Comprehensive analysis of chemical bonding in boron clusters

We present a comprehensive analysis of chemical bonding in pure boron clusters. It is now established in joint experimental and theoretical studies that pure boron clusters are planar or quasi-planar at least up to twenty atoms. Their planarity or quasi-planarity was usually discussed in terms of pi-delocalization or pi-aromaticity. In the current article, we demonstrated that one cannot ignore sigma-electrons and that the presence of two-center two-electron (2c--2e) peripheral B--B bonds together with the globally delocalized sigma-electrons must be taken into consideration when the shape of pure boron cluster is discussed. The global aromaticity (or global antiaromaticity) can be assigned on the basis of the 4n+2 (or 4n) electron counting rule for either pi- or sigma-electrons in the planar structures. We showed that pure boron clusters could have double (sigma- and pi-) aromaticity (B3-, B4, B5+, B6(2+), B7+, B7-, B8, B(8)2-, B9-, B10, B11+, B12, and B13+), double (sigma- and pi-) antiaromaticity (B6(2-), B15), or conflicting aromaticity (B5-,sigma-antiaromatic and pi-aromatic and B14, sigma-aromatic and pi-antiaromatic). Appropriate geometric fit is also an essential factor, which determines the shape of the most stable structures. In all the boron clusters considered here, the peripheral atoms form planar cycles. Peripheral 2c--2e B--B bonds are built up from s to p hybrid atomic orbitals and this enforces the planarity of the cycle. If the given number of central atoms (1, 2, 3, or 4) can perfectly fit the central cavity then the overall structure is planar. Otherwise, central atoms come out of the plane of the cycle and the overall structure is quasi-planar.     

On the chemical bonding of gold in auro-boron oxide clusters AunBO- (n = 1-3)

During experiment on Au-B alloy clusters, an auro-boron oxide cluster Au2BO- was observed to be an intense peak dominating the Au-B mass spectra, along with weaker signals for AuBO- and Au3BO-. Well-resolved photoelectron spectra have been obtained for the three new oxide clusters, which exhibit an odd-even effect in electron affinities. Au2BO- is shown to be a closed shell molecule with a very high electron detachment energy, whereas AuBO and Au3BO neutrals are shown to be closed shell species with large HOMO-LUMO gaps, resulting in relatively low electron affinities. Density functional calculations were performed for both AunBO- (n = 1-3) and the corresponding HnBO- species to evaluate the analogy between bonding of gold and hydrogen in these clusters. The combination of experiment and theory allowed us to establish the structures and chemical bonding of these tertiary clusters. We find that the first gold atom does mimic hydrogen and interacts with the BO unit to produce a linear AuBO structure. This unit preserves its identity when interacting with additional gold atoms: a linear Au-[AuBO] complex is formed when adding one extra Au atom and two isomeric Au2-[AuBO] complexes are formed when adding two extra Au atoms. Since BO- is isoelectronic to CO, the AunBO- species can be alternatively viewed as Aun interacting with a BO- unit. The structures and chemical bonding in AunBO- are compared to those in the corresponding AunCO complexes.     

Interaction between explosive and analyte layers in explosive matrix-assisted plasma desorption mass spectrometry

An HMX/insulin two-layer system was chosen as a model for further investigation of the matrix properties of explosive materials for protein analytes in plasma desorption mass spectrometry. The dependencies of the molecular ion yield and average charge state as a function of the analyte thickness were studied. An increase in the charge state of multiply protonated molecular species was confirmed as the major matrix effect, with the average charge state z at the smallest thickness studied being higher than in matrix-assisted laser desorption/ionization and closer to the value obtained in electrospray ionization under standard acidic conditions. Observed charge state distributions are significantly narrower than the corresponding Poisson distributions, which suggests that the protonation of insulin is limited in plasma desorption by the number of basic sites in the molecule, similar to electrospray ionization. Both the curve displaying total molecular ion yield and the one showing the total charge (proton) yield as a function of the insulin thickness have maxima at a thickness different from an insulin monolayer. These observations diminish the significance of a matrix/analyte interface mechanism for the explosive matrix assistance. Instead, a mechanism related to the chemical energy release during conversion of the explosive after the ion impact is proposed. As additional mechanisms, enhanced protonation of the analyte through collisions with products of the explosive decay is considered, as well as electron scavenging by other products, which leads to a higher survival probability of positively charged protein molecular ions. Copyright 1999 John Wiley & Sons, Ltd.     

Intramolecular hydrogen atom transfer in hydrogen-deficient polypeptide radical cations

Irradiation of protonated polypeptides NH₂–RH⁺–COOH by >10 eV electrons leads to further ionization and fast intramolecular charge transfer to the free N-terminus. The resulting species may undergo further hydrogen atom rearrangement to form distonic ions N⁺H₃–RH⁺–COO√. Such transfer is exothermic but can involve an appreciable barrier, e.g., 2.3±0.5 eV for MH^2+√ ions of the peptide ACTH 1–10. Radical polypeptide dications can, therefore, be viewed as hydrogen atom wires. Subsequent capture of low energy electrons results in fragmentation. The pattern of this electronic excitation dissociation (EED) is consistent with hydrogen transfer prior to electron capture.     

