The future of laboratory automation urgency, technology and strategy

The commercial application of laboratory robotics is entering its eight year. Developments in general purpose computer and software technology combined with developments in laboratory robotics have contributed to significant improvements in performance, reliability, and ease-of-use. The need for high quality laboratory automation continues to increase. Competitive pressure for higher quality and lower cost products and the shrinking supply of qualified technical people demands more effective use of our people resources. This presentation will develop the need for a new role and broader contribution from automation to the laboratory of the future. Specifically, I will discuss the critical decrease in the number of young people embarking on careers in chemistry and science and how automation can help make these career opportunities more challenging and exciting. The second part of the presentation will discuss the evolution of laboratory robotics technology and project some of the trends ahead.     

Synthesis of PI3K inhibitor GDC-0077 via a stereocontrolled N-arylation of α-amino acids

An efficient synthesis of PI3K inhibitor GDC-0077, featuring two consecutive Cu-catalyzed CN coupling reactions, is reported. The described synthetic route involves a chemoselective Ullmann-type coupling of a chiral difluoromethyl-substituted oxazolidinone, a Cu-catalyzed N-arylation of l-alanine with high stereochemical integrity, and a high-yielding final amide bond formation step to produce GDC-0077 in >99.5 area % HPLC purity.     

New heterodimetallic cyclopentadienyl carbonyl complexes: crystal structure of (C5Me4Et)(μ-CO)3Ru(C5Me5)

A series of heterodimetallic complexes of general formula (C₅R₅)M(μ-CO)₃RuC₅Me₅ (M = Cr, Mo, W; R = Me, Et) has been prepared in good yields by the reaction of [C₅R₅M(CO)₃]⁻ with [C₅Me₅Ru(CH₃CN)₃]⁺. (C₅Me₄Et)W(μ-CO)₃Ru(C₅Me₅) was characterized by a crystal structure determination. The W---Ru bond length of 2.41 Å is consistent with the formulation of a metal-metal triple bond, while the unsymmetrical bonding mode of the three bridging carbonyl groups reflects the inherent non-equivalence of the two different C₅R₅M-units. Using [CpRu(CH₃CN)₃]⁺ or [CpRu(CO)₂(CH₃CN)]⁺ as the cationic precursor leads to the formation of dimetallic species (C₅R₅)M(CO)₅RuC₅H₅ with both bridging and terminal carbonyl groups.     

Singlet quenching of tetraphenylporphyrin and its metal derivatives by iron(III) coordination compounds

The quenching of fluorescence of the free-base tetraphenylporphyrin, H₂TPP, and its metal derivatives, MgTPP and ZnTPP by diverse iron(III) complexes, [Fe(CN)₆]³⁻, Fe(acac)₃, [Fe(mnt)₂]⁻, Fe(Salen)Cl, [Fe₄S₄(SPh)₄]²⁻·, FeTPPCl and [Fe(Cp)₂]⁺ has been studied both in homogeneous medium (CH₃CN) and micellar media, SDS., CTAB and Triton X-100. The quenching efficiencies are analysed in terms of diffusional encounters and it has been possible to separate static quenching components. The quenching constants are dependent on the nature of the ligating atoms around iron(III) and also on the extent of π-conjugation of the ligands. The quenching mechanism has been investigated using steady-state irradiation experiments. Evidence for oxidative quenching by iron(III) complexes was obtained, though the spin multiplicities of the excited electronic states of iron(III) complexes permit both energy and electron transfer mechanisms for quenching of the singlet excited state of the porphyrins.     

Synthesis and anti-tetrabenazine activity of c-3 analogues of dimethyl-2-phenylmorpholines

A series of analogues of 2-phenylmorpholines with alkyl substituents at the C-3 position were synthesized for anti-tetrabenazine (anti-TBZ) testing in mice. The target compounds were prepared by reaction of (2-bromoalkyl) phenyl ketones 21a-h with the appropriate aminoalcohol 20a-b to form morpholinols 22a-h . Hydride reduction of the morpholinols gave aminodiols 23a-h which were cyclized to morpholines 6, 8, 10–12, 14–16, 18 and 19 by acid catalaysis. Compounds 7, 9, 13 and 17 were prepared by reductive formylation. The smaller straight chain substituents of 6, 8, 12 and 15 , and the beta branching of the iso-butyl group of 16 were well tolerated; anti-tetrabenazine ED_50′s were comparable to compounds 2–5 . The α-branched, N-methylated, and side chain aryl derivatives were less active.     

