Morphological variation in the oral disc of the scleractinian coral Favia speciosa (Dana) at Indonesia

Photographic analysis was used to examine morphological differences in the oral disc of n=1196 living polyps of Favia speciosa Dana (1846) sampled from four sites in the Wakatobi Marine National Park, Indonesia. Although oral disc size attributes differed significantly between the study sites, the geographic difference accounted for only a small fraction of the morphological variation and did not show a clear pattern of correspondence to sedimentation rates. A much higher fraction of the morphological variation was attributed to depth and so to incident light: oral discs grew significantly larger with increasing depth. These results suggest that for F. speciosa corals at Wakatobi, oral disc size may be optimised for heterotrophic nutrition under low light conditions, and photosynthesis in conditions where light is not limiting. Furthermore, the driving force for this phenotypic plasticity is more likely to be depth than sedimentation rate.     

Multichannel selective femtosecond coherent control based on symmetry properties

We present and implement a new scheme for extended multichannel selective femtosecond coherent control based on symmetry properties of the excitation channels. Here, an atomic nonresonant two-photon absorption channel is coherently incorporated in a resonance-mediated (2+1) three-photon absorption channel. By proper pulse shaping, utilizing the invariance of the two-photon absorption to specific phase transformations of the pulse, the three-photon absorption is tuned independently over an order-of-magnitude yield range for any possible two-photon absorption yield. Noticeable is a set of "two-photon dark pulses" inducing widely tunable three-photon absorption.     

Studies on the mass spectra of 6-methylthiopurine and its C-and N-methyl derivatives

6-Methylthiopurines which bear a 9-NH- or a 9-NCH₃-group (class A) form an [M—1]-ion with much higher abundance than do the 1-, 3-, or 7-methyl derivatives (class B). The higher stability of the [M—1]-ion in class A may be explained by ring closure to N-7. Methyl radicals are cleaved from N-, but not from S- or C-methyl groups, with the exception of the 7-methyl derivative, in which the S-CH₃-group can also split off a methyl radical. The methylthio group may lose all of the following fragments: S, SH, SCH, SCH₂ and SCH₃. In the remaining purine skeleton, in general first the pyrimidine and subsequently the imidazole ring breaks down with elimination of HCN.     

Acceleration of the corrosion reaction of magnesium by Fenton reagents

Abstract

Magnesium alloys have attracted increased attention for a variety of applications, chief among which are alternative energy and medical implants. The use of biodegradable implants in the complex system of the human body, in which myriad reactions occur, must consider the potential effects of the body’s natural chemical reactions on implant corrosion rates. The aim of this study was to elucidate the synergistic effects of pure Mg and Mg alloys on the Mg corrosion reaction with reagents that participate in the Fenton reaction. We corroborated our results with six different measurement methods (hydrogen evolution rate [HER], gas chromatography [GC], potentiodynamic polarization, inductively coupled plasma [ICP] spectrometry, Auger electron spectroscopy [AES], and scanning electron microscope [SEM]). The results point out that the corrosion and hydrogen evaluation rates of Mg were elevated by the addition of Fenton reagents, divalent iron and hydrogen peroxide, to a saline solution. In the context of Mg-based alloy medical implant development and use, this observation is significant.     

A high-performance microsystem for isolating circulating tumor cells

A unique flow field pattern in a bio-functional microchannel is utilized to significantly enhance the performance of a microsystem developed for selectively isolating circulating tumor cells from cell suspensions. For high performance of such systems, disposal of maximum non-target species is just as important as retention of maximum target species; unfortunately, most studies ignore or fail to report this aspect. Therefore, sensitivity and specificity are introduced as quantitative criteria to evaluate the system performance enabling a direct comparison among systems employing different techniques. The newly proposed fluidic scheme combines a slow flow field, for maximum target-cell attachment, followed by a faster flow field, for maximum detachment of non-target cells. Suspensions of homogeneous or binary mixtures of circulating breast tumor cells, with varying relative concentrations, were driven through antibody-functionalized microchannels. Either EpCAM or cadherin-11 transmembrane receptors were targeted to selectively capture target cells from the suspensions. Cadherin-11-expressing MDA-MB-231 cancer cells were used as target cells, while BT-20 cells were used as non-target cells as they do not express cadherin-11. The attachment and detachment of these two cell lines are characterized, and a two-step attachment/detachment flow field pattern is implemented to enhance the system performance in capturing target cells from binary mixtures. While the system sensitivity remains high, above 0.95, the specificity increases from about 0.85 to 0.95 solely due to the second detachment step even for a 1 : 1000 relative concentration of the target cells.     