Gram-Scale Synthesis of Isolated Monodisperse Gold Nanorods

Although gold nanorods (AuNRs) have strong potential applications in nanotechnology, plasmonics, and sensing, the scale-up synthesis of isolated AuNRs in gram quantities remains a challenge. Nearly all previously reported methods produce aqueous solutions of cetyltrimethylammonium bromide (CTAB)-coated AuNRs in milligram quantities with yields of approximately 20–30 % in terms of Au^I to Au⁰ conversion. In addition, it is difficult to remove the CTAB bilayer from the surface of AuNRs and yet make them soluble and functionalized for further processing and chemical modification. This report describes the synthesis of monodisperse functionalized AuNRs (standard deviation, σ≈5 %) in gram quantities. Our approach involved increasing the concentration of HAuCl₄ ⋅ 3 H₂O in the growth solution to produce larger quantities of starting AuNRs and further reducing the remaining Au^I ions onto the surface of AuNRs. The slow and controlled addition of ascorbic acid as a reducing agent continued the conversion of Au^I into Au⁰ (through a disproportionation reaction) onto the surface of the nanorods, which maintained their uniform morphology without creating any unwanted impurities of various shapes. In addition, this approach significantly narrowed the size distribution owing to continuous growth of the partially grown AuNRs during the initial stage of the synthesis. To isolate a 1 g quantity of the AuNRs and to make them functionalized for further chemical reactions, a ligand-exchange approach was utilized, in which the CTAB surfactant was replaced with 4-mercaptophenol. The thiol group from 4-mercaptophenol formed a covalent bond with the surface of the AuNRs, leaving free functional OH groups available for further chemical coupling reactions. For the ligand-exchange process, a concentrated solution of 4-mercaptophenol in tetrahydrofuran solution was introduced into the AuNRs solution. Pure AuNRs functionalized with 4-mercaptophenol were isolated by dispersion and rinsing with an excess amount of THF, followed by centrifugation.     

Electron capture dissociation of singly and multiply phosphorylated peptides

Analysis of phosphotyrosine and phosphoserine containing peptides by nano-electrospray Fourier transform ion cyclotron resonance (FTICR) mass spectrometry established electron capture dissociation (ECD) as a viable method for phosphopeptide sequencing. In general, ECD spectra of synthetic and native phosphopeptides appeared less complex than conventional collision activated dissociation (CAD) mass spectra of these species. ECD of multiply protonated phosphopeptide ions generated mainly c- and z(.)-type peptide fragment ion series. No loss of water, phosphate groups or phosphoric acid from intact phosphopeptide ions nor from the c and z(.) fragment ion products was observed in the ECD spectra. ECD enabled complete or near-complete amino acid sequencing of phosphopeptides for the assignment of up to four phosphorylation sites in peptides in the mass range 1400 to 3500 Da. Nano-scale Fe(III)-affinity chromatography combined with nano-electrospray FTMS/ECD facilitated phosphopeptide analysis and amino acid sequencing from crude proteolytic peptide mixtures.     

Nonlinear waves on the surface of a dielectric liquid in a horizontal electric field in 3D geometry: Exact solutions

It has been shown that waves of arbitrary configuration in 3D geometry may propagate without distortion along the surface of a dielectric liquid in the direction of a horizontal electric field. This situation occurs for the high-permittivity liquids in the case of a sufficiently high external field when the effect of electrostatic forces dominates. A general solution of the equations of motion that describes the interaction of counterpropagating waves of a small but finite amplitude has been obtained.     

Theoretical probing of deltahedral closo-auroboranes B(x)Au(x)2- (x = 5-12)

Using density functional theory calculations, here we show that a series of B(x)Au(x)2- (x = 5-12) dianions possesses structure and bonding similar to the famous deltahedral closo-borane cages, B(x)H(x)2-. Effective atomic charges on Au in B(x)Au(x)2- are very similar to those on H in B(x)H(x)2-, indicating that Au in the closo-auroboranes is indeed analogous to H in the closo-boranes. The present theoretical predictions of B(x)Au(x)2- suggest that the closo-auroborane species are viable new chemical building blocks that may be synthesized in bulk. The Au atoms in the closo-auroboranes represent highly atomically dispersed Au and may potentially exhibit novel catalytic and chemical properties.     

On the mobility of a very pure semiconductor including the low impurity concentration limit

The low temperature mobility μ limited by charged impurities is calculated by solving the equation for the relaxation rate previously derived. The calculated μ behaves like $\text{μ = 2.03 κ}{}^2\text{(k}{}_{\mathrm{B}}\text{T)}{}^{\mathrm{<mtext>3</mtext><mtext>2</mtext>}}\text{e}{}^{\mathrm{?3}}\text{z}{}^{\mathrm{?2}}\text{n}{}_{\mathrm{s}}{}^{\mathrm{?1}}\text{m}{}^{\mathrm{<mtext>1</mtext><mtext>?1</mtext><mtext>2</mtext>}}$ In $\text{[38.2κ}{}^2\text{m}{}^{\mathrm{<mtext>1</mtext><mtext>1</mtext><mtext>2</mtext>}}\text{(k}{}_{\mathrm{B}}\text{T)}{}^{\mathrm{<mtext>5</mtext><mtext>2</mtext>}}\text{/z}{}^2\text{e}{}^4\text{h}\text{?}\text{n}{}_{\mathrm{s}}\text{]}$ for lowest concentrations n_s<10¹¹cm^?3 for Ge and

$\text{μ = 0.360}\text{h}\text{?}{}^{\mathrm{<mtext>1</mtext><mtext>2</mtext>}}\text{κ(k}{}_{\mathrm{B}}\text{T)}{}^{\mathrm{<mtext>1</mtext><mtext>4</mtext>}}\text{(ze)}{}^{\mathrm{?1}}\text{n}{}_{\mathrm{s}}{}^{\mathrm{<mtext>?1</mtext><mtext>2</mtext>}}\text{m}{}^{\mathrm{<mtext>1</mtext><mtext>?3</mtext><mtext>4</mtext>}}$

for intermediate concentrations n_s ～ 10¹²?10¹⁴cm^?3.