Crystal thickness distributions from melting homopolymers or random copolymers

Differential scanning calorimetry (DSC) can be used to infer the distribution of lamellar crystal thickness l. For homopolymers, the relation between melting temperature T and thickness is described by the Gibbs relation. In this case the weight distribution function of thickness g(l) ∝ P(T)(T − T)², where P(T) is DSC power and T is the melting temperature of an infinitely thick crystal. Copolymer melting is affected by the concentration of noncrystallizable comonomer in the melt as well as lamellar thickness. Unknown melt composition in copolymers with nonequilibrium crystallinity makes determination of the correct distribution g(l) from DSC impossible. An approximate distribution g₂(l) ∝ P(T)(T − T)² is proposed, where T is based on Flory's equilibrium crystallization theory. This approximate distribution is most accurate when crystallinity is small, that is, near the upper end of the melting range. Results are reported for polyethylene homopolymer and model ethylene–butene random copolymers. Corrections were not made for distortion of the DSC endotherms by thermal lag or by melting and recrystallization; these experiments are primarily to illustrate the effect of analysis in terms of an incorrect g₃(l) ∝ P(T). Average crystal thicknesses are about 20 nm for polyethylene and 5 nm for the copolymers. Distributions are characterized by l_w /l_n ≤ 1.1 in all cases. Width of the melting range is not a reliable indicator of the breadth of the thickness distribution. © 1999 John Wiley & Sons, Inc. J Polym Sci B: Polym Phys 37: 3131–3140, 1999     

Synthesis of pyrazolidine, 1-pyrazoline, 2-pyrazoline derivatives by selenium-induced cyclization of homoallylhydrazines

The PhSeBr-induced cyclization of N′-but-3-en-1-yl ethoxycarbonylhydrazines 1, phenylhydrazines 2 and dimethylhydrazines 3 has been studied. A 5-exo-trig ring closure occurred in each case and phenylselanylmethyl-pyrazolidines 4, 2-pyrazolines 5 and 10, 1-pyrazolines 8 and pyrazolidinium bromides 11 were synthesized. Radical deselenenylation has allowed the preparation of 5-methylpyrazolidines 12 and 5-methyl-2-pyrazolines 13 and 14. Decomposition of the dibromoselenuranes derived from 2-pyrazolines 5 and 10 afforded bromomethyl derivatives. With 1-phenyl-2-pyrazolines 10, an electrophilic p-halogenation of the phenyl nucleus was observed.     

Photosensitized Generation of Singlet Oxygen from (Substituted Bipyridine)ruthenium(II) Complexes

Photophysical properties in dilute MeCN solution are reported for seven Ru^II complexes containing two 2,2′‐bipyridine (bpy) ligands and different third ligands, six of which contain a variety of 4,4′‐carboxamide‐disubstituted 2,2′‐bipyridines, for one complex containing no 2,2′‐bipyridine, but 2 of these different ligands, for three multinuclear Ru^II complexes containing 2 or 4 [Ru(bpy)₂] moieties and also coordinated via 4,4′‐carboxamide‐disubstituted 2,2′‐bipyridine ligands, and for the complex [(Ru(bpy)₂(L)]²⁺ where L is N,N′‐([2,2′‐bipyridine]‐4,4′‐diyl)bis[3‐methoxypropanamide]. Absorption maxima are red‐shifted with respect to [Ru(bpy)₃]²⁺, as are phosphorescence maxima which vary from 622 to 656 nm. The lifetimes of the lowest excited triplet metal‐to‐ligand charge transfer states ³MLCT in de‐aerated MeCN are equal to or longer than for [Ru(bpy)₃]²⁺ and vary considerably, i.e., from 0.86 to 1.71 μs. Rate constants k_q for quenching by O₂ of the ³MLCT states were measured and found to be well below diffusion‐controlled, ranging from 1.2 to 2.0⋅10⁹ dm³ mol⁻¹ s⁻¹. The efficiencies f of singlet‐oxygen formation during oxygen quenching of these ³MLCT states are relatively high, namely 0.53 – 0.89. The product of k_q and f gives the net rate constant k for quenching due to energy transfer to produce singlet oxygen, and k_q−k equals k, the net rate constant for quenching due to energy dissipation of the excited ³MLCT states without energy transfer. The quenching rate constants were both found to correlate with ΔG^CT, the free‐energy change for charge transfer from the excited Ru complex to oxygen, and the relative and absolute values of these rate constants are discussed.     

Synthesis and antifolate activity of 8,10-dideazaminopterin

A synthesis of 8,10-dideazaminopterin, using 2,4-diamino-6-bromomethyl-8-deazapteridine ( 2 ) as a key intermediate, is described. Condensation of the triphenylphosphinylide derived from 2 with p-formylbenzoyl-L-glutamate afforded a 9,10-dehydro-8,10-dideazaminopterin ester intermediate 5 . Hydrogenation of the olefinic linkage and subsequent hydrolysis of the glutamate ester gave the title compound. 8,10-Dideazaminopterin was a potent growth inhibitor of folate dependent bacteria. It was 16 times more potent then methotrexate as an inhibitor of dihydrofolate reductase derived from L1210 leukemia cells, and showed strong activity against L1210 in mice.