic charge and atomic dipole at each atomic centre. Configurational energy has been computed using modified Rayleigh‐Schrodinger perturbation method. The interaction energy values obtained through these computations were used to calculate the probability of each configuration at phase transition temperature using Maxwell‐Boltzmann formula. Further, the flexibility of various configurations has been studied in terms of variation of probability due to small departures from the most probable configuration. Molecular parameters like total energy, binding energy and total dipole moment have been given. Results have been discussed in the light of experimental as well as other theoretical observations.     

Inter- and Intra-Molecular Hydrogen Bonding in Bis(2-amino-5-fluoro-3-methylphenyl)disulfide

Abstract  Bis(2-amino-5-fluoro-3-methylphenyl)disulfide was obtained by oxidation of 2-amino-5-fluoro-3-methylbenzenethiol and was characterized by elemental analysis, IR and ¹H-NMR spectroscopy. The X-ray structure was determined. Crystal data: C₁₄H₁₄N₂F₂S₂: Monoclinic, P2₁ /n, a = 11.8268(3), b = 9.5770(3), c = 12.3977(3) ?, β = 98.079(2)°, V = 1390.29(7) ?, Z = 4. The supramolecular structure arises because the NH₂ groups form three center S···H···F hydrogen bonds and two center N–H···F and N–H···S hydrogen bonds. Index Abstract  Inter- and Intra-Molecular Hydrogen Bonding in Bis(2-amino-5-fluoro-3-methylphenyl)disulfide J. E. Drake¹, M. B. Hursthouse², M. E. Light², R. Maheshwari³, K.G. Ojha³, R. Ratnani^3* Bis(2-amino-5-fluoro-3-methylphenyl)disulfide is linked into a three-dimensional frame work by a combination of intermolecular N–H···F and N–H···N and intramolecular N–H···S hydrogen bonds. The supramolecular structure arises because the NH₂ groups form three center S···H···F hydrogen bonds and two center N–H···F and N–H···S hydrogen bonds.      

Nonlinear transmission and reflection characteristics of plasma/polystyrene one dimensional photonic crystal

Reflection and transmission properties of one-dimensional plasma/polystyrene nonlinear photonic crystal have been investigated theoretically. Reflectance and transmitted amplitude of electromagnetic waves through these periodic multilayered structures are calculated for different intensities of controlling wave. It is found that the reflectance of the proposed structures depends on the intensity of the controlling wave and this property can be exploited in the design of WDM coupler, filter, optical logic gates, etc.     

Broadening of omni-directional reflection range in 1-d photonic crystal by using photonic quantum well structures

In the present communication, it is shown that it is possible to enlarge of omni-directional reflection (ODR) range in one-dimensional photonic crystals by using photonic quantum well structures. This photonic quantum well structure consists of different one dimensional photonic crystals. We propose air/(AB)₆/(AC)_n/(AB)₆/substrate(SiO₂) structure, where A, B and C are different materials. By choosing appropriate values of controlling parameters and the value of n, we can enhance the ODR range. Also, we can tune the ODR range to a desired wavelength region.     

FTIR and FT‐Raman spectra and density functional computations of the vibrational spectra,molecular geometry and atomic charges of the biomolecule: 5‐bromouracil

FTIR and FT‐Raman spectra of 5‐bromouracil in the powder form were recorded in the region 400–4000 cm⁻¹ and 50–4000 cm⁻¹, respectively. The observed wavenumbers were analysed and assigned to different normal modes of vibration of the molecule. Quantum chemical calculations were performed to support the assignments of the observed wavenumbers. The performance of the B3LYP hybrid density functional (DFT) method was compared with other methods. With the 6–31 G** and 6–311 + G(2d,p) basis sets, the calculated geometry, dipole moments and harmonic vibrations were determined. A comparison with the uracil molecule was made, and specific scale factors were deduced and employed in the predicted wavenumbers of 5‐bromouracil. The total atomic charges and thermodynamic parameters were calculated, and are discussed briefly. Structure and harmonic vibrations of 5‐bromouracil were also calculated in the presence of water within a simple model with one molecule. It is observed that the bromine atom at position 5 exhibits smaller inductive effects than the fluorine atom, producing a small distortion of the electrostatic potential around the ring and a reduction of the molecular dipole moment. Copyright © 2007 John Wiley & Sons, Ltd.     

Working group report: Collider Physics

This is summary of the activities of the working group on collider physics in the IXth Workshop on High Energy Physics Phenomenology (WHEPP-9) held at the Institute of Physics, Bhubaneswar, India in January 2006. Some of the work subsequently done on these problems by the subgroups formed during the workshop is included in this report.