A symmetry principle for topological quantum order

We present a unifying framework to study physical systems which exhibit topological quantum order (TQO). The major guiding principle behind our approach is that of symmetries and entanglement. These symmetries may be actual symmetries of the Hamiltonian characterizing the system, or emergent symmetries. To this end, we introduce the concept of low-dimensional Gauge-like symmetries (GLSs), and the physical conservation laws (including topological terms, fractionalization, and the absence of quasi-particle excitations) which emerge from them. We prove then sufficient conditions for TQO at both zero and finite temperatures. The physical engine for TQO are topological defects associated with the restoration of GLSs. These defects propagate freely through the system and enforce TQO. Our results are strongest for gapped systems with continuous GLSs. At zero temperature, selection rules associated with the GLSs enable us to systematically construct general states with TQO; these selection rules do not rely on the existence of a finite gap between the ground states to all other excited states. Indices associated with these symmetries correspond to different topological sectors. All currently known examples of TQO display GLSs. Other systems exhibiting such symmetries include Hamiltonians depicting orbital-dependent spin-exchange and Jahn-Teller effects in transition metal orbital compounds, short-range frustrated Klein spin models, and p+ip superconducting arrays. The symmetry based framework discussed herein allows us to go beyond standard topological field theories and systematically engineer new physical models with finite temperature TQO (both Abelian and non-Abelian). Furthermore, we analyze the insufficiency of entanglement entropy (we introduce SU(N) Klein models on small world networks to make the argument even sharper), spectral structures, maximal string correlators, and fractionalization in establishing TQO. We show that Kitaev’s Toric code model and Wen’s plaquette model are equivalent and reduce, by a duality mapping, to an Ising chain, demonstrating that despite the spectral gap in these systems the toric operator expectation values may vanish once thermal fluctuations are present. This illustrates the fact that the quantum states themselves in a particular (operator language) representation encode TQO and that the duality mappings, being non-local in the original representation, disentangle the order. We present a general algorithm for the construction of long-range string and brane orders in general systems with entangled ground states; this algorithm relies on general ground states selection rules and becomes of the broadest applicability in gapped systems in arbitrary dimensions. We exactly recast some known non-local string correlators in terms of local correlation functions. We discuss relations to problems in graph theory.     

Intrinsic Fluorescence of Metabolite Amyloids Allows Label‐Free Monitoring of Their Formation and Dynamics in Live Cells

The formation of apoptosis‐inducing amyloidal structures by metabolites has significantly extended the “amyloid hypothesis” to include non‐proteinaceous, single metabolite building blocks. However, detection of metabolite assemblies is restricted compared to their larger protein‐based counterparts owing to the hindrance of external labelling and limited immunohistochemical detection tools. Herein, we present the detection of the formation, dynamics, and cellular distribution of metabolite amyloid‐like structures and provide mechanistic insights into the generation of supramolecular chromophores. Moreover, the intrinsic fluorescence properties allow the detection of metabolite assemblies in living cells without the use of external dyes. Altogether, this intrinsic fluorescence of metabolite assemblies further verifies their amyloidal nature, while providing an important tool for further investigation of their pathological role in inborn error of metabolism disorders.     

Application of the Finite Cell Method to patient-specific femur simulations

Standard methods for predicting the mechanical response of a human femur bone from quantitative computer-tomography (qCT) scans are classically based on the h-version of the finite element method. These methods are often limited in accuracy and efficiency due to the need for segmentation and the slow convergence rate. With the Finite Cell Method (FCM) a high-order fictitious domain method has been developed that overcomes the aforementioned problems and provides accurate results when compared to high-order finite element methods and experimental results. Herein the FCM applied to the analysis of a patient-specific femur is presented. The femur model is determined based on qCT-scans and the elastic response under compression is presented in terms of strains and displacements. The results are compared with a p-FE analysis and validated by results from an in-vitro test of the modeled femur. (© 2011 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim)     

Photoexcited triplet-state dynamics of novel porphyrinoids: octaethylcorrphycene and octaethylhemiporphycene. Time-resolved electron paramagnetic resonance study

The photoexcited triplet state of the two new porphyrin isomers, octaethylhemiporphycene (OEHPC) and octaethylcorrphycene (OECPC), embedded in isotropic (toluene) and an anisotropic liquid crystal matrices was studied by time-resolved electron paramagnetic resonance (EPR) spectroscopy in the temperature range of 150–300 K. The magnetic, kinetic and orientation parameters were determined and interpreted in terms of structure, symmetry and dynamic. Analysis of the results suggests that at T250 K, the orientation and packing of the chromophores result from a discrete solid-like jumps mechanism, which is more efficient for OECPC. This difference is rationalized in terms of differences in the symmetry of the two chromophores.     

A one parameter fit for glassy dynamics as a quantum corollary of the liquid to solid transition

We apply microcanonical ensemble considerations to suggest that, whenever it may thermalise, a general disorder-free many-body Hamiltonian of a typical atomic system has solid-like eigenstates at low energies and fluid-type (and gaseous, plasma) eigenstates associated with energy densities exceeding those present in the melting (and, respectively, higher energy) transition(s). In particular, the lowest energy density at which the eigenstates of such a clean many body atomic system undergo a non-analytic change is that of the melting (or freezing) transition. We invoke this observation to analyse the evolution of a liquid upon supercooling (i.e. cooling rapidly enough to avoid solidification below the freezing temperature). Expanding the wavefunction of a supercooled liquid in the complete eigenbasis of the many-body Hamiltonian, only the higher energy liquid-type eigenstates contribute significantly to measurable hydrodynamic relaxations (e.g. those probed by viscosity) while static thermodynamic observables become weighted averages over both solid- and liquid-type eigenstates. Consequently, when extrapolated to low temperatures, hydrodynamic relaxation times of deeply supercooled liquids (i.e. glasses) may seem to diverge at nearly the same temperature at which the extrapolated entropy of the supercooled liquid becomes that of the solid. In this formal quantum framework, the increasingly sluggish (and spatially heterogeneous) dynamics in supercooled liquids as their temperature is lowered stems from the existence of the single non-analytic change of the eigenstates of the clean many-body Hamiltonian at the equilibrium melting transition present in low energy solid-type eigenstates. We derive a single (possibly computable) dimensionless parameter fit to the viscosity and suggest other testable predictions of our approach.